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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
83 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180009369
FLSC01002021
243647
Bacillota
TTT
Lys
>WENV180010184
FLSC01383465
178679
Bacillota
CAT
Met
>WENV180009256
FLSC01000097
16842
Bacillota
CGA
Ser
>WENV180009273
FLSC01000342
16842
Bacillota
CGA
Ser
>WENV180009354
FLSC01001828
16842
Bacillota
CGA
Ser
>WENV180009694
FLSC01049328
16842
Bacillota
CGA
Ser
>WENV180009856
FLSC01128125
16842
Bacillota
CGA
Ser
>WENV180009894
FLSC01148344
16842
Bacillota
CGA
Ser
>WENV180009988
FLSC01213697
16842
Bacillota
CGA
Ser
>WENV180009579
FLSC01016862
305341
Bacillota
GTG
His
>WENV180009751
FLSC01070102
246392
Bacillota
GTT
Asn
>WENV180010191
FLSC01388268
155040
Bacillota
GAT
Ile
>WENV180009577
FLSC01016508
37549
Bacillota
TAA
Leu
>WENV180010265
FLSC01445857
389888
Bacillota
GCC
Gly
>WENV180010041
FLSC01247531
307003
Bacillota
TGC
Ala
>WENV180009324
FLSC01001024
243119
Bacillota
CTT
Lys
>WENV180009931
FLSC01177020
152047
Bacillota
GGG
Pro
>WENV180010263
FLSC01445857
308424
Bacillota
TTT
Lys
>WENV180010116
FLSC01311188
391536
Bacillota
TTC
Glu
>WENV180009896
FLSC01148729
391536
Bacillota
TTC
Glu
>WENV180009869
FLSC01134499
391536
Bacillota
TTC
Glu
>WENV180009651
FLSC01037365
391536
Bacillota
TTC
Glu
>WENV180010110
FLSC01307366
241761
Bacillota
TAC
Val
>WENV180009967
FLSC01201198
16834
Bacillota
GCT
Ser
>WENV180009766
FLSC01077114
16834
Bacillota
GCT
Ser
>WENV180009308
FLSC01000715
16834
Bacillota
GCT
Ser
>WENV180009868
FLSC01134499
243646
Bacillota
GTT
Asn
>WENV180009538
FLSC01010060
243646
Bacillota
GTT
Asn
>WENV180010314
FLSC01474906
114002
Bacillota
CAA
Leu
>WENV180010015
FLSC01226853
114002
Bacillota
CAA
Leu
>WENV180009964
FLSC01200201
342736
Bacillota
TTG
Gln
>WENV180010131
FLSC01323130
296878
Bacillota
GTT
Asn
>WENV180010267
FLSC01445857
162028
Bacillota
ACG
Arg
>WENV180010200
FLSC01398361
243612
Bacillota
TAC
Val
>WENV180010117
FLSC01311188
243612
Bacillota
TAC
Val
>WENV180009936
FLSC01181582
243612
Bacillota
TAC
Val
>WENV180009897
FLSC01148729
243612
Bacillota
TAC
Val
>WENV180009785
FLSC01083719
243612
Bacillota
TAC
Val
>WENV180009652
FLSC01037365
243612
Bacillota
TAC
Val
>WENV180009566
FLSC01015167
243612
Bacillota
TAC
Val
>WENV180009583
FLSC01017831
37551
Bacillota
CGA
Ser
>WENV180010183
FLSC01383126
147135
Bacillota
ACG
Arg
>WENV180009978
FLSC01208851
147135
Bacillota
ACG
Arg
>WENV180009655
FLSC01039883
147135
Bacillota
ACG
Arg
>WENV180009647
FLSC01036543
147135
Bacillota
ACG
Arg
>WENV180010213
FLSC01415050
342895
Bacillota
CAT
Met
>WENV180010188
FLSC01384000
342895
Bacillota
CAT
Met
>WENV180009735
FLSC01061872
342895
Bacillota
CAT
Met
>WENV180009636
FLSC01032661
342895
Bacillota
CAT
Met
>WENV180009389
FLSC01002505
342895
Bacillota
CAT
Met
>WENV180009900
FLSC01149301
154711
Bacillota
TGG
Pro
>WENV180010362
FLSC01482845
235197
Bacillota
GTC
Asp
>WENV180010019
FLSC01234270
235197
Bacillota
GTC
Asp
>WENV180009961
FLSC01199530
235197
Bacillota
GTC
Asp
>WENV180009929
FLSC01176835
235197
Bacillota
GTC
Asp
>WENV180010364
FLSC01482845
368876
Bacillota
GCC
Gly
>WENV180009938
FLSC01183471
368876
Bacillota
GCC
Gly
>WENV180009508
FLSC01007561
368876
Bacillota
GCC
Gly
>WENV180009981
FLSC01209170
152051
Bacillota
ACG
Arg
>WENV180010082
FLSC01284960
147183
Bacillota
GTT
Asn
>WENV180009825
FLSC01108962
147183
Bacillota
GTT
Asn
>WENV180009522
FLSC01008849
157838
Bacillota
GTC
Asp
>WENV180009917
FLSC01162838
243613
Bacillota
GTG
His
>WENV180009823
FLSC01107915
243613
Bacillota
GTG
His
>WENV180009367
FLSC01002021
243613
Bacillota
GTG
His
>WENV180010163
FLSC01360649
152491
Bacillota
CAT
Met
>WENV180010096
FLSC01299040
152491
Bacillota
CAT
Met
>WENV180009866
FLSC01132630
152491
Bacillota
CAT
Met
>WENV180009802
FLSC01092171
152491
Bacillota
CAT
Met
>WENV180009339
FLSC01001361
152491
Bacillota
CAT
Met
>WENV180010095
FLSC01299040
281472
Bacillota
GGT
Thr
>WENV180009714
FLSC01056273
178024
Bacillota
TCT
Arg
>WENV180009594
FLSC01021454
178024
Bacillota
TCT
Arg
>WENV180009543
FLSC01010803
178024
Bacillota
TCT
Arg
>WENV180009661
FLSC01041464
315448
Bacillota
GGT
Thr
>WENV180009550
FLSC01011799
413657
Bacillota
CCC
Gly
>WENV180010149
FLSC01342761
384950
Bacillota
GCC
Gly
>WENV180010109
FLSC01307366
393635
Bacillota
TTC
Glu
>WENV180010115
FLSC01311188
287034
Bacillota
GTT
Asn
>WENV180010323
FLSC01479732
413179
Bacillota
CCC
Gly
>WENV180009368
FLSC01002021
343027
Bacillota
TTG
Gln
>WENV180010126
FLSC01319784
151836
Bacillota
TCT
Arg
>WENV180009925
FLSC01171484
151836
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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