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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170705912
LNAP01000612
367760
Bacillota
TTG
Gln
>WENV170707818
LNAP01035046
339630
Bacillota
GCC
Gly
>WENV170705624
LNAP01000030
163876
Bacillota
GGG
Pro
>WENV170708041
LNAP01045946
163876
Bacillota
GGG
Pro
>WENV170708067
LNAP01047633
163876
Bacillota
GGG
Pro
>WENV170706301
LNAP01001925
341876
Bacillota
TTG
Gln
>WENV170705723
LNAP01000148
370458
Bacillota
GCC
Gly
>WENV170705739
LNAP01000168
370458
Bacillota
GCC
Gly
>WENV170705859
LNAP01000498
370458
Bacillota
GCC
Gly
>WENV170705913
LNAP01000612
370458
Bacillota
GCC
Gly
>WENV170705614
LNAP01000021
16663
Bacillota
GCT
Ser
>WENV170705960
LNAP01000716
16663
Bacillota
GCT
Ser
>WENV170707911
LNAP01039339
16810
Bacillota
CGA
Ser
>WENV170707874
LNAP01037556
339265
Bacillota
TTC
Glu
>WENV170708334
LNAP01070975
119569
Bacillota
CAA
Leu
>WENV170705744
LNAP01000168
119569
Bacillota
CAA
Leu
>WENV170708199
LNAP01057805
27491
Bacillota
TGA
Ser
>WENV170705884
LNAP01000568
10594
Bacillota
GCT
Ser
>WENV170707762
LNAP01032935
59971
Bacillota
CAG
Leu
>WENV170705858
LNAP01000498
59971
Bacillota
CAG
Leu
>WENV170705765
LNAP01000236
59971
Bacillota
CAG
Leu
>WENV170706097
LNAP01001080
146971
Bacillota
TGG
Pro
>WENV170705861
LNAP01000498
146971
Bacillota
TGG
Pro
>WENV170708515
LNAP01090271
16661
Bacillota
CGA
Ser
>WENV170707975
LNAP01042661
277200
Bacillota
GGC
Ala
>WENV170708177
LNAP01055701
353527
Bacillota
TTC
Glu
>WENV170708359
LNAP01072888
187795
Bacillota
TCT
Arg
>WENV170705613
LNAP01000021
243478
Bacillota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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