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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
91 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180132179
OATH01002113
87216
Actinomycetota
CGA
Ser
>WENV180132256
OATH01004634
455014
Actinomycetota
CCG
Arg
>WENV180132244
OATH01003607
30527
Actinomycetota
GAG
Leu
>WENV180131809
OATH01000131
180100
Actinomycetota
GTA
Tyr
>WENV180132200
OATH01002447
270710
Actinomycetota
CAT
Met
>WENV180131702
OATH01000037
451412
Actinomycetota
GTT
Asn
>WENV180131708
OATH01000037
451412
Actinomycetota
GTT
Asn
>WENV180131707
OATH01000037
271422
Actinomycetota
GGG
Pro
>WENV180132223
OATH01002907
455012
Actinomycetota
CCT
Arg
>WENV180132018
OATH01000726
274917
Actinomycetota
TAC
Val
>WENV180132149
OATH01001667
451381
Actinomycetota
CGT
Thr
>WENV180131987
OATH01000586
451359
Actinomycetota
TTT
Lys
>WENV180131812
OATH01000131
30276
Actinomycetota
GCT
Ser
>WENV180131808
OATH01000129
30281
Actinomycetota
GAG
Leu
>WENV180131997
OATH01000643
270486
Actinomycetota
CGG
Pro
>WENV180131701
OATH01000037
451442
Actinomycetota
GGC
Ala
>WENV180131832
OATH01000168
451442
Actinomycetota
GGC
Ala
>WENV180131912
OATH01000328
270467
Actinomycetota
TGG
Pro
>WENV180132239
OATH01003402
653478
Actinomycetota
CCA
Trp
>WENV180132132
OATH01001491
454262
Actinomycetota
GTT
Asn
>WENV180132162
OATH01001813
454262
Actinomycetota
GTT
Asn
>WENV180132177
OATH01002104
454262
Actinomycetota
GTT
Asn
>WENV180132261
OATH01005142
454262
Actinomycetota
GTT
Asn
>WENV180132041
OATH01000844
451659
Actinomycetota
CCT
Arg
>WENV180131998
OATH01000647
86856
Actinomycetota
TGA
Ser
>WENV180131979
OATH01000523
228568
Actinomycetota
TAA
Leu
>WENV180132210
OATH01002767
273894
Actinomycetota
TAC
Val
>WENV180132227
OATH01003141
455013
Actinomycetota
GTG
His
>WENV180131982
OATH01000541
451655
Actinomycetota
CCA
Trp
>WENV180132180
OATH01002116
451655
Actinomycetota
CCA
Trp
>WENV180132260
OATH01005139
451655
Actinomycetota
CCA
Trp
>WENV180131810
OATH01000131
271229
Actinomycetota
CAT
Met
>WENV180132187
OATH01002214
451474
Actinomycetota
CAC
Val
>WENV180132253
OATH01004544
451474
Actinomycetota
CAC
Val
>WENV180132122
OATH01001371
284684
Actinomycetota
TCT
Arg
>WENV180132249
OATH01004254
87217
Actinomycetota
TGA
Ser
>WENV180132150
OATH01001667
217997
Actinomycetota
TAG
Leu
>WENV180131815
OATH01000136
653368
Actinomycetota
CTG
Gln
>WENV180132045
OATH01000859
653368
Actinomycetota
CTG
Gln
>WENV180132212
OATH01002778
653368
Actinomycetota
CTG
Gln
>WENV180131835
OATH01000171
270411
Actinomycetota
ACG
Arg
>WENV180131836
OATH01000171
270411
Actinomycetota
ACG
Arg
>WENV180132011
OATH01000698
451349
Actinomycetota
CCG
Arg
>WENV180132069
OATH01000899
451413
Actinomycetota
CCT
Arg
>WENV180131704
OATH01000037
779447
Actinomycetota
GCA
Cys
>WENV180131983
OATH01000552
270415
Actinomycetota
TAT
Ile
>WENV180132105
OATH01001225
86870
Actinomycetota
CGA
Ser
>WENV180132145
OATH01001595
270422
Actinomycetota
TGG
Pro
>WENV180132292
OATH01017890
232508
Actinomycetota
TAA
Leu
>WENV180131911
OATH01000328
270417
Actinomycetota
CAA
Leu
>WENV180132167
OATH01001923
270417
Actinomycetota
CAA
Leu
>WENV180132248
OATH01004240
270417
Actinomycetota
CAA
Leu
>WENV180132204
OATH01002517
779382
Actinomycetota
TTG
Gln
>WENV180132196
OATH01002326
779446
Actinomycetota
CCC
Gly
>WENV180131833
OATH01000168
270403
Actinomycetota
TGT
Thr
>WENV180132130
OATH01001453
270403
Actinomycetota
TGT
Thr
>WENV180132163
OATH01001848
218122
Actinomycetota
TAA
Leu
>WENV180132175
OATH01002078
86861
Actinomycetota
TGA
Ser
>WENV180131811
OATH01000131
72674
Actinomycetota
CGA
Ser
>WENV180132134
OATH01001497
653819
Actinomycetota
TTC
Glu
>WENV180131705
OATH01000037
653353
Actinomycetota
GAC
Val
>WENV180132186
OATH01002214
653353
Actinomycetota
GAC
Val
>WENV180132189
OATH01002280
653353
Actinomycetota
GAC
Val
>WENV180132299
OATH01018520
653353
Actinomycetota
GAC
Val
>WENV180132133
OATH01001497
270451
Actinomycetota
GTC
Asp
>WENV180132135
OATH01001497
270451
Actinomycetota
GTC
Asp
>WENV180132251
OATH01004409
273896
Actinomycetota
CAT
Met
>WENV180132102
OATH01001163
270707
Actinomycetota
GAT
Ile
>WENV180132037
OATH01000832
153767
Actinomycetota
CAG
Leu
>WENV180131709
OATH01000037
451432
Actinomycetota
GTT
Asn
>WENV180132176
OATH01002082
451469
Actinomycetota
GTG
His
>WENV180132046
OATH01000859
86885
Actinomycetota
GGA
Ser
>WENV180132141
OATH01001560
270498
Actinomycetota
TAC
Val
>WENV180132148
OATH01001628
452352
Actinomycetota
GTG
His
>WENV180131866
OATH01000242
779392
Actinomycetota
CCC
Gly
>WENV180132036
OATH01000832
779392
Actinomycetota
CCC
Gly
>WENV180132087
OATH01001059
270708
Actinomycetota
CTT
Lys
>WENV180132159
OATH01001717
270708
Actinomycetota
CTT
Lys
>WENV180132147
OATH01001627
653480
Actinomycetota
TTC
Glu
>WENV180132226
OATH01003084
653480
Actinomycetota
TTC
Glu
>WENV180132143
OATH01001578
270545
Actinomycetota
CAT
Met
>WENV180131831
OATH01000168
451443
Actinomycetota
TGC
Ala
>WENV180132068
OATH01000884
451443
Actinomycetota
TGC
Ala
>WENV180132103
OATH01001163
451443
Actinomycetota
TGC
Ala
>WENV180131814
OATH01000136
451402
Actinomycetota
CTC
Glu
>WENV180132170
OATH01001958
270705
Actinomycetota
TCT
Arg
>WENV180132224
OATH01003001
270705
Actinomycetota
TCT
Arg
>WENV180132198
OATH01002389
451657
Actinomycetota
GGC
Ala
>WENV180132199
OATH01002389
451657
Actinomycetota
GGC
Ala
>WENV180132142
OATH01001578
179947
Actinomycetota
GTA
Tyr
>WENV180132259
OATH01005069
179947
Actinomycetota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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