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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
61 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180195036
OAZY01000838
235146
Actinomycetota
CGT
Thr
>WENV180194949
OAZY01000485
119475
Actinomycetota
TAA
Leu
>WENV180195211
OAZY01003222
235347
Actinomycetota
GGC
Ala
>WENV180195212
OAZY01003222
235347
Actinomycetota
GGC
Ala
>WENV180194741
OAZY01000092
144589
Actinomycetota
ACG
Arg
>WENV180194742
OAZY01000092
144589
Actinomycetota
ACG
Arg
>WENV180194884
OAZY01000292
37070
Actinomycetota
CGA
Ser
>WENV180194919
OAZY01000402
201717
Actinomycetota
CTT
Lys
>WENV180195163
OAZY01002164
235092
Actinomycetota
CCG
Arg
>WENV180194815
OAZY01000165
158720
Actinomycetota
ACG
Arg
>WENV180194814
OAZY01000165
158720
Actinomycetota
ACG
Arg
>WENV180195165
OAZY01002273
411601
Actinomycetota
CCC
Gly
>WENV180195056
OAZY01000947
23370
Actinomycetota
GCT
Ser
>WENV180195161
OAZY01002145
338239
Actinomycetota
TTC
Glu
>WENV180194838
OAZY01000188
16219
Actinomycetota
GCT
Ser
>WENV180194845
OAZY01000198
235174
Actinomycetota
TGC
Ala
>WENV180194873
OAZY01000258
235101
Actinomycetota
TTT
Lys
>WENV180195140
OAZY01001857
121510
Actinomycetota
TAA
Leu
>WENV180195351
OAZY01021239
356045
Actinomycetota
GAC
Val
>WENV180195142
OAZY01001880
356045
Actinomycetota
GAC
Val
>WENV180194929
OAZY01000435
144625
Actinomycetota
GTC
Asp
>WENV180194928
OAZY01000435
144625
Actinomycetota
GTC
Asp
>WENV180195088
OAZY01001286
44855
Actinomycetota
TGA
Ser
>WENV180194806
OAZY01000136
145345
Actinomycetota
TAC
Val
>WENV180195143
OAZY01001880
235199
Actinomycetota
CAC
Val
>WENV180195061
OAZY01000992
44862
Actinomycetota
CGA
Ser
>WENV180194738
OAZY01000091
16223
Actinomycetota
GAG
Leu
>WENV180195089
OAZY01001290
144593
Actinomycetota
TAT
Ile
>WENV180195055
OAZY01000947
144700
Actinomycetota
CAT
Met
>WENV180194839
OAZY01000188
98279
Actinomycetota
GTA
Tyr
>WENV180194956
OAZY01000496
338148
Actinomycetota
CTG
Gln
>WENV180194891
OAZY01000317
338148
Actinomycetota
CTG
Gln
>WENV180195122
OAZY01001618
235148
Actinomycetota
GTT
Asn
>WENV180195121
OAZY01001618
235148
Actinomycetota
GTT
Asn
>WENV180194710
OAZY01000060
235148
Actinomycetota
GTT
Asn
>WENV180194704
OAZY01000060
235148
Actinomycetota
GTT
Asn
>WENV180194954
OAZY01000496
53078
Actinomycetota
GGA
Ser
>WENV180194829
OAZY01000180
176456
Actinomycetota
TCT
Arg
>WENV180195018
OAZY01000750
144825
Actinomycetota
CAT
Met
>WENV180195052
OAZY01000935
235348
Actinomycetota
CCT
Arg
>WENV180195002
OAZY01000683
37521
Actinomycetota
GCT
Ser
>WENV180194906
OAZY01000350
411554
Actinomycetota
CCC
Gly
>WENV180194895
OAZY01000320
113601
Actinomycetota
TAG
Leu
>WENV180195136
OAZY01001776
144595
Actinomycetota
CAA
Leu
>WENV180194739
OAZY01000091
144595
Actinomycetota
CAA
Leu
>WENV180194709
OAZY01000060
145343
Actinomycetota
GGG
Pro
>WENV180194842
OAZY01000195
235149
Actinomycetota
CCT
Arg
>WENV180194905
OAZY01000350
91808
Actinomycetota
CAG
Leu
>WENV180194894
OAZY01000320
235121
Actinomycetota
CGT
Thr
>WENV180194927
OAZY01000435
393408
Actinomycetota
TTC
Glu
>WENV180194740
OAZY01000091
144635
Actinomycetota
TGG
Pro
>WENV180194885
OAZY01000292
44851
Actinomycetota
TGA
Ser
>WENV180194994
OAZY01000678
16222
Actinomycetota
GAG
Leu
>WENV180194846
OAZY01000198
235173
Actinomycetota
GGC
Ala
>WENV180194703
OAZY01000060
235173
Actinomycetota
GGC
Ala
>WENV180195123
OAZY01001618
243162
Actinomycetota
GTT
Asn
>WENV180194972
OAZY01000530
144660
Actinomycetota
TAC
Val
>WENV180194743
OAZY01000092
278447
Actinomycetota
GTG
His
>WENV180195003
OAZY01000683
411599
Actinomycetota
TTG
Gln
>WENV180195054
OAZY01000947
95593
Actinomycetota
>WENV180195098
OAZY01001373
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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