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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170705608
LNAP01000013
160600
Bacillota
TCT
Arg
>WENV170705607
LNAP01000013
449074
Bacillota
CCC
Gly
>WENV170705613
LNAP01000021
282383
Bacillota
GTT
Asn
>WENV170705614
LNAP01000021
18472
Bacillota
GCT
Ser
>WENV170705617
LNAP01000021
106096
Bacillota
GAG
Leu
>WENV170705624
LNAP01000030
201770
Bacillota
GGG
Pro
>WENV170705670
LNAP01000104
201770
Bacillota
GGG
Pro
>WENV170705738
LNAP01000168
371078
Bacillota
TTG
Gln
>WENV170705740
LNAP01000168
451735
Bacillota
GCA
Cys
>WENV170705765
LNAP01000236
65152
Bacillota
CAG
Leu
>WENV170705779
LNAP01000267
449074
Bacillota
CCC
Gly
>WENV170705813
LNAP01000374
106047
Bacillota
GAG
Leu
>WENV170705829
LNAP01000419
28652
Bacillota
TGA
Ser
>WENV170705858
LNAP01000498
65152
Bacillota
CAG
Leu
>WENV170705883
LNAP01000568
391103
Bacillota
CCG
Arg
>WENV170705885
LNAP01000568
177808
Bacillota
CAT
Met
>WENV170705911
LNAP01000612
268370
Bacillota
GTG
His
>WENV170705960
LNAP01000716
18472
Bacillota
GCT
Ser
>WENV170706051
LNAP01001002
277787
Bacillota
GAC
Val
>WENV170706302
LNAP01001925
106047
Bacillota
GAG
Leu
>WENV170706300
LNAP01001925
268370
Bacillota
GTG
His
>WENV170707762
LNAP01032935
65152
Bacillota
CAG
Leu
>WENV170707786
LNAP01034165
167810
Bacillota
TCT
Arg
>WENV170707818
LNAP01035046
369167
Bacillota
GCC
Gly
>WENV170707990
LNAP01043150
89128
Bacillota
GTA
Tyr
>WENV170708082
LNAP01048845
277787
Bacillota
GAC
Val
>WENV170708199
LNAP01057805
27317
Bacillota
TGA
Ser
>WENV170708347
LNAP01071747
95608
Bacillota
GTA
Tyr
>WENV170708398
LNAP01078091
183347
Bacillota
>WENV170708416
LNAP01079655
391103
Bacillota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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