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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170135056
CENU01170594
95975
Gammaproteobacteria
GAG
Leu
>WENV170133535
CENU01031537
243823
Gammaproteobacteria
GCC
Gly
>WENV170135255
CENU01190144
236480
Gammaproteobacteria
GTG
His
>WENV170134098
CENU01077945
281920
Gammaproteobacteria
CCA
Trp
>WENV170133457
CENU01027854
244202
Gammaproteobacteria
TTT
Lys
>WENV170134478
CENU01111167
290337
Gammaproteobacteria
TAC
Val
>WENV170133707
CENU01045095
241476
Gammaproteobacteria
TTT
Lys
>WENV170134993
CENU01164598
144816
Gammaproteobacteria
TGG
Pro
>WENV170135616
CENU01244494
171935
Gammaproteobacteria
ACG
Arg
>WENV170133363
CENU01021078
147647
Gammaproteobacteria
CAT
Met
>WENV170134476
CENU01110969
237709
Gammaproteobacteria
GTG
His
>WENV170133860
CENU01058788
240642
Gammaproteobacteria
GTT
Asn
>WENV170135792
CENU01343145
149036
Gammaproteobacteria
CCA
Trp
>WENV170133993
CENU01069076
24366
Gammaproteobacteria
GGA
Ser
>WENV170134549
CENU01118327
245602
Gammaproteobacteria
TTT
Lys
>WENV170135359
CENU01198422
69672
Gammaproteobacteria
TAA
Leu
>WENV170135277
CENU01192162
270709
Gammaproteobacteria
GTG
His
>WENV170134535
CENU01117609
237221
Gammaproteobacteria
GGC
Ala
>WENV170135231
CENU01188137
412799
Gammaproteobacteria
GCA
Cys
>WENV170136064
CENU01415092
52727
Gammaproteobacteria
GGA
Ser
>WENV170133475
CENU01028804
202944
Gammaproteobacteria
TGG
Pro
>WENV170133093
CENU01004913
202944
Gammaproteobacteria
TGG
Pro
>WENV170135550
CENU01204967
199268
Gammaproteobacteria
ACG
Arg
>WENV170134856
CENU01150225
199268
Gammaproteobacteria
ACG
Arg
>WENV170134201
CENU01086661
252289
Gammaproteobacteria
TTT
Lys
>WENV170133930
CENU01062766
23644
Gammaproteobacteria
GGA
Ser
>WENV170134371
CENU01099855
147057
Gammaproteobacteria
GAC
Val
>WENV170134695
CENU01133366
294663
Gammaproteobacteria
TTC
Glu
>WENV170133508
CENU01030184
294663
Gammaproteobacteria
TTC
Glu
>WENV170134275
CENU01092745
147055
Gammaproteobacteria
TGG
Pro
>WENV170135224
CENU01187825
165387
Gammaproteobacteria
CCT
Arg
>WENV170134276
CENU01092745
147056
Gammaproteobacteria
TCT
Arg
>WENV170133921
CENU01062113
145713
Gammaproteobacteria
CAT
Met
>WENV170133194
CENU01011484
145713
Gammaproteobacteria
CAT
Met
>WENV170135566
CENU01208250
250885
Gammaproteobacteria
TGC
Ala
>WENV170133955
CENU01065259
195303
Gammaproteobacteria
GAT
Ile
>WENV170134323
CENU01095767
128930
Gammaproteobacteria
GTC
Asp
>WENV170134318
CENU01095538
243485
Gammaproteobacteria
TGT
Thr
>WENV170135027
CENU01167237
237421
Gammaproteobacteria
TGT
Thr
>WENV170134188
CENU01085616
237421
Gammaproteobacteria
TGT
Thr
>WENV170134537
CENU01117609
237713
Gammaproteobacteria
TAC
Val
>WENV170133446
CENU01026813
411735
Gammaproteobacteria
GCA
Cys
>WENV170134675
CENU01131818
16460
Gammaproteobacteria
TGA
Ser
>WENV170134699
CENU01133763
147049
Gammaproteobacteria
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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