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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180039376
LLBY010060340
181635
Bacteroidota
TAG
Leu
>WENV180039991
LLBY010280481
464140
Bacteroidota
GCC
Gly
>WENV180039093
LLBY010026395
458439
Bacteroidota
TTT
Lys
>WENV180039094
LLBY010026395
458439
Bacteroidota
TTT
Lys
>WENV180038924
LLBY010013101
72832
Bacteroidota
TAA
Leu
>WENV180039416
LLBY010066566
653934
Bacteroidota
TTC
Glu
>WENV180039185
LLBY010034847
184600
Bacteroidota
TAG
Leu
>WENV180038682
LLBY010001815
456414
Bacteroidota
GAA
Phe
>WENV180039419
LLBY010067868
657523
Bacteroidota
TTC
Glu
>WENV180038697
LLBY010002354
241614
Bacteroidota
GAC
Val
>WENV180038973
LLBY010017309
241622
Bacteroidota
TAC
Val
>WENV180038584
LLBY010000084
452741
Bacteroidota
TCC
Gly
>WENV180038691
LLBY010002258
452741
Bacteroidota
TCC
Gly
>WENV180038693
LLBY010002258
452487
Bacteroidota
CCA
Trp
>WENV180039100
LLBY010026774
277303
Bacteroidota
TGT
Thr
>WENV180039333
LLBY010052632
277303
Bacteroidota
TGT
Thr
>WENV180040049
LLBY010342926
782390
Bacteroidota
TTG
Gln
>WENV180039165
LLBY010031251
280682
Bacteroidota
TGT
Thr
>WENV180039166
LLBY010031251
280682
Bacteroidota
TGT
Thr
>WENV180039433
LLBY010070275
280682
Bacteroidota
TGT
Thr
>WENV180038923
LLBY010013101
454691
Bacteroidota
GCC
Gly
>WENV180038587
LLBY010000236
293748
Bacteroidota
TCT
Arg
>WENV180040147
LLBY010418300
293748
Bacteroidota
TCT
Arg
>WENV180038832
LLBY010007674
655825
Bacteroidota
TTC
Glu
>WENV180039414
LLBY010066566
667698
Bacteroidota
TTC
Glu
>WENV180039415
LLBY010066566
667698
Bacteroidota
TTC
Glu
>WENV180038892
LLBY010011157
273589
Bacteroidota
CAT
Met
>WENV180038959
LLBY010015457
273589
Bacteroidota
CAT
Met
>WENV180039766
LLBY010154584
285078
Bacteroidota
CAT
Met
>WENV180038696
LLBY010002354
241721
Bacteroidota
TAC
Val
>WENV180038646
LLBY010001035
299450
Bacteroidota
GTT
Asn
>WENV180040000
LLBY010284888
276305
Bacteroidota
CAT
Met
>WENV180038607
LLBY010000595
271511
Bacteroidota
GTC
Asp
>WENV180039349
LLBY010055639
307654
Bacteroidota
GGC
Ala
>WENV180039523
LLBY010085970
307654
Bacteroidota
GGC
Ala
>WENV180038583
LLBY010000082
86958
Bacteroidota
TGA
Ser
>WENV180039130
LLBY010028990
460717
Bacteroidota
TTT
Lys
>WENV180039131
LLBY010028990
460717
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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