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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
98 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180234768
OBCT01000029
235097
Bacteroidota
TTT
Lys
>WENV180234814
OBCT01000072
235097
Bacteroidota
TTT
Lys
>WENV180234863
OBCT01000139
235097
Bacteroidota
TTT
Lys
>WENV180234872
OBCT01000159
235097
Bacteroidota
TTT
Lys
>WENV180234828
OBCT01000085
235102
Bacteroidota
CGT
Thr
>WENV180234840
OBCT01000109
235102
Bacteroidota
CGT
Thr
>WENV180234951
OBCT01000343
144657
Bacteroidota
CGG
Pro
>WENV180234936
OBCT01000276
243025
Bacteroidota
CAT
Met
>WENV180234749
OBCT01000020
339341
Bacteroidota
GGT
Thr
>WENV180234833
OBCT01000099
343138
Bacteroidota
CCT
Arg
>WENV180234918
OBCT01000229
58715
Bacteroidota
GAG
Leu
>WENV180235304
OBCT01040566
95618
Bacteroidota
TAG
Leu
>WENV180234854
OBCT01000128
338486
Bacteroidota
CAT
Met
>WENV180234820
OBCT01000076
338486
Bacteroidota
CAT
Met
>WENV180234917
OBCT01000229
59689
Bacteroidota
CAG
Leu
>WENV180234879
OBCT01000167
59689
Bacteroidota
CAG
Leu
>WENV180235215
OBCT01007770
436206
Bacteroidota
TTG
Gln
>WENV180234827
OBCT01000083
436206
Bacteroidota
TTG
Gln
>WENV180234772
OBCT01000034
436206
Bacteroidota
TTG
Gln
>WENV180234935
OBCT01000270
20893
Bacteroidota
GGA
Ser
>WENV180234865
OBCT01000150
20893
Bacteroidota
GGA
Ser
>WENV180234950
OBCT01000341
338124
Bacteroidota
CCG
Arg
>WENV180234780
OBCT01000040
338124
Bacteroidota
CCG
Arg
>WENV180234915
OBCT01000227
235203
Bacteroidota
TTT
Lys
>WENV180234848
OBCT01000120
235203
Bacteroidota
TTT
Lys
>WENV180234743
OBCT01000019
238121
Bacteroidota
CTT
Lys
>WENV180234742
OBCT01000019
238121
Bacteroidota
CTT
Lys
>WENV180235359
OBCT01096114
126641
Bacteroidota
TAC
Val
>WENV180235210
OBCT01007029
338132
Bacteroidota
GCA
Cys
>WENV180234921
OBCT01000241
338132
Bacteroidota
GCA
Cys
>WENV180234861
OBCT01000136
338132
Bacteroidota
GCA
Cys
>WENV180234824
OBCT01000081
338132
Bacteroidota
GCA
Cys
>WENV180234821
OBCT01000077
338132
Bacteroidota
GCA
Cys
>WENV180235208
OBCT01006758
144688
Bacteroidota
CAT
Met
>WENV180234744
OBCT01000019
45423
Bacteroidota
TGA
Ser
>WENV180234751
OBCT01000021
193809
Bacteroidota
CAT
Met
>WENV180234812
OBCT01000067
58714
Bacteroidota
CAA
Leu
>WENV180234773
OBCT01000036
301449
Bacteroidota
CGG
Pro
>WENV180234767
OBCT01000028
301449
Bacteroidota
CGG
Pro
>WENV180235074
OBCT01001009
144933
Bacteroidota
TCT
Arg
>WENV180234843
OBCT01000113
144656
Bacteroidota
GTG
His
>WENV180235149
OBCT01002767
235207
Bacteroidota
CAT
Met
>WENV180234931
OBCT01000267
235207
Bacteroidota
CAT
Met
>WENV180234842
OBCT01000112
235207
Bacteroidota
CAT
Met
>WENV180234996
OBCT01000440
143169
Bacteroidota
GGG
Pro
>WENV180234984
OBCT01000408
143169
Bacteroidota
GGG
Pro
>WENV180234944
OBCT01000301
143169
Bacteroidota
GGG
Pro
>WENV180234799
OBCT01000054
143169
Bacteroidota
GGG
Pro
>WENV180234775
OBCT01000037
143169
Bacteroidota
GGG
Pro
>WENV180234893
OBCT01000179
144659
Bacteroidota
GTG
His
>WENV180234892
OBCT01000179
144659
Bacteroidota
GTG
His
>WENV180234952
OBCT01000343
235180
Bacteroidota
CCA
Trp
>WENV180234750
OBCT01000020
235180
Bacteroidota
CCA
Trp
>WENV180235065
OBCT01000945
144596
Bacteroidota
GGC
Ala
>WENV180235009
OBCT01000511
80607
Bacteroidota
GTA
Tyr
>WENV180234845
OBCT01000114
80607
Bacteroidota
GTA
Tyr
>WENV180234762
OBCT01000024
80607
Bacteroidota
GTA
Tyr
>WENV180234891
OBCT01000179
80614
Bacteroidota
>WENV180234810
OBCT01000064
80614
Bacteroidota
>WENV180234748
OBCT01000020
80614
Bacteroidota
>WENV180234794
OBCT01000048
154643
Bacteroidota
CAT
Met
>WENV180234864
OBCT01000148
95559
Bacteroidota
TAG
Leu
>WENV180235046
OBCT01000741
144655
Bacteroidota
GGC
Ala
>WENV180234889
OBCT01000177
338164
Bacteroidota
TTC
Glu
>WENV180234888
OBCT01000177
338164
Bacteroidota
TTC
Glu
>WENV180234887
OBCT01000177
338164
Bacteroidota
TTC
Glu
>WENV180234919
OBCT01000238
95875
Bacteroidota
TAG
Leu
>WENV180235127
OBCT01002094
338314
Bacteroidota
CCT
Arg
>WENV180234811
OBCT01000066
240012
Bacteroidota
CCC
Gly
>WENV180234782
OBCT01000042
44852
Bacteroidota
TAA
Leu
>WENV180234778
OBCT01000038
147439
Bacteroidota
TCT
Arg
>WENV180234724
OBCT01000012
411550
Bacteroidota
CTG
Gln
>WENV180235010
OBCT01000511
338165
Bacteroidota
GGT
Thr
>WENV180235013
OBCT01000521
19528
Bacteroidota
GGA
Ser
>WENV180234745
OBCT01000019
50727
Bacteroidota
TGA
Ser
>WENV180235336
OBCT01067798
425638
Bacteroidota
CTG
Gln
>WENV180234777
OBCT01000037
19317
Bacteroidota
GGA
Ser
>WENV180235211
OBCT01007213
94703
Bacteroidota
GTA
Tyr
>WENV180235174
OBCT01004035
94703
Bacteroidota
GTA
Tyr
>WENV180235165
OBCT01003372
94703
Bacteroidota
GTA
Tyr
>WENV180234955
OBCT01000347
94703
Bacteroidota
GTA
Tyr
>WENV180234838
OBCT01000103
353927
Bacteroidota
TTC
Glu
>WENV180235366
OBCT01096874
185921
Bacteroidota
GTC
Asp
>WENV180234730
OBCT01000014
414426
Bacteroidota
CTG
Gln
>WENV180235123
OBCT01001881
56823
Bacteroidota
TGA
Ser
>WENV180235122
OBCT01001779
56823
Bacteroidota
TGA
Ser
>WENV180234998
OBCT01000442
56823
Bacteroidota
TGA
Ser
>WENV180234831
OBCT01000092
56823
Bacteroidota
TGA
Ser
>WENV180234796
OBCT01000049
56823
Bacteroidota
TGA
Ser
>WENV180234784
OBCT01000043
56823
Bacteroidota
TGA
Ser
>WENV180235099
OBCT01001384
16224
Bacteroidota
GGA
Ser
>WENV180235045
OBCT01000731
16224
Bacteroidota
GGA
Ser
>WENV180234948
OBCT01000325
16220
Bacteroidota
GGA
Ser
>WENV180234783
OBCT01000042
338125
Bacteroidota
CCT
Arg
>WENV180234942
OBCT01000293
235129
Bacteroidota
GCC
Gly
>WENV180234929
OBCT01000259
235129
Bacteroidota
GCC
Gly
>WENV180234916
OBCT01000229
235129
Bacteroidota
GCC
Gly
>WENV180235203
OBCT01005722
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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