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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170551971
CXWJ01032981
38355
Actinomycetota
GAG
Leu
>WENV170551885
CXWJ01027911
295152
Actinomycetota
GTT
Asn
>WENV170552123
CXWJ01040323
238626
Actinomycetota
CGC
Ala
>WENV170551910
CXWJ01029334
105043
Actinomycetota
TAG
Leu
>WENV170551584
CXWJ01013653
390230
Actinomycetota
CCG
Arg
>WENV170552342
CXWJ01057058
37198
Actinomycetota
GAG
Leu
>WENV170552130
CXWJ01040966
338762
Actinomycetota
CTG
Gln
>WENV170552047
CXWJ01035993
45926
Actinomycetota
TGA
Ser
>WENV170552260
CXWJ01050781
50060
Actinomycetota
CGA
Ser
>WENV170551714
CXWJ01018886
158275
Actinomycetota
GTC
Asp
>WENV170552023
CXWJ01035107
174437
Actinomycetota
CAC
Val
>WENV170551237
CXWJ01001851
162442
Actinomycetota
GAT
Ile
>WENV170552357
CXWJ01058123
148837
Actinomycetota
CAT
Met
>WENV170552410
CXWJ01063432
37306
Actinomycetota
GAG
Leu
>WENV170551548
CXWJ01011934
46424
Actinomycetota
GGA
Ser
>WENV170551842
CXWJ01025331
266835
Actinomycetota
TGC
Ala
>WENV170552323
CXWJ01055503
16376
Actinomycetota
CGA
Ser
>WENV170552006
CXWJ01033943
16376
Actinomycetota
CGA
Ser
>WENV170552059
CXWJ01036468
270259
Actinomycetota
TTC
Glu
>WENV170552378
CXWJ01059549
236214
Actinomycetota
CCA
Trp
>WENV170552022
CXWJ01035030
283707
Actinomycetota
CTT
Lys
>WENV170551821
CXWJ01024449
310739
Actinomycetota
TTT
Lys
>WENV170551804
CXWJ01023825
11546
Actinomycetota
GCT
Ser
>WENV170551959
CXWJ01032517
290641
Actinomycetota
GGT
Thr
>WENV170552303
CXWJ01053875
173207
Actinomycetota
TTT
Lys
>WENV170552341
CXWJ01056975
122002
Actinomycetota
TTG
Gln
>WENV170552211
CXWJ01046732
122002
Actinomycetota
TTG
Gln
>WENV170552181
CXWJ01043350
122002
Actinomycetota
TTG
Gln
>WENV170552014
CXWJ01034335
245899
Actinomycetota
ACG
Arg
>WENV170552420
CXWJ01065686
301500
Actinomycetota
CCC
Gly
>WENV170552417
CXWJ01064781
301500
Actinomycetota
CCC
Gly
>WENV170552150
CXWJ01041617
301500
Actinomycetota
CCC
Gly
>WENV170552294
CXWJ01053591
254531
Actinomycetota
>WENV170552304
CXWJ01053961
269372
Actinomycetota
CCA
Trp
>WENV170552258
CXWJ01050601
401680
Actinomycetota
CTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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