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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170965693
MTEV01000331
255946
Betaproteobacteria
TGT
Thr
>WENV170965697
MTEV01000581
6969
Betaproteobacteria
GCT
Ser
>WENV170965706
MTEV01000828
243370
Betaproteobacteria
CGT
Thr
>WENV170965732
MTEV01001344
352197
Betaproteobacteria
GGT
Thr
>WENV170965749
MTEV01001912
99533
Betaproteobacteria
CAG
Leu
>WENV170965751
MTEV01001991
267870
Betaproteobacteria
TTC
Glu
>WENV170965757
MTEV01002027
412213
Betaproteobacteria
CCC
Gly
>WENV170965787
MTEV01003620
95890
Betaproteobacteria
CAA
Leu
>WENV170965848
MTEV01006753
162621
Betaproteobacteria
TTG
Gln
>WENV170965899
MTEV01008883
63422
Betaproteobacteria
CAG
Leu
>WENV170965901
MTEV01008979
339576
Betaproteobacteria
CCT
Arg
>WENV170965905
MTEV01009198
237684
Betaproteobacteria
TGT
Thr
>WENV170965909
MTEV01009421
146751
Betaproteobacteria
TGG
Pro
>WENV170965910
MTEV01009421
146760
Betaproteobacteria
TCT
Arg
>WENV170965960
MTEV01010760
63422
Betaproteobacteria
CAG
Leu
>WENV170965961
MTEV01010773
412213
Betaproteobacteria
CCC
Gly
>WENV170965970
MTEV01011115
4907
Betaproteobacteria
GCT
Ser
>WENV170965976
MTEV01011323
172608
Betaproteobacteria
TTG
Gln
>WENV170966031
MTEV01012213
339575
Betaproteobacteria
CAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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