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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1016088
SRR023846.342990
180432
Betaproteobacteria
CAA
Leu
>SRA1015975
SRR023846.291949
273484
Betaproteobacteria
TTG
Gln
>SRA1015788
SRR023846.200981
273487
Betaproteobacteria
TGG
Pro
>SRA1016479
SRR023846.522768
273487
Betaproteobacteria
TGG
Pro
>SRA1015773
SRR023846.193359
454455
Betaproteobacteria
CCG
Arg
>SRA1015914
SRR023846.259194
454455
Betaproteobacteria
CCG
Arg
>SRA1016391
SRR023846.477627
454455
Betaproteobacteria
CCG
Arg
>SRA1015335
SRR023846.21796
452595
Betaproteobacteria
GTT
Asn
>SRA1016090
SRR023846.343338
452595
Betaproteobacteria
GTT
Asn
>SRA1016148
SRR023846.369740
457359
Betaproteobacteria
TTT
Lys
>SRA1015552
SRR023846.108504
180358
Betaproteobacteria
CAG
Leu
>SRA1016503
SRR023846.534704
180358
Betaproteobacteria
CAG
Leu
>SRA1016175
SRR023846.380322
273391
Betaproteobacteria
TTG
Gln
>SRA1015670
SRR023846.152101
273483
Betaproteobacteria
ACG
Arg
>SRA1016032
SRR023846.317459
180403
Betaproteobacteria
GAG
Leu
>SRA1016495
SRR023846.530639
180403
Betaproteobacteria
GAG
Leu
>SRA1015412
SRR023846.49370
273481
Betaproteobacteria
GGG
Pro
>SRA1016098
SRR023846.348132
273481
Betaproteobacteria
GGG
Pro
>SRA1015363
SRR023846.30547
780144
Betaproteobacteria
GCA
Cys
>SRA1016393
SRR023846.478524
525560
Betaproteobacteria
GCC
Gly
>SRA1016394
SRR023846.478524
525560
Betaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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