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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180004344
FLRS01000274
412480
Bacteroidota
>WENV180004394
FLRS01001323
412480
Bacteroidota
>WENV180004576
FLRS01027616
412480
Bacteroidota
>WENV180004660
FLRS01068683
339412
Bacteroidota
GGT
Thr
>WENV180004439
FLRS01004009
148097
Bacteroidota
TGG
Pro
>WENV180004539
FLRS01019855
148097
Bacteroidota
TGG
Pro
>WENV180004619
FLRS01045373
237796
Bacteroidota
CGT
Thr
>WENV180004333
FLRS01000049
340120
Bacteroidota
CCT
Arg
>WENV180004479
FLRS01009028
340120
Bacteroidota
CCT
Arg
>WENV180004770
FLRS01154248
340120
Bacteroidota
CCT
Arg
>WENV180004486
FLRS01009968
413663
Bacteroidota
CTG
Gln
>WENV180004506
FLRS01013792
413663
Bacteroidota
CTG
Gln
>WENV180004800
FLRS01172968
413663
Bacteroidota
CTG
Gln
>WENV180004683
FLRS01086357
237797
Bacteroidota
CCA
Trp
>WENV180004605
FLRS01040388
237797
Bacteroidota
CCA
Trp
>WENV180004581
FLRS01029370
237797
Bacteroidota
CCA
Trp
>WENV180004578
FLRS01028940
148096
Bacteroidota
GTG
His
>WENV180004366
FLRS01000741
148096
Bacteroidota
GTG
His
>WENV180004752
FLRS01139220
144695
Bacteroidota
CAT
Met
>WENV180004740
FLRS01125072
144695
Bacteroidota
CAT
Met
>WENV180004427
FLRS01003330
238811
Bacteroidota
CAT
Met
>WENV180004389
FLRS01001216
238811
Bacteroidota
CAT
Met
>WENV180004628
FLRS01048956
412479
Bacteroidota
TTG
Gln
>WENV180004358
FLRS01000436
412479
Bacteroidota
TTG
Gln
>WENV180004776
FLRS01157507
155123
Bacteroidota
GTT
Asn
>WENV180004775
FLRS01157105
155123
Bacteroidota
GTT
Asn
>WENV180004696
FLRS01092400
155123
Bacteroidota
GTT
Asn
>WENV180004594
FLRS01032160
155123
Bacteroidota
GTT
Asn
>WENV180004582
FLRS01029845
155123
Bacteroidota
GTT
Asn
>WENV180004481
FLRS01009174
155123
Bacteroidota
GTT
Asn
>WENV180004470
FLRS01007489
155123
Bacteroidota
GTT
Asn
>WENV180004632
FLRS01050979
238810
Bacteroidota
CGG
Pro
>WENV180004375
FLRS01000935
238810
Bacteroidota
CGG
Pro
>WENV180004788
FLRS01167787
238810
Bacteroidota
CGG
Pro
>WENV180004711
FLRS01102183
127253
Bacteroidota
GGG
Pro
>WENV180004638
FLRS01054023
127253
Bacteroidota
GGG
Pro
>WENV180004411
FLRS01001986
127253
Bacteroidota
GGG
Pro
>WENV180004335
FLRS01000072
127253
Bacteroidota
GGG
Pro
>WENV180004606
FLRS01040727
46489
Bacteroidota
TGA
Ser
>WENV180004797
FLRS01172116
37076
Bacteroidota
TAA
Leu
>WENV180004784
FLRS01166304
37076
Bacteroidota
TAA
Leu
>WENV180004610
FLRS01041337
37076
Bacteroidota
TAA
Leu
>WENV180004604
FLRS01038752
339634
Bacteroidota
CCT
Arg
>WENV180004500
FLRS01012708
96147
Bacteroidota
TAG
Leu
>WENV180004332
FLRS01000024
344769
Bacteroidota
CTC
Glu
>WENV180004331
FLRS01000024
344769
Bacteroidota
CTC
Glu
>WENV180004699
FLRS01094734
339996
Bacteroidota
TTC
Glu
>WENV180004442
FLRS01004394
147148
Bacteroidota
CAT
Met
>WENV180004737
FLRS01120823
419272
Bacteroidota
CTG
Gln
>WENV180004639
FLRS01054210
419272
Bacteroidota
CTG
Gln
>WENV180004527
FLRS01017388
419272
Bacteroidota
CTG
Gln
>WENV180004372
FLRS01000891
172372
Bacteroidota
TGC
Ala
>WENV180004799
FLRS01172510
95986
Bacteroidota
GTA
Tyr
>WENV180004760
FLRS01144953
95986
Bacteroidota
GTA
Tyr
>WENV180004465
FLRS01007060
95986
Bacteroidota
GTA
Tyr
>WENV180004448
FLRS01005119
95986
Bacteroidota
GTA
Tyr
>WENV180004343
FLRS01000274
95986
Bacteroidota
GTA
Tyr
>WENV180004603
FLRS01038079
16494
Bacteroidota
GGA
Ser
>WENV180004334
FLRS01000066
16494
Bacteroidota
GGA
Ser
>WENV180004600
FLRS01036917
132360
Bacteroidota
GGG
Pro
>WENV180004337
FLRS01000162
146762
Bacteroidota
TGG
Pro
>WENV180004549
FLRS01021994
146764
Bacteroidota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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