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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
75 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180010128
FLSC01322149
89754
Bacillota
GTA
Tyr
>WENV180009787
FLSC01085366
324257
Bacillota
CCA
Trp
>WENV180009977
FLSC01208851
324257
Bacillota
CCA
Trp
>WENV180009339
FLSC01001361
160420
Bacillota
CAT
Met
>WENV180009802
FLSC01092171
160420
Bacillota
CAT
Met
>WENV180009866
FLSC01132630
160420
Bacillota
CAT
Met
>WENV180010096
FLSC01299040
160420
Bacillota
CAT
Met
>WENV180010163
FLSC01360649
160420
Bacillota
CAT
Met
>WENV180010188
FLSC01384000
370121
Bacillota
>WENV180010213
FLSC01415050
370121
Bacillota
>WENV180009311
FLSC01000720
18453
Bacillota
GGA
Ser
>WENV180009326
FLSC01001091
18453
Bacillota
GGA
Ser
>WENV180009348
FLSC01001649
18453
Bacillota
GGA
Ser
>WENV180009901
FLSC01149301
172755
Bacillota
>WENV180009898
FLSC01149301
8452
Bacillota
GCT
Ser
>WENV180009747
FLSC01068334
65657
Bacillota
CAA
Leu
>WENV180010095
FLSC01299040
259279
Bacillota
GGT
Thr
>WENV180010041
FLSC01247531
258854
Bacillota
TGC
Ala
>WENV180009480
FLSC01005019
160630
Bacillota
CCT
Arg
>WENV180009580
FLSC01016996
160630
Bacillota
CCT
Arg
>WENV180010070
FLSC01273160
160630
Bacillota
CCT
Arg
>WENV180009521
FLSC01008849
274235
Bacillota
TAC
Val
>WENV180009931
FLSC01177020
163160
Bacillota
GGG
Pro
>WENV180010172
FLSC01367926
370120
Bacillota
CCG
Arg
>WENV180010271
FLSC01447587
370120
Bacillota
CCG
Arg
>WENV180010187
FLSC01383465
266302
Bacillota
GTC
Asp
>WENV180009308
FLSC01000715
18454
Bacillota
GCT
Ser
>WENV180009766
FLSC01077114
18454
Bacillota
GCT
Ser
>WENV180009967
FLSC01201198
18454
Bacillota
GCT
Ser
>WENV180009925
FLSC01171484
209073
Bacillota
TCT
Arg
>WENV180010126
FLSC01319784
209073
Bacillota
TCT
Arg
>WENV180009980
FLSC01209170
262083
Bacillota
CCA
Trp
>WENV180010110
FLSC01307366
269979
Bacillota
TAC
Val
>WENV180010261
FLSC01445857
314373
Bacillota
TAC
Val
>WENV180009319
FLSC01000869
41296
Bacillota
TAA
Leu
>WENV180009860
FLSC01129501
466245
Bacillota
GCA
Cys
>WENV180010262
FLSC01445857
320507
Bacillota
TGT
Thr
>WENV180009543
FLSC01010803
160422
Bacillota
TCT
Arg
>WENV180009594
FLSC01021454
160422
Bacillota
TCT
Arg
>WENV180009714
FLSC01056273
160422
Bacillota
TCT
Arg
>WENV180009776
FLSC01079924
170692
Bacillota
CAT
Met
>WENV180010265
FLSC01445857
371923
Bacillota
>WENV180010015
FLSC01226853
124699
Bacillota
CAA
Leu
>WENV180010314
FLSC01474906
124699
Bacillota
CAA
Leu
>WENV180009900
FLSC01149301
171593
Bacillota
TGG
Pro
>WENV180009325
FLSC01001090
449433
Bacillota
CCC
Gly
>WENV180009964
FLSC01200201
371879
Bacillota
TTG
Gln
>WENV180010363
FLSC01482845
259274
Bacillota
GAA
Phe
>WENV180009349
FLSC01001663
1288
Bacillota
>WENV180009324
FLSC01001024
280177
Bacillota
CTT
Lys
>WENV180009981
FLSC01209170
163166
Bacillota
ACG
Arg
>WENV180009774
FLSC01079638
380507
Bacillota
CCT
Arg
>WENV180009583
FLSC01017831
41496
Bacillota
CGA
Ser
>WENV180010366
FLSC01482845
41754
Bacillota
TAA
Leu
>WENV180009784
FLSC01083622
105465
Bacillota
TAG
Leu
>WENV180009849
FLSC01124850
105465
Bacillota
TAG
Leu
>WENV180009363
FLSC01001941
259275
Bacillota
CTT
Lys
>WENV180009693
FLSC01048395
259275
Bacillota
CTT
Lys
>WENV180010266
FLSC01445857
65656
Bacillota
TAA
Leu
>WENV180010186
FLSC01383465
163269
Bacillota
>WENV180010149
FLSC01342761
377331
Bacillota
GCC
Gly
>WENV180009256
FLSC01000097
18455
Bacillota
CGA
Ser
>WENV180009273
FLSC01000342
18455
Bacillota
CGA
Ser
>WENV180009354
FLSC01001828
18455
Bacillota
CGA
Ser
>WENV180009694
FLSC01049328
18455
Bacillota
CGA
Ser
>WENV180009856
FLSC01128125
18455
Bacillota
CGA
Ser
>WENV180009894
FLSC01148344
18455
Bacillota
CGA
Ser
>WENV180009988
FLSC01213697
18455
Bacillota
CGA
Ser
>WENV180009751
FLSC01070102
262075
Bacillota
GTT
Asn
>WENV180009630
FLSC01031303
88873
Bacillota
GAG
Leu
>WENV180009635
FLSC01032575
88873
Bacillota
GAG
Leu
>WENV180009872
FLSC01137247
88873
Bacillota
GAG
Leu
>WENV180010108
FLSC01307366
292274
Bacillota
TTT
Lys
>WENV180009825
FLSC01108962
163270
Bacillota
GTT
Asn
>WENV180010082
FLSC01284960
163270
Bacillota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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