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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170015529
AZIH01003071
158396
Gammaproteobacteria
ACG
Arg
>WENV170015530
AZIH01003071
158396
Gammaproteobacteria
ACG
Arg
>WENV170015535
AZIH01003474
277725
Gammaproteobacteria
TAC
Val
>WENV170015537
AZIH01003474
277725
Gammaproteobacteria
TAC
Val
>WENV170015600
AZIH01009696
279385
Gammaproteobacteria
TTT
Lys
>WENV170015584
AZIH01006525
145368
Gammaproteobacteria
CCT
Arg
>WENV170015574
AZIH01005443
58822
Gammaproteobacteria
CAA
Leu
>WENV170015526
AZIH01002957
145367
Gammaproteobacteria
GGG
Pro
>WENV170015595
AZIH01008938
235452
Gammaproteobacteria
GAA
Phe
>WENV170015592
AZIH01008594
235452
Gammaproteobacteria
GAA
Phe
>WENV170015587
AZIH01007064
240619
Gammaproteobacteria
TGT
Thr
>WENV170015561
AZIH01005104
341109
Gammaproteobacteria
TCC
Gly
>WENV170015596
AZIH01008978
146791
Gammaproteobacteria
GAC
Val
>WENV170015598
AZIH01009299
16284
Gammaproteobacteria
TGA
Ser
>WENV170015498
AZIH01001364
159514
Gammaproteobacteria
TGG
Pro
>WENV170015608
AZIH01011094
174801
Gammaproteobacteria
TGG
Pro
>WENV170015484
AZIH01000062
185155
Gammaproteobacteria
CAT
Met
>WENV170015588
AZIH01007191
98737
Gammaproteobacteria
GAG
Leu
>WENV170015564
AZIH01005141
158933
Gammaproteobacteria
CAT
Met
>WENV170015510
AZIH01001814
158933
Gammaproteobacteria
CAT
Met
>WENV170015553
AZIH01004615
145365
Gammaproteobacteria
GAC
Val
>WENV170015497
AZIH01001364
249882
Gammaproteobacteria
GTT
Asn
>WENV170015549
AZIH01004272
241136
Gammaproteobacteria
TTG
Gln
>WENV170015572
AZIH01005442
235886
Gammaproteobacteria
TTC
Glu
>WENV170015550
AZIH01004369
235886
Gammaproteobacteria
TTC
Glu
>WENV170015541
AZIH01003609
235886
Gammaproteobacteria
TTC
Glu
>WENV170015506
AZIH01001793
186449
Gammaproteobacteria
TGG
Pro
>WENV170015557
AZIH01004921
243921
Gammaproteobacteria
TTT
Lys
>WENV170015555
AZIH01004617
243921
Gammaproteobacteria
TTT
Lys
>WENV170015554
AZIH01004617
243921
Gammaproteobacteria
TTT
Lys
>WENV170015514
AZIH01002312
411735
Gammaproteobacteria
GCA
Cys
>WENV170015502
AZIH01001422
411735
Gammaproteobacteria
GCA
Cys
>WENV170015628
AZIH01012673
175964
Gammaproteobacteria
CAT
Met
>WENV170015507
AZIH01001793
150297
Gammaproteobacteria
TCT
Arg
>WENV170015495
AZIH01000734
190809
Gammaproteobacteria
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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