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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
61 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170658701
JTFP01183447
339412
Bacteroidota
GGT
Thr
>WENV170658048
JTFP01049162
267954
Bacteroidota
GCC
Gly
>WENV170658599
JTFP01159238
267954
Bacteroidota
GCC
Gly
>WENV170658552
JTFP01141795
61800
Bacteroidota
TAA
Leu
>WENV170658217
JTFP01069360
237796
Bacteroidota
CGT
Thr
>WENV170658290
JTFP01082276
147942
Bacteroidota
GTC
Asp
>WENV170658291
JTFP01082276
147942
Bacteroidota
GTC
Asp
>WENV170658066
JTFP01050639
340120
Bacteroidota
CCT
Arg
>WENV170658490
JTFP01122981
258903
Bacteroidota
>WENV170658061
JTFP01049798
258903
Bacteroidota
>WENV170658656
JTFP01173904
394247
Bacteroidota
CTC
Glu
>WENV170657919
JTFP01033379
394247
Bacteroidota
CTC
Glu
>WENV170658328
JTFP01087748
81682
Bacteroidota
GTA
Tyr
>WENV170658317
JTFP01085058
127221
Bacteroidota
TAC
Val
>WENV170658316
JTFP01085058
127221
Bacteroidota
TAC
Val
>WENV170658522
JTFP01131953
237247
Bacteroidota
TTT
Lys
>WENV170658323
JTFP01087289
237247
Bacteroidota
TTT
Lys
>WENV170657632
JTFP01005710
237247
Bacteroidota
TTT
Lys
>WENV170658738
JTFP01196684
147147
Bacteroidota
GTG
His
>WENV170658659
JTFP01174997
155123
Bacteroidota
GTT
Asn
>WENV170658329
JTFP01087748
268513
Bacteroidota
TCC
Gly
>WENV170658649
JTFP01171249
238671
Bacteroidota
TTT
Lys
>WENV170657570
JTFP01002194
181746
Bacteroidota
GGC
Ala
>WENV170657730
JTFP01013026
58714
Bacteroidota
CAA
Leu
>WENV170658651
JTFP01171604
235165
Bacteroidota
CCA
Trp
>WENV170658593
JTFP01157636
301449
Bacteroidota
CGG
Pro
>WENV170658579
JTFP01149247
301449
Bacteroidota
CGG
Pro
>WENV170658384
JTFP01097729
301449
Bacteroidota
CGG
Pro
>WENV170658333
JTFP01087933
144933
Bacteroidota
TCT
Arg
>WENV170658208
JTFP01068041
57145
Bacteroidota
TGA
Ser
>WENV170658591
JTFP01156467
53439
Bacteroidota
TGA
Ser
>WENV170658351
JTFP01092050
143758
Bacteroidota
TGG
Pro
>WENV170657539
JTFP01000627
235207
Bacteroidota
CAT
Met
>WENV170658551
JTFP01141795
238670
Bacteroidota
GCC
Gly
>WENV170658352
JTFP01092050
147944
Bacteroidota
TCT
Arg
>WENV170658163
JTFP01062588
238756
Bacteroidota
CAT
Met
>WENV170658044
JTFP01048465
144590
Bacteroidota
GTT
Asn
>WENV170658043
JTFP01048465
144590
Bacteroidota
GTT
Asn
>WENV170657598
JTFP01004474
144590
Bacteroidota
GTT
Asn
>WENV170658535
JTFP01136282
251411
Bacteroidota
GAA
Phe
>WENV170657581
JTFP01003287
368991
Bacteroidota
TTC
Glu
>WENV170658453
JTFP01114357
354570
Bacteroidota
TTC
Glu
>WENV170658029
JTFP01047137
412494
Bacteroidota
CCA
Trp
>WENV170657801
JTFP01020920
338165
Bacteroidota
GGT
Thr
>WENV170658510
JTFP01128914
147940
Bacteroidota
GTG
His
>WENV170658617
JTFP01163401
147945
Bacteroidota
CAT
Met
>WENV170658724
JTFP01191646
19317
Bacteroidota
GGA
Ser
>WENV170658330
JTFP01087748
343032
Bacteroidota
GGT
Thr
>WENV170657879
JTFP01028601
146762
Bacteroidota
TGG
Pro
>WENV170658288
JTFP01081974
23696
Bacteroidota
GCT
Ser
>WENV170658350
JTFP01092050
45287
Bacteroidota
GCT
Ser
>WENV170657868
JTFP01027250
340028
Bacteroidota
TTC
Glu
>WENV170658475
JTFP01118526
48914
Bacteroidota
TGA
Ser
>WENV170657666
JTFP01007553
48914
Bacteroidota
TGA
Ser
>WENV170658525
JTFP01133302
338125
Bacteroidota
CCT
Arg
>WENV170658520
JTFP01130667
338125
Bacteroidota
CCT
Arg
>WENV170657829
JTFP01023555
338125
Bacteroidota
CCT
Arg
>WENV170658327
JTFP01087748
147941
Bacteroidota
TGT
Thr
>WENV170658223
JTFP01069775
235129
Bacteroidota
GCC
Gly
>WENV170657983
JTFP01040646
235129
Bacteroidota
GCC
Gly
>WENV170658570
JTFP01147612
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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