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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
138 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170028591
CDYF01006672
235097
Bacteroidota
TTT
Lys
>WENV170028655
CDYF01010587
235097
Bacteroidota
TTT
Lys
>WENV170028948
CDYF01024434
235102
Bacteroidota
CGT
Thr
>WENV170028764
CDYF01015263
267954
Bacteroidota
GCC
Gly
>WENV170029148
CDYF01033006
146761
Bacteroidota
GAT
Ile
>WENV170028914
CDYF01023597
144657
Bacteroidota
CGG
Pro
>WENV170028697
CDYF01012587
243025
Bacteroidota
CAT
Met
>WENV170028745
CDYF01014399
243025
Bacteroidota
CAT
Met
>WENV170028954
CDYF01024610
338155
Bacteroidota
CTC
Glu
>WENV170028653
CDYF01010579
153993
Bacteroidota
GAT
Ile
>WENV170028712
CDYF01013149
339341
Bacteroidota
GGT
Thr
>WENV170029250
CDYF01036038
343138
Bacteroidota
CCT
Arg
>WENV170028942
CDYF01024201
58715
Bacteroidota
GAG
Leu
>WENV170028581
CDYF01005807
58715
Bacteroidota
GAG
Leu
>WENV170028970
CDYF01025626
24174
Bacteroidota
GCT
Ser
>WENV170029103
CDYF01030835
338486
Bacteroidota
CAT
Met
>WENV170029069
CDYF01029762
338486
Bacteroidota
CAT
Met
>WENV170029035
CDYF01028357
338486
Bacteroidota
CAT
Met
>WENV170029015
CDYF01027736
338486
Bacteroidota
CAT
Met
>WENV170029014
CDYF01027736
338486
Bacteroidota
CAT
Met
>WENV170029258
CDYF01036895
59689
Bacteroidota
CAG
Leu
>WENV170028580
CDYF01005807
59689
Bacteroidota
CAG
Leu
>WENV170028838
CDYF01019454
436206
Bacteroidota
TTG
Gln
>WENV170028786
CDYF01016365
436206
Bacteroidota
TTG
Gln
>WENV170028784
CDYF01016168
436206
Bacteroidota
TTG
Gln
>WENV170028652
CDYF01010577
436206
Bacteroidota
TTG
Gln
>WENV170029285
CDYF01038423
20893
Bacteroidota
GGA
Ser
>WENV170028566
CDYF01004929
20893
Bacteroidota
GGA
Ser
>WENV170028538
CDYF01003804
20893
Bacteroidota
GGA
Ser
>WENV170029050
CDYF01028697
344692
Bacteroidota
GGT
Thr
>WENV170028665
CDYF01011129
145504
Bacteroidota
TGT
Thr
>WENV170028680
CDYF01011675
145504
Bacteroidota
TGT
Thr
>WENV170028853
CDYF01020039
338124
Bacteroidota
CCG
Arg
>WENV170029266
CDYF01036921
235203
Bacteroidota
TTT
Lys
>WENV170028597
CDYF01006902
235203
Bacteroidota
TTT
Lys
>WENV170029144
CDYF01032739
238121
Bacteroidota
CTT
Lys
>WENV170028552
CDYF01004094
238121
Bacteroidota
CTT
Lys
>WENV170028551
CDYF01004094
238121
Bacteroidota
CTT
Lys
>WENV170028490
CDYF01001718
238121
Bacteroidota
CTT
Lys
>WENV170028489
CDYF01001718
238121
Bacteroidota
CTT
Lys
>WENV170028488
CDYF01001718
238121
Bacteroidota
CTT
Lys
>WENV170028572
CDYF01005246
126641
Bacteroidota
TAC
Val
>WENV170029122
CDYF01031517
338132
Bacteroidota
GCA
Cys
>WENV170029049
CDYF01028680
338132
Bacteroidota
GCA
Cys
>WENV170028798
CDYF01017110
338132
Bacteroidota
GCA
Cys
>WENV170028762
CDYF01015227
338132
Bacteroidota
GCA
Cys
>WENV170028542
CDYF01004001
338132
Bacteroidota
GCA
Cys
>WENV170028553
CDYF01004094
45423
Bacteroidota
TGA
Ser
>WENV170029066
CDYF01029530
193809
Bacteroidota
CAT
Met
>WENV170028832
CDYF01019120
58714
Bacteroidota
CAA
Leu
>WENV170028531
CDYF01003676
280660
Bacteroidota
CCA
Trp
>WENV170029260
CDYF01036900
301449
Bacteroidota
CGG
Pro
>WENV170028906
CDYF01023069
301449
Bacteroidota
CGG
Pro
>WENV170028809
CDYF01017465
301449
Bacteroidota
CGG
Pro
>WENV170028736
CDYF01014099
301449
Bacteroidota
CGG
Pro
>WENV170028699
CDYF01012784
301449
Bacteroidota
CGG
Pro
>WENV170028773
CDYF01015785
144933
Bacteroidota
TCT
Arg
>WENV170029177
CDYF01034170
144933
Bacteroidota
TCT
Arg
>WENV170028892
CDYF01022012
144656
Bacteroidota
GTG
His
>WENV170028780
CDYF01016163
235207
Bacteroidota
CAT
Met
>WENV170029151
CDYF01033037
143169
Bacteroidota
GGG
Pro
>WENV170028889
CDYF01021485
143169
Bacteroidota
GGG
Pro
>WENV170028621
CDYF01008453
143169
Bacteroidota
GGG
Pro
>WENV170028901
CDYF01022786
144659
Bacteroidota
GTG
His
>WENV170028900
CDYF01022786
144659
Bacteroidota
GTG
His
>WENV170028899
CDYF01022786
144659
Bacteroidota
GTG
His
>WENV170028454
CDYF01000114
144659
Bacteroidota
GTG
His
>WENV170028453
CDYF01000114
144659
Bacteroidota
GTG
His
>WENV170028693
CDYF01012326
235180
Bacteroidota
CCA
Trp
>WENV170028910
CDYF01023270
80607
Bacteroidota
GTA
Tyr
>WENV170028730
CDYF01013805
80607
Bacteroidota
GTA
Tyr
>WENV170028510
CDYF01002694
80607
Bacteroidota
GTA
Tyr
>WENV170028504
CDYF01002681
80607
Bacteroidota
GTA
Tyr
>WENV170028895
CDYF01022521
113604
Bacteroidota
>WENV170028775
CDYF01015904
16999
Bacteroidota
GGA
Ser
>WENV170028974
CDYF01025851
80614
Bacteroidota
>WENV170028711
CDYF01013149
80614
Bacteroidota
>WENV170028705
CDYF01012962
80614
Bacteroidota
>WENV170028638
CDYF01009639
80614
Bacteroidota
>WENV170028625
CDYF01008523
80614
Bacteroidota
>WENV170028515
CDYF01002739
80614
Bacteroidota
>WENV170029214
CDYF01035174
154643
Bacteroidota
CAT
Met
>WENV170029139
CDYF01032529
154643
Bacteroidota
CAT
Met
>WENV170029020
CDYF01027754
154643
Bacteroidota
CAT
Met
>WENV170028978
CDYF01026155
144590
Bacteroidota
GTT
Asn
>WENV170028977
CDYF01026155
144590
Bacteroidota
GTT
Asn
>WENV170028976
CDYF01026155
144590
Bacteroidota
GTT
Asn
>WENV170028508
CDYF01002694
144590
Bacteroidota
GTT
Asn
>WENV170028507
CDYF01002694
144590
Bacteroidota
GTT
Asn
>WENV170028506
CDYF01002694
144590
Bacteroidota
GTT
Asn
>WENV170028505
CDYF01002694
144590
Bacteroidota
GTT
Asn
>WENV170028788
CDYF01016499
95559
Bacteroidota
TAG
Leu
>WENV170029249
CDYF01036038
338164
Bacteroidota
TTC
Glu
>WENV170029248
CDYF01036038
338164
Bacteroidota
TTC
Glu
>WENV170028787
CDYF01016433
338164
Bacteroidota
TTC
Glu
>WENV170028887
CDYF01021336
95875
Bacteroidota
TAG
Leu
>WENV170028733
CDYF01014041
95875
Bacteroidota
TAG
Leu
>WENV170028797
CDYF01017109
139743
Bacteroidota
GGG
Pro
>WENV170029215
CDYF01035178
240012
Bacteroidota
CCC
Gly
>WENV170029007
CDYF01027623
240012
Bacteroidota
CCC
Gly
>WENV170029075
CDYF01030040
44852
Bacteroidota
TAA
Leu
>WENV170029281
CDYF01038305
147439
Bacteroidota
TCT
Arg
>WENV170028472
CDYF01001373
338165
Bacteroidota
GGT
Thr
>WENV170029255
CDYF01036582
19528
Bacteroidota
GGA
Ser
>WENV170029165
CDYF01033632
425638
Bacteroidota
CTG
Gln
>WENV170029155
CDYF01033041
425638
Bacteroidota
CTG
Gln
>WENV170029146
CDYF01032760
425638
Bacteroidota
CTG
Gln
>WENV170028882
CDYF01021222
425638
Bacteroidota
CTG
Gln
>WENV170028499
CDYF01002380
425638
Bacteroidota
CTG
Gln
>WENV170028523
CDYF01003103
19317
Bacteroidota
GGA
Ser
>WENV170028549
CDYF01004046
353927
Bacteroidota
TTC
Glu
>WENV170028639
CDYF01009639
185921
Bacteroidota
GTC
Asp
>WENV170029213
CDYF01035134
23696
Bacteroidota
GCT
Ser
>WENV170028953
CDYF01024610
23696
Bacteroidota
GCT
Ser
>WENV170028860
CDYF01020356
414426
Bacteroidota
CTG
Gln
>WENV170028582
CDYF01005877
414426
Bacteroidota
CTG
Gln
>WENV170029254
CDYF01036582
56823
Bacteroidota
TGA
Ser
>WENV170029253
CDYF01036582
56823
Bacteroidota
TGA
Ser
>WENV170029138
CDYF01032403
56823
Bacteroidota
TGA
Ser
>WENV170029076
CDYF01030061
56823
Bacteroidota
TGA
Ser
>WENV170029052
CDYF01028948
56823
Bacteroidota
TGA
Ser
>WENV170029274
CDYF01037214
55270
Bacteroidota
TGA
Ser
>WENV170028600
CDYF01007239
16224
Bacteroidota
GGA
Ser
>WENV170028795
CDYF01016852
16220
Bacteroidota
GGA
Ser
>WENV170029193
CDYF01034759
338125
Bacteroidota
CCT
Arg
>WENV170029073
CDYF01030040
338125
Bacteroidota
CCT
Arg
>WENV170028487
CDYF01001691
338125
Bacteroidota
CCT
Arg
>WENV170028750
CDYF01014705
235129
Bacteroidota
GCC
Gly
>WENV170028634
CDYF01009357
235129
Bacteroidota
GCC
Gly
>WENV170028632
CDYF01009357
235129
Bacteroidota
GCC
Gly
>WENV170028579
CDYF01005807
235129
Bacteroidota
GCC
Gly
>WENV170029252
CDYF01036529
235129
Bacteroidota
GCC
Gly
>WENV170029098
CDYF01030627
235129
Bacteroidota
GCC
Gly
>WENV170029096
CDYF01030627
235129
Bacteroidota
GCC
Gly
>WENV170029094
CDYF01030627
235129
Bacteroidota
GCC
Gly
>WENV170028940
CDYF01024201
235129
Bacteroidota
GCC
Gly
>WENV170028752
CDYF01014705
235129
Bacteroidota
GCC
Gly
>WENV170029256
CDYF01036763
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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