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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170298336
CESF01094467
166668
Bacteroidota
CAT
Met
>WENV170298270
CESF01081891
165001
Bacteroidota
GTT
Asn
>WENV170298557
CESF01136991
416430
Bacteroidota
GCA
Cys
>WENV170298122
CESF01050778
126691
Bacteroidota
TGG
Pro
>WENV170298617
CESF01139139
126691
Bacteroidota
TGG
Pro
>WENV170298909
CESF01312510
235817
Bacteroidota
GAA
Phe
>WENV170298064
CESF01042618
81018
Bacteroidota
GTA
Tyr
>WENV170297974
CESF01030098
100198
Bacteroidota
TAG
Leu
>WENV170298758
CESF01250007
241347
Bacteroidota
TTG
Gln
>WENV170298594
CESF01138828
96678
Bacteroidota
TAG
Leu
>WENV170298031
CESF01038240
338568
Bacteroidota
TTC
Glu
>WENV170298311
CESF01088196
96418
Bacteroidota
GTA
Tyr
>WENV170298392
CESF01109218
151930
Bacteroidota
CAT
Met
>WENV170297986
CESF01031567
60695
Bacteroidota
GCT
Ser
>WENV170298602
CESF01138973
127414
Bacteroidota
TGG
Pro
>WENV170298272
CESF01082675
127414
Bacteroidota
TGG
Pro
>WENV170298516
CESF01132501
44938
Bacteroidota
TGA
Ser
>WENV170297799
CESF01007175
17987
Bacteroidota
GGA
Ser
>WENV170298360
CESF01101596
96177
Bacteroidota
CAA
Leu
>WENV170298148
CESF01054890
259147
Bacteroidota
TTT
Lys
>WENV170298549
CESF01136296
235802
Bacteroidota
CAT
Met
>WENV170297941
CESF01025324
235802
Bacteroidota
CAT
Met
>WENV170298592
CESF01138819
161966
Bacteroidota
CAT
Met
>WENV170297905
CESF01021749
47173
Bacteroidota
TGA
Ser
>WENV170298398
CESF01109732
150454
Bacteroidota
TGT
Thr
>WENV170298203
CESF01067213
246641
Bacteroidota
GAA
Phe
>WENV170298075
CESF01044329
246641
Bacteroidota
GAA
Phe
>WENV170297770
CESF01003472
127137
Bacteroidota
TAC
Val
>WENV170298455
CESF01121124
165044
Bacteroidota
GTG
His
>WENV170298342
CESF01095460
238609
Bacteroidota
TTT
Lys
>WENV170298478
CESF01125266
145555
Bacteroidota
GTC
Asp
>WENV170298651
CESF01161513
341465
Bacteroidota
TTC
Glu
>WENV170298057
CESF01041651
240901
Bacteroidota
TTT
Lys
>WENV170297977
CESF01030800
240901
Bacteroidota
TTT
Lys
>WENV170297800
CESF01007642
240901
Bacteroidota
TTT
Lys
>WENV170298140
CESF01053946
145409
Bacteroidota
GTG
His
>WENV170298862
CESF01306857
48382
Bacteroidota
TGA
Ser
>WENV170298280
CESF01083472
48382
Bacteroidota
TGA
Ser
>WENV170297973
CESF01030098
145405
Bacteroidota
GTC
Asp
>WENV170297903
CESF01021618
240620
Bacteroidota
GCC
Gly
>WENV170298393
CESF01109321
127216
Bacteroidota
GGG
Pro
>WENV170297862
CESF01015899
127216
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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