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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170657838
JTFP01025452
95608
Campylobacterota
CAA
Leu
>WENV170658541
JTFP01138397
95609
Campylobacterota
TAG
Leu
>WENV170658148
JTFP01060050
235419
Campylobacterota
TTC
Glu
>WENV170657679
JTFP01009159
170960
Campylobacterota
TCG
Arg
>WENV170658516
JTFP01130390
170960
Campylobacterota
TCG
Arg
>WENV170658745
JTFP01199744
170960
Campylobacterota
TCG
Arg
>WENV170657957
JTFP01037463
155988
Campylobacterota
TCT
Arg
>WENV170657960
JTFP01037463
155988
Campylobacterota
TCT
Arg
>WENV170658497
JTFP01124295
292009
Campylobacterota
CCA
Trp
>WENV170658518
JTFP01130482
144885
Campylobacterota
GAT
Ile
>WENV170658410
JTFP01106822
338276
Campylobacterota
GGT
Thr
>WENV170657901
JTFP01031557
161529
Campylobacterota
CAT
Met
>WENV170657899
JTFP01031557
161529
Campylobacterota
CAT
Met
>WENV170658140
JTFP01058968
144882
Campylobacterota
CAT
Met
>WENV170657823
JTFP01023065
191925
Campylobacterota
GTC
Asp
>WENV170657649
JTFP01006569
338365
Campylobacterota
GGT
Thr
>WENV170657822
JTFP01023065
307596
Campylobacterota
TAC
Val
>WENV170658035
JTFP01047762
52927
Campylobacterota
GGA
Ser
>WENV170658259
JTFP01076957
254246
Campylobacterota
CCA
Trp
>WENV170657678
JTFP01009159
170959
Campylobacterota
GTG
His
>WENV170657955
JTFP01037463
127427
Campylobacterota
TGG
Pro
>WENV170658624
JTFP01164019
149516
Campylobacterota
CAT
Met
>WENV170657820
JTFP01023065
254365
Campylobacterota
TTT
Lys
>WENV170657956
JTFP01037463
162008
Campylobacterota
GTG
His
>WENV170658142
JTFP01058968
377610
Campylobacterota
TTG
Gln
>WENV170658641
JTFP01170184
101222
Campylobacterota
TAG
Leu
>WENV170657958
JTFP01037463
101222
Campylobacterota
TAG
Leu
>WENV170658113
JTFP01055848
305336
Campylobacterota
GCA
Cys
>WENV170657784
JTFP01019403
44915
Campylobacterota
GGA
Ser
>WENV170658642
JTFP01170184
157046
Campylobacterota
TCC
Gly
>WENV170658345
JTFP01090478
157046
Campylobacterota
TCC
Gly
>WENV170658138
JTFP01058968
157046
Campylobacterota
TCC
Gly
>WENV170657961
JTFP01037463
157046
Campylobacterota
TCC
Gly
>WENV170657959
JTFP01037463
157046
Campylobacterota
TCC
Gly
>WENV170658625
JTFP01164019
154128
Campylobacterota
TGT
Thr
>WENV170658343
JTFP01090478
154128
Campylobacterota
TGT
Thr
>WENV170658141
JTFP01058968
154128
Campylobacterota
TGT
Thr
>WENV170658344
JTFP01090478
99019
Campylobacterota
GTA
Tyr
>WENV170657741
JTFP01013915
338447
Campylobacterota
TTC
Glu
>WENV170657821
JTFP01023065
350386
Campylobacterota
TTC
Glu
>WENV170658112
JTFP01055848
38000
Campylobacterota
TGA
Ser
>WENV170658342
JTFP01090478
249181
Campylobacterota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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