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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170015534
AZIH01003443
170011
Gammaproteobacteria
CCG
Arg
>WENV170015622
AZIH01012170
18367
Gammaproteobacteria
GCT
Ser
>WENV170015517
AZIH01002610
188985
Gammaproteobacteria
CAT
Met
>WENV170015510
AZIH01001814
191632
Gammaproteobacteria
>WENV170015564
AZIH01005141
191632
Gammaproteobacteria
>WENV170015524
AZIH01002893
105852
Gammaproteobacteria
GAG
Leu
>WENV170015604
AZIH01010624
68241
Gammaproteobacteria
CAG
Leu
>WENV170015600
AZIH01009696
263230
Gammaproteobacteria
TTT
Lys
>WENV170015529
AZIH01003071
190005
Gammaproteobacteria
ACG
Arg
>WENV170015530
AZIH01003071
190005
Gammaproteobacteria
ACG
Arg
>WENV170015528
AZIH01003071
28463
Gammaproteobacteria
GCT
Ser
>WENV170015561
AZIH01005104
370728
Gammaproteobacteria
TCC
Gly
>WENV170015628
AZIH01012673
160668
Gammaproteobacteria
CAT
Met
>WENV170015521
AZIH01002863
170822
Gammaproteobacteria
CCG
Arg
>WENV170015602
AZIH01010247
65163
Gammaproteobacteria
CAA
Leu
>WENV170015497
AZIH01001364
272540
Gammaproteobacteria
GTT
Asn
>WENV170015560
AZIH01005104
126541
Gammaproteobacteria
GTA
Tyr
>WENV170015592
AZIH01008594
256945
Gammaproteobacteria
GAA
Phe
>WENV170015595
AZIH01008938
256945
Gammaproteobacteria
GAA
Phe
>WENV170015506
AZIH01001793
193317
Gammaproteobacteria
TGG
Pro
>WENV170015553
AZIH01004615
160836
Gammaproteobacteria
GAC
Val
>WENV170015519
AZIH01002610
174513
Gammaproteobacteria
CAT
Met
>WENV170015547
AZIH01004261
282654
Gammaproteobacteria
GGC
Ala
>WENV170015596
AZIH01008978
161939
Gammaproteobacteria
GAC
Val
>WENV170015591
AZIH01008181
52896
Gammaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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