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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170710380
LNFM01001659
146962
Bacteroidota
CAT
Met
>WENV170708928
LNFM01000033
162266
Bacteroidota
CAT
Met
>WENV170709008
LNFM01000068
119517
Bacteroidota
CAA
Leu
>WENV170713843
LNFM01044077
256428
Bacteroidota
GAA
Phe
>WENV170714527
LNFM01079515
256428
Bacteroidota
GAA
Phe
>WENV170709948
LNFM01000967
127464
Bacteroidota
TAC
Val
>WENV170709949
LNFM01000967
127464
Bacteroidota
TAC
Val
>WENV170708990
LNFM01000058
237606
Bacteroidota
GCC
Gly
>WENV170708989
LNFM01000058
415980
Bacteroidota
TTG
Gln
>WENV170710513
LNFM01001929
95728
Bacteroidota
GTA
Tyr
>WENV170710319
LNFM01001525
95728
Bacteroidota
GTA
Tyr
>WENV170709878
LNFM01000840
241469
Bacteroidota
GAA
Phe
>WENV170715124
LNFM01136748
161504
Bacteroidota
TGC
Ala
>WENV170714544
LNFM01080354
161504
Bacteroidota
TGC
Ala
>WENV170714386
LNFM01070824
161504
Bacteroidota
TGC
Ala
>WENV170712960
LNFM01021198
352304
Bacteroidota
CCT
Arg
>WENV170710747
LNFM01002543
159029
Bacteroidota
GTG
His
>WENV170710515
LNFM01001929
412189
Bacteroidota
CCA
Trp
>WENV170708929
LNFM01000033
413186
Bacteroidota
>WENV170711206
LNFM01004018
24425
Bacteroidota
GCT
Ser
>WENV170711189
LNFM01003935
148318
Bacteroidota
GTT
Asn
>WENV170713307
LNFM01028506
251069
Bacteroidota
TCC
Gly
>WENV170713277
LNFM01027763
251069
Bacteroidota
TCC
Gly
>WENV170711625
LNFM01006141
343008
Bacteroidota
TTC
Glu
>WENV170711624
LNFM01006141
343008
Bacteroidota
TTC
Glu
>WENV170710514
LNFM01001929
342872
Bacteroidota
GGT
Thr
>WENV170714882
LNFM01111444
145155
Bacteroidota
GGC
Ala
>WENV170713033
LNFM01022597
145155
Bacteroidota
GGC
Ala
>WENV170711960
LNFM01008659
145155
Bacteroidota
GGC
Ala
>WENV170713587
LNFM01035278
150543
Bacteroidota
GAT
Ile
>WENV170714260
LNFM01064099
159335
Bacteroidota
GTT
Asn
>WENV170713035
LNFM01022636
347866
Bacteroidota
TTC
Glu
>WENV170710026
LNFM01001075
347866
Bacteroidota
TTC
Glu
>WENV170711269
LNFM01004280
236053
Bacteroidota
TTT
Lys
>WENV170709011
LNFM01000068
96696
Bacteroidota
TAG
Leu
>WENV170708991
LNFM01000058
37199
Bacteroidota
TAA
Leu
>WENV170711773
LNFM01007250
45130
Bacteroidota
TGA
Ser
>WENV170713165
LNFM01025344
256304
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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