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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180131808
OATH01000129
35846
Actinomycetota
GAG
Leu
>WENV180131810
OATH01000131
305628
Actinomycetota
CAT
Met
>WENV180132041
OATH01000844
508588
Actinomycetota
CCT
Arg
>WENV180132256
OATH01004634
508870
Actinomycetota
CCG
Arg
>WENV180131911
OATH01000328
306398
Actinomycetota
CAA
Leu
>WENV180132167
OATH01001923
306398
Actinomycetota
CAA
Leu
>WENV180132248
OATH01004240
306398
Actinomycetota
CAA
Leu
>WENV180132143
OATH01001578
305610
Actinomycetota
CAT
Met
>WENV180132292
OATH01017890
263190
Actinomycetota
TAA
Leu
>WENV180132145
OATH01001595
306400
Actinomycetota
TGG
Pro
>WENV180132251
OATH01004409
306620
Actinomycetota
>WENV180132163
OATH01001848
247220
Actinomycetota
TAA
Leu
>WENV180131998
OATH01000647
100162
Actinomycetota
TGA
Ser
>WENV180132223
OATH01002907
507708
Actinomycetota
CCT
Arg
>WENV180131835
OATH01000171
305631
Actinomycetota
ACG
Arg
>WENV180131836
OATH01000171
305631
Actinomycetota
ACG
Arg
>WENV180132239
OATH01003402
736268
Actinomycetota
CCA
Trp
>WENV180131975
OATH01000500
266270
Actinomycetota
ACG
Arg
>WENV180132227
OATH01003141
514011
Actinomycetota
GTG
His
>WENV180132249
OATH01004254
100064
Actinomycetota
TGA
Ser
>WENV180132170
OATH01001958
306397
Actinomycetota
TCT
Arg
>WENV180132224
OATH01003001
306397
Actinomycetota
TCT
Arg
>WENV180132176
OATH01002082
508587
Actinomycetota
GTG
His
>WENV180132018
OATH01000726
309250
Actinomycetota
TAC
Val
>WENV180132196
OATH01002326
871333
Actinomycetota
CCC
Gly
>WENV180132133
OATH01001497
309728
Actinomycetota
GTC
Asp
>WENV180132135
OATH01001497
309728
Actinomycetota
GTC
Asp
>WENV180131809
OATH01000131
205551
Actinomycetota
GTA
Tyr
>WENV180132037
OATH01000832
174283
Actinomycetota
CAG
Leu
>WENV180132198
OATH01002389
510644
Actinomycetota
GGC
Ala
>WENV180132199
OATH01002389
510644
Actinomycetota
GGC
Ala
>WENV180132210
OATH01002767
305638
Actinomycetota
TAC
Val
>WENV180132179
OATH01002113
100065
Actinomycetota
CGA
Ser
>WENV180131709
OATH01000037
515072
Actinomycetota
GTT
Asn
>WENV180132134
OATH01001497
732518
Actinomycetota
TTC
Glu
>WENV180132102
OATH01001163
305613
Actinomycetota
GAT
Ile
>WENV180132087
OATH01001059
305625
Actinomycetota
CTT
Lys
>WENV180132159
OATH01001717
305625
Actinomycetota
CTT
Lys
>WENV180132244
OATH01003607
36025
Actinomycetota
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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