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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
114 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180189374
OAWY01000008
235097
Bacteroidota
TTT
Lys
>WENV180189427
OAWY01000054
235097
Bacteroidota
TTT
Lys
>WENV180189538
OAWY01000233
235097
Bacteroidota
TTT
Lys
>WENV180189555
OAWY01000298
235097
Bacteroidota
TTT
Lys
>WENV180189610
OAWY01000597
235102
Bacteroidota
CGT
Thr
>WENV180189400
OAWY01000030
144657
Bacteroidota
CGG
Pro
>WENV180189762
OAWY01001773
144657
Bacteroidota
CGG
Pro
>WENV180189679
OAWY01000914
338155
Bacteroidota
CTC
Glu
>WENV180189439
OAWY01000067
339341
Bacteroidota
GGT
Thr
>WENV180189399
OAWY01000029
343138
Bacteroidota
CCT
Arg
>WENV180189834
OAWY01003502
58715
Bacteroidota
GAG
Leu
>WENV180189433
OAWY01000063
58715
Bacteroidota
GAG
Leu
>WENV180189388
OAWY01000017
46165
Bacteroidota
TGA
Ser
>WENV180189532
OAWY01000213
338486
Bacteroidota
CAT
Met
>WENV180189463
OAWY01000112
338486
Bacteroidota
CAT
Met
>WENV180189416
OAWY01000050
338486
Bacteroidota
CAT
Met
>WENV180189391
OAWY01000020
338486
Bacteroidota
CAT
Met
>WENV180189432
OAWY01000063
59689
Bacteroidota
CAG
Leu
>WENV180189405
OAWY01000030
59689
Bacteroidota
CAG
Leu
>WENV180189378
OAWY01000012
436206
Bacteroidota
TTG
Gln
>WENV180189465
OAWY01000122
20893
Bacteroidota
GGA
Ser
>WENV180189403
OAWY01000030
20893
Bacteroidota
GGA
Ser
>WENV180189389
OAWY01000017
20893
Bacteroidota
GGA
Ser
>WENV180189370
OAWY01000006
338124
Bacteroidota
CCG
Arg
>WENV180189547
OAWY01000275
235203
Bacteroidota
TTT
Lys
>WENV180189382
OAWY01000016
235203
Bacteroidota
TTT
Lys
>WENV180189528
OAWY01000204
238121
Bacteroidota
CTT
Lys
>WENV180189527
OAWY01000204
238121
Bacteroidota
CTT
Lys
>WENV180189386
OAWY01000017
238121
Bacteroidota
CTT
Lys
>WENV180189385
OAWY01000017
238121
Bacteroidota
CTT
Lys
>WENV180189700
OAWY01001135
126641
Bacteroidota
TAC
Val
>WENV180189699
OAWY01001135
126641
Bacteroidota
TAC
Val
>WENV180189790
OAWY01002322
338132
Bacteroidota
GCA
Cys
>WENV180189662
OAWY01000838
338132
Bacteroidota
GCA
Cys
>WENV180189582
OAWY01000452
338132
Bacteroidota
GCA
Cys
>WENV180189581
OAWY01000442
338132
Bacteroidota
GCA
Cys
>WENV180189563
OAWY01000334
338132
Bacteroidota
GCA
Cys
>WENV180189511
OAWY01000172
338132
Bacteroidota
GCA
Cys
>WENV180189459
OAWY01000110
338132
Bacteroidota
GCA
Cys
>WENV180189387
OAWY01000017
45423
Bacteroidota
TGA
Ser
>WENV180189523
OAWY01000189
193809
Bacteroidota
CAT
Met
>WENV180189585
OAWY01000480
58714
Bacteroidota
CAA
Leu
>WENV180189359
OAWY01000002
301449
Bacteroidota
CGG
Pro
>WENV180189975
OAWY01018585
144933
Bacteroidota
TCT
Arg
>WENV180189656
OAWY01000811
144933
Bacteroidota
TCT
Arg
>WENV180189457
OAWY01000102
144933
Bacteroidota
TCT
Arg
>WENV180189367
OAWY01000003
144656
Bacteroidota
GTG
His
>WENV180189859
OAWY01004396
235207
Bacteroidota
CAT
Met
>WENV180189454
OAWY01000100
235207
Bacteroidota
CAT
Met
>WENV180189453
OAWY01000099
235207
Bacteroidota
CAT
Met
>WENV180189549
OAWY01000284
144659
Bacteroidota
GTG
His
>WENV180189550
OAWY01000284
144659
Bacteroidota
GTG
His
>WENV180189440
OAWY01000067
235180
Bacteroidota
CCA
Trp
>WENV180189401
OAWY01000030
235180
Bacteroidota
CCA
Trp
>WENV180189907
OAWY01006928
235180
Bacteroidota
CCA
Trp
>WENV180189721
OAWY01001359
144596
Bacteroidota
GGC
Ala
>WENV180189510
OAWY01000171
80607
Bacteroidota
GTA
Tyr
>WENV180189363
OAWY01000002
80607
Bacteroidota
GTA
Tyr
>WENV180189520
OAWY01000178
113604
Bacteroidota
>WENV180189517
OAWY01000178
113604
Bacteroidota
>WENV180189719
OAWY01001299
16999
Bacteroidota
GGA
Ser
>WENV180189638
OAWY01000760
80614
Bacteroidota
>WENV180189477
OAWY01000138
80614
Bacteroidota
>WENV180189438
OAWY01000067
80614
Bacteroidota
>WENV180189384
OAWY01000016
80614
Bacteroidota
>WENV180189361
OAWY01000002
144590
Bacteroidota
GTT
Asn
>WENV180189360
OAWY01000002
144590
Bacteroidota
GTT
Asn
>WENV180189507
OAWY01000166
95559
Bacteroidota
TAG
Leu
>WENV180189379
OAWY01000014
419272
Bacteroidota
CTG
Gln
>WENV180189412
OAWY01000041
144655
Bacteroidota
GGC
Ala
>WENV180189398
OAWY01000029
338164
Bacteroidota
TTC
Glu
>WENV180189397
OAWY01000029
338164
Bacteroidota
TTC
Glu
>WENV180189640
OAWY01000767
95875
Bacteroidota
TAG
Leu
>WENV180189608
OAWY01000586
95875
Bacteroidota
TAG
Leu
>WENV180189733
OAWY01001491
139743
Bacteroidota
GGG
Pro
>WENV180189630
OAWY01000727
139743
Bacteroidota
GGG
Pro
>WENV180189449
OAWY01000093
139743
Bacteroidota
GGG
Pro
>WENV180189381
OAWY01000014
139743
Bacteroidota
GGG
Pro
>WENV180189369
OAWY01000005
139743
Bacteroidota
GGG
Pro
>WENV180189456
OAWY01000102
240012
Bacteroidota
CCC
Gly
>WENV180189434
OAWY01000065
240012
Bacteroidota
CCC
Gly
>WENV180189373
OAWY01000007
44852
Bacteroidota
TAA
Leu
>WENV180189435
OAWY01000065
147439
Bacteroidota
TCT
Arg
>WENV180189984
OAWY01018665
411550
Bacteroidota
CTG
Gln
>WENV180189775
OAWY01001966
411550
Bacteroidota
CTG
Gln
>WENV180189584
OAWY01000479
19528
Bacteroidota
GGA
Ser
>WENV180189631
OAWY01000728
425638
Bacteroidota
CTG
Gln
>WENV180189548
OAWY01000282
425638
Bacteroidota
CTG
Gln
>WENV180189514
OAWY01000173
425638
Bacteroidota
CTG
Gln
>WENV180189448
OAWY01000093
425638
Bacteroidota
CTG
Gln
>WENV180189964
OAWY01016118
239647
Bacteroidota
TTT
Lys
>WENV180189668
OAWY01000885
239647
Bacteroidota
TTT
Lys
>WENV180189534
OAWY01000218
19317
Bacteroidota
GGA
Ser
>WENV180189899
OAWY01006276
185921
Bacteroidota
GTC
Asp
>WENV180189637
OAWY01000760
185921
Bacteroidota
GTC
Asp
>WENV180189544
OAWY01000245
185921
Bacteroidota
GTC
Asp
>WENV180189543
OAWY01000245
185921
Bacteroidota
GTC
Asp
>WENV180189678
OAWY01000914
23696
Bacteroidota
GCT
Ser
>WENV180189586
OAWY01000486
23696
Bacteroidota
GCT
Ser
>WENV180189533
OAWY01000218
55270
Bacteroidota
TGA
Ser
>WENV180189469
OAWY01000127
55270
Bacteroidota
TGA
Ser
>WENV180189468
OAWY01000123
55270
Bacteroidota
TGA
Ser
>WENV180189455
OAWY01000101
55270
Bacteroidota
TGA
Ser
>WENV180189395
OAWY01000023
55270
Bacteroidota
TGA
Ser
>WENV180189368
OAWY01000003
16224
Bacteroidota
GGA
Ser
>WENV180189380
OAWY01000014
16220
Bacteroidota
GGA
Ser
>WENV180189371
OAWY01000007
338125
Bacteroidota
CCT
Arg
>WENV180189824
OAWY01003201
235129
Bacteroidota
GCC
Gly
>WENV180189601
OAWY01000573
235129
Bacteroidota
GCC
Gly
>WENV180189599
OAWY01000573
235129
Bacteroidota
GCC
Gly
>WENV180189542
OAWY01000243
235129
Bacteroidota
GCC
Gly
>WENV180189540
OAWY01000243
235129
Bacteroidota
GCC
Gly
>WENV180189431
OAWY01000063
235129
Bacteroidota
GCC
Gly
>WENV180189703
OAWY01001147
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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