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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170372624
CETS01116770
365250
Alphaproteobacteria
GCC
Gly
>WENV170371904
CETS01048880
237493
Alphaproteobacteria
CCA
Trp
>WENV170372414
CETS01093356
237493
Alphaproteobacteria
CCA
Trp
>WENV170372703
CETS01125927
237493
Alphaproteobacteria
CCA
Trp
>WENV170371419
CETS01010576
268154
Alphaproteobacteria
TGT
Thr
>WENV170372257
CETS01077704
268154
Alphaproteobacteria
TGT
Thr
>WENV170371852
CETS01044891
237800
Alphaproteobacteria
>WENV170373324
CETS01250684
412917
Alphaproteobacteria
TCC
Gly
>WENV170373249
CETS01224629
237489
Alphaproteobacteria
CAT
Met
>WENV170371831
CETS01042931
10665
Alphaproteobacteria
GCT
Ser
>WENV170372092
CETS01063561
113700
Alphaproteobacteria
>WENV170372950
CETS01149860
144964
Alphaproteobacteria
TGG
Pro
>WENV170371879
CETS01046868
159305
Alphaproteobacteria
GTC
Asp
>WENV170372390
CETS01091136
421153
Alphaproteobacteria
>WENV170371508
CETS01016344
421153
Alphaproteobacteria
>WENV170372287
CETS01080044
147577
Alphaproteobacteria
CCG
Arg
>WENV170371721
CETS01033191
199865
Alphaproteobacteria
CAT
Met
>WENV170371964
CETS01052999
95928
Alphaproteobacteria
TAG
Leu
>WENV170371744
CETS01035242
95928
Alphaproteobacteria
TAG
Leu
>WENV170371615
CETS01024772
31506
Alphaproteobacteria
TGA
Ser
>WENV170371706
CETS01032127
162801
Alphaproteobacteria
GTG
His
>WENV170372065
CETS01061727
200119
Alphaproteobacteria
CAT
Met
>WENV170373102
CETS01161582
182651
Alphaproteobacteria
GTC
Asp
>WENV170372519
CETS01105230
74116
Alphaproteobacteria
CAG
Leu
>WENV170372259
CETS01078303
74116
Alphaproteobacteria
CAG
Leu
>WENV170372593
CETS01113807
235496
Alphaproteobacteria
TAC
Val
>WENV170371950
CETS01051878
193197
Alphaproteobacteria
ACG
Arg
>WENV170372358
CETS01088287
294226
Alphaproteobacteria
>WENV170372110
CETS01065627
148158
Alphaproteobacteria
ACG
Arg
>WENV170372915
CETS01147060
339725
Alphaproteobacteria
GAA
Phe
>WENV170372006
CETS01057310
339725
Alphaproteobacteria
GAA
Phe
>WENV170371302
CETS01001411
339725
Alphaproteobacteria
GAA
Phe
>WENV170372918
CETS01147481
258175
Alphaproteobacteria
CGC
Ala
>WENV170372634
CETS01117720
258175
Alphaproteobacteria
CGC
Ala
>WENV170372143
CETS01068008
258175
Alphaproteobacteria
CGC
Ala
>WENV170371534
CETS01018238
258175
Alphaproteobacteria
CGC
Ala
>WENV170372069
CETS01062253
167926
Alphaproteobacteria
CAT
Met
>WENV170371934
CETS01051058
161002
Alphaproteobacteria
GTG
His
>WENV170373004
CETS01156523
364533
Alphaproteobacteria
GCC
Gly
>WENV170372051
CETS01060518
130084
Alphaproteobacteria
GGG
Pro
>WENV170372691
CETS01124120
339305
Alphaproteobacteria
GGT
Thr
>WENV170372863
CETS01141777
152510
Alphaproteobacteria
GGG
Pro
>WENV170371836
CETS01043574
412281
Alphaproteobacteria
CTG
Gln
>WENV170371640
CETS01027162
412281
Alphaproteobacteria
CTG
Gln
>WENV170372607
CETS01114826
369678
Alphaproteobacteria
GGT
Thr
>WENV170372315
CETS01083250
369678
Alphaproteobacteria
GGT
Thr
>WENV170372805
CETS01135897
150194
Alphaproteobacteria
TCT
Arg
>WENV170371707
CETS01032147
412424
Alphaproteobacteria
TCC
Gly
>WENV170372744
CETS01130204
296307
Alphaproteobacteria
CCA
Trp
>WENV170373404
CETS01275895
268598
Alphaproteobacteria
GAA
Phe
>WENV170372610
CETS01115107
377327
Alphaproteobacteria
GCC
Gly
>WENV170371422
CETS01010590
377327
Alphaproteobacteria
GCC
Gly
>WENV170371363
CETS01005938
342846
Alphaproteobacteria
GAC
Val
>WENV170372062
CETS01061392
10904
Alphaproteobacteria
GCT
Ser
>WENV170372286
CETS01080010
191695
Alphaproteobacteria
CCT
Arg
>WENV170372237
CETS01074971
191695
Alphaproteobacteria
CCT
Arg
>WENV170371729
CETS01033866
96061
Alphaproteobacteria
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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