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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
66 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170298138
CESF01053910
277731
Bacteroidota
>WENV170298362
CESF01101637
117444
Bacteroidota
GTA
Tyr
>WENV170298552
CESF01136403
292540
Bacteroidota
TCC
Gly
>WENV170297837
CESF01013150
132066
Bacteroidota
CAA
Leu
>WENV170298540
CESF01135638
165596
Bacteroidota
GGC
Ala
>WENV170298392
CESF01109218
175346
Bacteroidota
>WENV170298311
CESF01088196
106764
Bacteroidota
GTA
Tyr
>WENV170297939
CESF01025324
369213
Bacteroidota
GCC
Gly
>WENV170298794
CESF01274956
162224
Bacteroidota
GGG
Pro
>WENV170298100
CESF01048518
184180
Bacteroidota
GTC
Asp
>WENV170297941
CESF01025324
314601
Bacteroidota
>WENV170298549
CESF01136296
314601
Bacteroidota
>WENV170297839
CESF01013150
161999
Bacteroidota
TCG
Arg
>WENV170297977
CESF01030800
266737
Bacteroidota
TTT
Lys
>WENV170298342
CESF01095460
258742
Bacteroidota
TTT
Lys
>WENV170297809
CESF01009005
116954
Bacteroidota
TAG
Leu
>WENV170297961
CESF01028663
219128
Bacteroidota
GTT
Asn
>WENV170298393
CESF01109321
139133
Bacteroidota
GGG
Pro
>WENV170298259
CESF01080239
211884
Bacteroidota
TGC
Ala
>WENV170298064
CESF01042618
101963
Bacteroidota
GTA
Tyr
>WENV170298280
CESF01083472
57357
Bacteroidota
TGA
Ser
>WENV170298516
CESF01132501
57357
Bacteroidota
TGA
Ser
>WENV170297864
CESF01016180
160349
Bacteroidota
GTG
His
>WENV170298563
CESF01137896
160349
Bacteroidota
GTG
His
>WENV170297940
CESF01025324
71385
Bacteroidota
TAA
Leu
>WENV170298255
CESF01078026
311209
Bacteroidota
TTG
Gln
>WENV170298622
CESF01139259
456030
Bacteroidota
CCA
Trp
>WENV170298883
CESF01311128
50342
Bacteroidota
TGA
Ser
>WENV170297991
CESF01031750
178406
Bacteroidota
CAT
Met
>WENV170298599
CESF01138926
170035
Bacteroidota
GTT
Asn
>WENV170298221
CESF01071498
229004
Bacteroidota
GGC
Ala
>WENV170298307
CESF01087896
229004
Bacteroidota
GGC
Ala
>WENV170298122
CESF01050778
153255
Bacteroidota
TGG
Pro
>WENV170298617
CESF01139139
153255
Bacteroidota
TGG
Pro
>WENV170298077
CESF01044805
263627
Bacteroidota
TTG
Gln
>WENV170298031
CESF01038240
370675
Bacteroidota
TTC
Glu
>WENV170298148
CESF01054890
257687
Bacteroidota
TTT
Lys
>WENV170297990
CESF01031677
119207
Bacteroidota
TAG
Leu
>WENV170298272
CESF01082675
144149
Bacteroidota
TGG
Pro
>WENV170298602
CESF01138973
144149
Bacteroidota
TGG
Pro
>WENV170298075
CESF01044329
321470
Bacteroidota
GAA
Phe
>WENV170298203
CESF01067213
321470
Bacteroidota
GAA
Phe
>WENV170298271
CESF01082192
369214
Bacteroidota
GGT
Thr
>WENV170298557
CESF01136991
454104
Bacteroidota
GCA
Cys
>WENV170298336
CESF01094467
161476
Bacteroidota
>WENV170298561
CESF01137807
105182
Bacteroidota
CAA
Leu
>WENV170298909
CESF01312510
328225
Bacteroidota
GAA
Phe
>WENV170297799
CESF01007175
24600
Bacteroidota
GGA
Ser
>WENV170297770
CESF01003472
140541
Bacteroidota
TAC
Val
>WENV170298651
CESF01161513
410435
Bacteroidota
TTC
Glu
>WENV170298398
CESF01109732
232558
Bacteroidota
TGT
Thr
>WENV170298140
CESF01053946
169641
Bacteroidota
GTG
His
>WENV170298285
CESF01083941
310118
Bacteroidota
CCA
Trp
>WENV170298298
CESF01086703
310118
Bacteroidota
CCA
Trp
>WENV170298341
CESF01095401
310118
Bacteroidota
CCA
Trp
>WENV170298445
CESF01119467
310118
Bacteroidota
CCA
Trp
>WENV170298471
CESF01123804
310118
Bacteroidota
CCA
Trp
>WENV170298550
CESF01136334
310118
Bacteroidota
CCA
Trp
>WENV170297974
CESF01030098
114734
Bacteroidota
TAG
Leu
>WENV170298360
CESF01101596
107776
Bacteroidota
CAA
Leu
>WENV170298802
CESF01281146
111503
Bacteroidota
CAA
Leu
>WENV170298761
CESF01253641
161055
Bacteroidota
TCT
Arg
>WENV170298037
CESF01038660
179763
Bacteroidota
GTG
His
>WENV170298127
CESF01051721
390361
Bacteroidota
CCT
Arg
>WENV170297905
CESF01021749
60145
Bacteroidota
TGA
Ser
>WENV170298626
CESF01139274
172819
Bacteroidota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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