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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180005393
FLRW01017892
161400
Bacteroidota
>WENV180005735
FLRW01290295
159594
Bacteroidota
CAT
Met
>WENV180005534
FLRW01084960
452016
Bacteroidota
GCA
Cys
>WENV180005635
FLRW01164972
452016
Bacteroidota
GCA
Cys
>WENV180005385
FLRW01014674
453595
Bacteroidota
CTG
Gln
>WENV180005502
FLRW01075000
376547
Bacteroidota
CCT
Arg
>WENV180005550
FLRW01093487
469075
Bacteroidota
>WENV180005478
FLRW01055847
277633
Bacteroidota
CTT
Lys
>WENV180005438
FLRW01035132
88755
Bacteroidota
CAG
Leu
>WENV180005701
FLRW01242992
325097
Bacteroidota
CGT
Thr
>WENV180005587
FLRW01115634
258398
Bacteroidota
>WENV180005472
FLRW01054053
170116
Bacteroidota
TGG
Pro
>WENV180005610
FLRW01135505
472284
Bacteroidota
TTG
Gln
>WENV180005539
FLRW01088404
116055
Bacteroidota
CAA
Leu
>WENV180005584
FLRW01114692
138941
Bacteroidota
TAC
Val
>WENV180005585
FLRW01114692
138941
Bacteroidota
TAC
Val
>WENV180005727
FLRW01275406
65144
Bacteroidota
GCT
Ser
>WENV180005734
FLRW01286151
448321
Bacteroidota
TTG
Gln
>WENV180005462
FLRW01047575
183527
Bacteroidota
GTG
His
>WENV180005219
FLRW01000768
105253
Bacteroidota
GTA
Tyr
>WENV180005425
FLRW01027639
105253
Bacteroidota
GTA
Tyr
>WENV180005573
FLRW01107835
105253
Bacteroidota
GTA
Tyr
>WENV180005463
FLRW01047798
369590
Bacteroidota
CCT
Arg
>WENV180005650
FLRW01198358
451301
Bacteroidota
CCA
Trp
>WENV180005215
FLRW01000669
41238
Bacteroidota
TAA
Leu
>WENV180005501
FLRW01073891
294312
Bacteroidota
CCA
Trp
>WENV180005668
FLRW01212791
294312
Bacteroidota
CCA
Trp
>WENV180005574
FLRW01107835
369492
Bacteroidota
GGT
Thr
>WENV180005752
FLRW01314321
310118
Bacteroidota
CCA
Trp
>WENV180005633
FLRW01160845
453372
Bacteroidota
CTG
Gln
>WENV180005474
FLRW01054053
105933
Bacteroidota
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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