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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180005218
FLRW01000768
141635
Bacteroidota
TAC
Val
>WENV180005574
FLRW01107835
339412
Bacteroidota
GGT
Thr
>WENV180005472
FLRW01054053
148097
Bacteroidota
TGG
Pro
>WENV180005474
FLRW01054053
97336
Bacteroidota
CAG
Leu
>WENV180005502
FLRW01075000
340120
Bacteroidota
CCT
Arg
>WENV180005423
FLRW01026705
413663
Bacteroidota
CTG
Gln
>WENV180005535
FLRW01086281
413663
Bacteroidota
CTG
Gln
>WENV180005668
FLRW01212791
237797
Bacteroidota
CCA
Trp
>WENV180005501
FLRW01073891
237797
Bacteroidota
CCA
Trp
>WENV180005462
FLRW01047575
148096
Bacteroidota
GTG
His
>WENV180005633
FLRW01160845
413952
Bacteroidota
>WENV180005587
FLRW01115634
238811
Bacteroidota
CAT
Met
>WENV180005734
FLRW01286151
412479
Bacteroidota
TTG
Gln
>WENV180005650
FLRW01198358
412439
Bacteroidota
CCA
Trp
>WENV180005215
FLRW01000669
37076
Bacteroidota
TAA
Leu
>WENV180005463
FLRW01047798
339634
Bacteroidota
CCT
Arg
>WENV180005635
FLRW01164972
414526
Bacteroidota
GCA
Cys
>WENV180005534
FLRW01084960
414526
Bacteroidota
GCA
Cys
>WENV180005415
FLRW01023127
136207
Bacteroidota
TAC
Val
>WENV180005438
FLRW01035132
81773
Bacteroidota
CAG
Leu
>WENV180005735
FLRW01290295
147148
Bacteroidota
CAT
Met
>WENV180005583
FLRW01114026
144639
Bacteroidota
GGC
Ala
>WENV180005554
FLRW01093604
144639
Bacteroidota
GGC
Ala
>WENV180005461
FLRW01047461
144639
Bacteroidota
GGC
Ala
>WENV180005557
FLRW01096647
240012
Bacteroidota
CCC
Gly
>WENV180005693
FLRW01236803
369111
Bacteroidota
TTC
Glu
>WENV180005585
FLRW01114692
127951
Bacteroidota
TAC
Val
>WENV180005584
FLRW01114692
127951
Bacteroidota
TAC
Val
>WENV180005573
FLRW01107835
95986
Bacteroidota
GTA
Tyr
>WENV180005425
FLRW01027639
95986
Bacteroidota
GTA
Tyr
>WENV180005219
FLRW01000768
95986
Bacteroidota
GTA
Tyr
>WENV180005727
FLRW01275406
59413
Bacteroidota
GCT
Ser
>WENV180005445
FLRW01038786
59498
Bacteroidota
GAG
Leu
>WENV180005701
FLRW01242992
302002
Bacteroidota
CGT
Thr
>WENV180005491
FLRW01066464
235129
Bacteroidota
GCC
Gly
>WENV180005210
FLRW01000508
235129
Bacteroidota
GCC
Gly
>WENV180005211
FLRW01000550
313363
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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