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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170018690
BBPD01000373
161359
Betaproteobacteria
CAT
Met
>WENV170018984
BBPD01002843
161359
Betaproteobacteria
CAT
Met
>WENV170019259
BBPD01006859
161359
Betaproteobacteria
CAT
Met
>WENV170018761
BBPD01000752
271342
Betaproteobacteria
TGT
Thr
>WENV170018565
BBPD01000009
8103
Betaproteobacteria
GCT
Ser
>WENV170018671
BBPD01000308
8103
Betaproteobacteria
GCT
Ser
>WENV170018919
BBPD01002084
8103
Betaproteobacteria
GCT
Ser
>WENV170019136
BBPD01004515
8103
Betaproteobacteria
GCT
Ser
>WENV170018779
BBPD01000853
170679
Betaproteobacteria
TTG
Gln
>WENV170018840
BBPD01001379
171167
Betaproteobacteria
TCT
Arg
>WENV170018841
BBPD01001380
171167
Betaproteobacteria
TCT
Arg
>WENV170018896
BBPD01001940
453387
Betaproteobacteria
GCA
Cys
>WENV170019019
BBPD01003081
452007
Betaproteobacteria
GCA
Cys
>WENV170018859
BBPD01001601
454378
Betaproteobacteria
GCA
Cys
>WENV170018871
BBPD01001717
167755
Betaproteobacteria
TTG
Gln
>WENV170018784
BBPD01000890
261323
Betaproteobacteria
CGT
Thr
>WENV170019102
BBPD01003826
277354
Betaproteobacteria
GTT
Asn
>WENV170019146
BBPD01004695
277354
Betaproteobacteria
GTT
Asn
>WENV170018621
BBPD01000150
277354
Betaproteobacteria
GTT
Asn
>WENV170018694
BBPD01000405
260287
Betaproteobacteria
TTC
Glu
>WENV170019184
BBPD01005444
280460
Betaproteobacteria
TTT
Lys
>WENV170018733
BBPD01000596
257521
Betaproteobacteria
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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