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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180106659
OAPF01000001
366531
Cyanobacteriota
TTG
Gln
>WENV180106660
OAPF01000001
147238
Cyanobacteriota
CCG
Arg
>WENV180106664
OAPF01000007
306125
Cyanobacteriota
GTG
His
>WENV180106666
OAPF01000016
411836
Cyanobacteriota
TCC
Gly
>WENV180106667
OAPF01000019
240100
Cyanobacteriota
CAT
Met
>WENV180106668
OAPF01000021
37357
Cyanobacteriota
TAA
Leu
>WENV180106669
OAPF01000027
95762
Cyanobacteriota
AAG
Leu
>WENV180106671
OAPF01000054
109616
Cyanobacteriota
GTA
Tyr
>WENV180106672
OAPF01000068
23971
Cyanobacteriota
TGA
Ser
>WENV180106679
OAPF01000163
145761
Cyanobacteriota
GTC
Asp
>WENV180106680
OAPF01000174
145893
Cyanobacteriota
CAT
Met
>WENV180106683
OAPF01000248
158847
Cyanobacteriota
GAT
Ile
>WENV180106692
OAPF01000334
149253
Cyanobacteriota
ACG
Arg
>WENV180106715
OAPF01000756
164907
Cyanobacteriota
GGG
Pro
>WENV180106730
OAPF01001183
96363
Cyanobacteriota
TAG
Leu
>WENV180106745
OAPF01001726
144929
Cyanobacteriota
CAT
Met
>WENV180106749
OAPF01001909
23668
Cyanobacteriota
TGA
Ser
>WENV180106847
OAPF01006705
162346
Cyanobacteriota
GGG
Pro
>WENV180106851
OAPF01007123
339686
Cyanobacteriota
TAC
Val
>WENV180106863
OAPF01007857
25356
Cyanobacteriota
GGA
Ser
>WENV180106870
OAPF01008193
310428
Cyanobacteriota
TGC
Ala
>WENV180106874
OAPF01008696
341034
Cyanobacteriota
GGT
Thr
>WENV180106875
OAPF01008857
237899
Cyanobacteriota
CCA
Trp
>WENV180107043
OAPF01023642
339688
Cyanobacteriota
GAC
Val
>WENV180107118
OAPF01034509
267489
Cyanobacteriota
GGC
Ala
>WENV180107246
OAPF01075594
80908
Cyanobacteriota
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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