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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170018871
BBPD01001717
152292
Betaproteobacteria
TTG
Gln
>WENV170018760
BBPD01000726
145694
Betaproteobacteria
ACG
Arg
>WENV170018947
BBPD01002423
145694
Betaproteobacteria
ACG
Arg
>WENV170019258
BBPD01006858
145694
Betaproteobacteria
ACG
Arg
>WENV170018925
BBPD01002158
154789
Betaproteobacteria
CAT
Met
>WENV170018779
BBPD01000853
172608
Betaproteobacteria
TTG
Gln
>WENV170018857
BBPD01001601
59352
Betaproteobacteria
TAG
Leu
>WENV170018859
BBPD01001601
412167
Betaproteobacteria
GCA
Cys
>WENV170018910
BBPD01002033
85133
Betaproteobacteria
GTA
Tyr
>WENV170018750
BBPD01000658
85133
Betaproteobacteria
GTA
Tyr
>WENV170018785
BBPD01000890
99249
Betaproteobacteria
CAA
Leu
>WENV170018722
BBPD01000507
292518
Betaproteobacteria
TTT
Lys
>WENV170018708
BBPD01000456
292518
Betaproteobacteria
TTT
Lys
>WENV170018761
BBPD01000752
270881
Betaproteobacteria
TGT
Thr
>WENV170018984
BBPD01002843
154591
Betaproteobacteria
CAT
Met
>WENV170018690
BBPD01000373
154591
Betaproteobacteria
CAT
Met
>WENV170018784
BBPD01000890
235457
Betaproteobacteria
CGT
Thr
>WENV170019259
BBPD01006859
147666
Betaproteobacteria
CAT
Met
>WENV170018795
BBPD01001031
239140
Betaproteobacteria
TTT
Lys
>WENV170018757
BBPD01000689
417724
Betaproteobacteria
CCC
Gly
>WENV170018733
BBPD01000596
254339
Betaproteobacteria
GTG
His
>WENV170019354
BBPD01009019
185916
Betaproteobacteria
CAT
Met
>WENV170018752
BBPD01000671
185916
Betaproteobacteria
CAT
Met
>WENV170018719
BBPD01000496
105933
Betaproteobacteria
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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