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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180379136
OBOP01004542
147089
Alphaproteobacteria
ACG
Arg
>WENV180379630
OBOP01087934
267922
Alphaproteobacteria
CCA
Trp
>WENV180379340
OBOP01018694
23468
Alphaproteobacteria
GCT
Ser
>WENV180379348
OBOP01020071
195945
Alphaproteobacteria
GAT
Ile
>WENV180379397
OBOP01024203
338282
Alphaproteobacteria
GTT
Asn
>WENV180379251
OBOP01011193
345376
Alphaproteobacteria
GAC
Val
>WENV180379090
OBOP01002594
281594
Alphaproteobacteria
TGT
Thr
>WENV180379960
OBOP01232649
283763
Alphaproteobacteria
TGC
Ala
>WENV180379664
OBOP01100408
161002
Alphaproteobacteria
GTG
His
>WENV180379074
OBOP01002261
359842
Alphaproteobacteria
GAC
Val
>WENV180379381
OBOP01023148
348781
Alphaproteobacteria
GAA
Phe
>WENV180379306
OBOP01014448
241518
Alphaproteobacteria
CCA
Trp
>WENV180379984
OBOP01249708
370641
Alphaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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