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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170026307
CDTW01032786
167053
Bacillota
GTG
His
>WENV170026253
CDTW01028759
294027
Bacillota
TTT
Lys
>WENV170026309
CDTW01032786
294027
Bacillota
TTT
Lys
>WENV170026319
CDTW01033856
369809
Bacillota
CTC
Glu
>WENV170025940
CDTW01004530
161902
Bacillota
CAT
Met
>WENV170026305
CDTW01032786
143511
Bacillota
TGG
Pro
>WENV170026318
CDTW01033856
324836
Bacillota
CTT
Lys
>WENV170026537
CDTW01048334
162688
Bacillota
GAT
Ile
>WENV170026567
CDTW01051243
162688
Bacillota
GAT
Ile
>WENV170026110
CDTW01017300
161895
Bacillota
GAC
Val
>WENV170026367
CDTW01036732
106802
Bacillota
GTA
Tyr
>WENV170026127
CDTW01018622
159237
Bacillota
TCT
Arg
>WENV170026122
CDTW01018242
374673
Bacillota
CTC
Glu
>WENV170026091
CDTW01015668
158271
Bacillota
CCT
Arg
>WENV170025979
CDTW01007585
369393
Bacillota
TTC
Glu
>WENV170026040
CDTW01012689
56553
Bacillota
CAG
Leu
>WENV170026274
CDTW01031062
56553
Bacillota
CAG
Leu
>WENV170026275
CDTW01031062
56553
Bacillota
CAG
Leu
>WENV170026244
CDTW01028743
166292
Bacillota
GAT
Ile
>WENV170026532
CDTW01047987
258126
Bacillota
GCC
Gly
>WENV170026410
CDTW01039249
450457
Bacillota
CTG
Gln
>WENV170026333
CDTW01034670
162605
Bacillota
CCT
Arg
>WENV170026243
CDTW01028743
320672
Bacillota
TGC
Ala
>WENV170026353
CDTW01036324
167205
Bacillota
TAC
Val
>WENV170026523
CDTW01047918
167205
Bacillota
TAC
Val
>WENV170026459
CDTW01042141
182424
Bacillota
CAT
Met
>WENV170026028
CDTW01011876
261310
Bacillota
CGT
Thr
>WENV170025868
CDTW01000001
371445
Bacillota
>WENV170026105
CDTW01016923
258131
Bacillota
TGT
Thr
>WENV170026366
CDTW01036732
258131
Bacillota
TGT
Thr
>WENV170026128
CDTW01018622
159238
Bacillota
GTG
His
>WENV170026111
CDTW01017342
369391
Bacillota
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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