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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
78 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170792680
MDSV01103501
387387
Cyanobacteriota
GAC
Val
>WENV170790157
MDSV01061608
366531
Cyanobacteriota
TTG
Gln
>WENV170788927
MDSV01041713
373624
Cyanobacteriota
TTG
Gln
>WENV170792337
MDSV01097968
373624
Cyanobacteriota
TTG
Gln
>WENV170793545
MDSV01118097
373624
Cyanobacteriota
TTG
Gln
>WENV170800271
MDSV01227303
373624
Cyanobacteriota
TTG
Gln
>WENV170795883
MDSV01155504
109616
Cyanobacteriota
GTA
Tyr
>WENV170788079
MDSV01027305
237009
Cyanobacteriota
GGC
Ala
>WENV170789145
MDSV01045569
162341
Cyanobacteriota
TCT
Arg
>WENV170796952
MDSV01172218
162341
Cyanobacteriota
TCT
Arg
>WENV170797692
MDSV01184512
162341
Cyanobacteriota
TCT
Arg
>WENV170800843
MDSV01237108
162341
Cyanobacteriota
TCT
Arg
>WENV170792401
MDSV01099033
267489
Cyanobacteriota
GGC
Ala
>WENV170790590
MDSV01068667
267489
Cyanobacteriota
GGC
Ala
>WENV170789877
MDSV01056905
267489
Cyanobacteriota
GGC
Ala
>WENV170789265
MDSV01047479
267489
Cyanobacteriota
GGC
Ala
>WENV170788821
MDSV01040110
267489
Cyanobacteriota
GGC
Ala
>WENV170801160
MDSV01242077
267489
Cyanobacteriota
GGC
Ala
>WENV170800983
MDSV01239270
267489
Cyanobacteriota
GGC
Ala
>WENV170800503
MDSV01231221
267489
Cyanobacteriota
GGC
Ala
>WENV170799576
MDSV01215734
267489
Cyanobacteriota
GGC
Ala
>WENV170798788
MDSV01202293
267489
Cyanobacteriota
GGC
Ala
>WENV170796167
MDSV01160026
267489
Cyanobacteriota
GGC
Ala
>WENV170795606
MDSV01151634
267489
Cyanobacteriota
GGC
Ala
>WENV170794942
MDSV01140004
267489
Cyanobacteriota
GGC
Ala
>WENV170788493
MDSV01034482
145761
Cyanobacteriota
GTC
Asp
>WENV170791135
MDSV01077513
306125
Cyanobacteriota
GTG
His
>WENV170790394
MDSV01065342
306125
Cyanobacteriota
GTG
His
>WENV170789757
MDSV01054844
306125
Cyanobacteriota
GTG
His
>WENV170796726
MDSV01168720
306125
Cyanobacteriota
GTG
His
>WENV170791935
MDSV01091278
164907
Cyanobacteriota
GGG
Pro
>WENV170801562
MDSV01249003
164907
Cyanobacteriota
GGG
Pro
>WENV170797454
MDSV01180567
164907
Cyanobacteriota
GGG
Pro
>WENV170798828
MDSV01203183
173121
Cyanobacteriota
GTC
Asp
>WENV170790690
MDSV01070349
339686
Cyanobacteriota
TAC
Val
>WENV170794501
MDSV01133052
339686
Cyanobacteriota
TAC
Val
>WENV170788256
MDSV01030574
349164
Cyanobacteriota
TGT
Thr
>WENV170788503
MDSV01034687
338782
Cyanobacteriota
GTT
Asn
>WENV170792761
MDSV01104499
149253
Cyanobacteriota
ACG
Arg
>WENV170792154
MDSV01095139
149253
Cyanobacteriota
ACG
Arg
>WENV170798777
MDSV01202068
245150
Cyanobacteriota
GTG
His
>WENV170797504
MDSV01181363
245150
Cyanobacteriota
GTG
His
>WENV170801258
MDSV01243923
23971
Cyanobacteriota
TGA
Ser
>WENV170795564
MDSV01150774
23971
Cyanobacteriota
TGA
Ser
>WENV170789175
MDSV01046015
153717
Cyanobacteriota
CAT
Met
>WENV170799531
MDSV01215116
153717
Cyanobacteriota
CAT
Met
>WENV170796832
MDSV01170410
153717
Cyanobacteriota
CAT
Met
>WENV170795196
MDSV01144338
153717
Cyanobacteriota
CAT
Met
>WENV170796760
MDSV01169333
344607
Cyanobacteriota
CCC
Gly
>WENV170792381
MDSV01098682
305373
Cyanobacteriota
CGC
Ala
>WENV170792204
MDSV01096101
339688
Cyanobacteriota
GAC
Val
>WENV170797625
MDSV01183253
339688
Cyanobacteriota
GAC
Val
>WENV170796604
MDSV01166762
58999
Cyanobacteriota
CAG
Leu
>WENV170798282
MDSV01193923
148812
Cyanobacteriota
CGG
Pro
>WENV170793426
MDSV01116057
190971
Cyanobacteriota
GTC
Asp
>WENV170800775
MDSV01235832
190971
Cyanobacteriota
GTC
Asp
>WENV170789756
MDSV01054844
80908
Cyanobacteriota
CAA
Leu
>WENV170788932
MDSV01041836
80908
Cyanobacteriota
CAA
Leu
>WENV170795013
MDSV01141228
80908
Cyanobacteriota
CAA
Leu
>WENV170788889
MDSV01040922
11030
Cyanobacteriota
GCT
Ser
>WENV170799292
MDSV01211124
11030
Cyanobacteriota
GCT
Ser
>WENV170794415
MDSV01131924
11030
Cyanobacteriota
GCT
Ser
>WENV170788358
MDSV01032136
37223
Cyanobacteriota
TAA
Leu
>WENV170790159
MDSV01061622
240100
Cyanobacteriota
CAT
Met
>WENV170796802
MDSV01169727
95762
Cyanobacteriota
AAG
Leu
>WENV170791961
MDSV01091800
147238
Cyanobacteriota
CCG
Arg
>WENV170788788
MDSV01039430
147238
Cyanobacteriota
CCG
Arg
>WENV170800613
MDSV01233215
147238
Cyanobacteriota
CCG
Arg
>WENV170797818
MDSV01186773
147238
Cyanobacteriota
CCG
Arg
>WENV170796139
MDSV01159654
147238
Cyanobacteriota
CCG
Arg
>WENV170787713
MDSV01022266
341034
Cyanobacteriota
GGT
Thr
>WENV170800957
MDSV01238828
341034
Cyanobacteriota
GGT
Thr
>WENV170793682
MDSV01120360
341034
Cyanobacteriota
GGT
Thr
>WENV170788933
MDSV01041836
68425
Cyanobacteriota
CAG
Leu
>WENV170795012
MDSV01141228
68425
Cyanobacteriota
CAG
Leu
>WENV170792887
MDSV01106881
145893
Cyanobacteriota
CAT
Met
>WENV170789228
MDSV01046860
145893
Cyanobacteriota
CAT
Met
>WENV170797005
MDSV01173325
145893
Cyanobacteriota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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