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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170025940
CDTW01004530
202812
Bacillota
CAT
Met
>WENV170026127
CDTW01018622
144612
Bacillota
TCT
Arg
>WENV170026298
CDTW01032785
429443
Bacillota
GCA
Cys
>WENV170025987
CDTW01008264
307003
Bacillota
TGC
Ala
>WENV170025880
CDTW01000875
169927
Bacillota
GTC
Asp
>WENV170026383
CDTW01037856
169927
Bacillota
GTC
Asp
>WENV170026307
CDTW01032786
156937
Bacillota
GTG
His
>WENV170026582
CDTW01051714
37269
Bacillota
TGA
Ser
>WENV170026559
CDTW01050478
287000
Bacillota
GTT
Asn
>WENV170026251
CDTW01028759
169968
Bacillota
CAT
Met
>WENV170026312
CDTW01032786
147684
Bacillota
ACG
Arg
>WENV170026450
CDTW01041773
263765
Bacillota
TAC
Val
>WENV170026419
CDTW01039697
313104
Bacillota
TAC
Val
>WENV170026493
CDTW01045951
18852
Bacillota
GCT
Ser
>WENV170026524
CDTW01047918
163943
Bacillota
GTC
Asp
>WENV170026354
CDTW01036324
163943
Bacillota
GTC
Asp
>WENV170026002
CDTW01009235
163943
Bacillota
GTC
Asp
>WENV170026318
CDTW01033856
310822
Bacillota
CTT
Lys
>WENV170026540
CDTW01048606
247734
Bacillota
TGC
Ala
>WENV170025919
CDTW01002925
248965
Bacillota
GCC
Gly
>WENV170025910
CDTW01002191
248965
Bacillota
GCC
Gly
>WENV170026389
CDTW01037856
157105
Bacillota
GAT
Ile
>WENV170025979
CDTW01007585
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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