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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
65 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180419082
OBVM01000081
235146
Actinomycetota
CGT
Thr
>WENV180419409
OBVM01004513
413566
Actinomycetota
CCC
Gly
>WENV180419278
OBVM01000731
235347
Actinomycetota
GGC
Ala
>WENV180419279
OBVM01000731
235347
Actinomycetota
GGC
Ala
>WENV180419313
OBVM01001037
166493
Actinomycetota
CTT
Lys
>WENV180419320
OBVM01001103
166493
Actinomycetota
CTT
Lys
>WENV180419352
OBVM01001817
16400
Actinomycetota
GAG
Leu
>WENV180419438
OBVM01007925
144600
Actinomycetota
TGG
Pro
>WENV180419260
OBVM01000592
235194
Actinomycetota
GTG
His
>WENV180419271
OBVM01000629
273786
Actinomycetota
CGT
Thr
>WENV180419193
OBVM01000255
158720
Actinomycetota
ACG
Arg
>WENV180419192
OBVM01000255
158720
Actinomycetota
ACG
Arg
>WENV180419108
OBVM01000127
411601
Actinomycetota
CCC
Gly
>WENV180419227
OBVM01000389
144826
Actinomycetota
GGG
Pro
>WENV180419183
OBVM01000236
23370
Actinomycetota
GCT
Ser
>WENV180419132
OBVM01000164
338239
Actinomycetota
TTC
Glu
>WENV180419375
OBVM01002295
16219
Actinomycetota
GCT
Ser
>WENV180419185
OBVM01000242
235174
Actinomycetota
TGC
Ala
>WENV180419138
OBVM01000176
235101
Actinomycetota
TTT
Lys
>WENV180419152
OBVM01000203
121510
Actinomycetota
TAA
Leu
>WENV180419243
OBVM01000529
356045
Actinomycetota
GAC
Val
>WENV180419103
OBVM01000121
356045
Actinomycetota
GAC
Val
>WENV180419447
OBVM01011075
154640
Actinomycetota
CTT
Lys
>WENV180419414
OBVM01005381
145345
Actinomycetota
TAC
Val
>WENV180419244
OBVM01000529
235199
Actinomycetota
CAC
Val
>WENV180419104
OBVM01000121
235199
Actinomycetota
CAC
Val
>WENV180419124
OBVM01000149
44862
Actinomycetota
CGA
Ser
>WENV180419137
OBVM01000176
367535
Actinomycetota
CTG
Gln
>WENV180419277
OBVM01000731
413665
Actinomycetota
TTG
Gln
>WENV180419126
OBVM01000150
45154
Actinomycetota
TGA
Ser
>WENV180419201
OBVM01000290
254857
Actinomycetota
CCG
Arg
>WENV180419358
OBVM01001939
113703
Actinomycetota
TAG
Leu
>WENV180419182
OBVM01000236
144700
Actinomycetota
CAT
Met
>WENV180419311
OBVM01001025
45147
Actinomycetota
CGA
Ser
>WENV180419286
OBVM01000757
295695
Actinomycetota
CTC
Glu
>WENV180419136
OBVM01000176
295695
Actinomycetota
CTC
Glu
>WENV180419287
OBVM01000757
338148
Actinomycetota
CTG
Gln
>WENV180419309
OBVM01001000
235148
Actinomycetota
GTT
Asn
>WENV180419308
OBVM01001000
235148
Actinomycetota
GTT
Asn
>WENV180419453
OBVM01014062
260823
Actinomycetota
TGC
Ala
>WENV180419451
OBVM01013520
237792
Actinomycetota
CCT
Arg
>WENV180419247
OBVM01000547
113702
Actinomycetota
TAA
Leu
>WENV180419219
OBVM01000361
144825
Actinomycetota
CAT
Met
>WENV180419349
OBVM01001655
412399
Actinomycetota
CCC
Gly
>WENV180419385
OBVM01003015
119508
Actinomycetota
TAA
Leu
>WENV180419127
OBVM01000155
235348
Actinomycetota
CCT
Arg
>WENV180419365
OBVM01002066
237794
Actinomycetota
CCG
Arg
>WENV180419231
OBVM01000408
411554
Actinomycetota
CCC
Gly
>WENV180419272
OBVM01000629
113601
Actinomycetota
TAG
Leu
>WENV180419215
OBVM01000348
144595
Actinomycetota
CAA
Leu
>WENV180419384
OBVM01002916
51286
Actinomycetota
TGA
Ser
>WENV180419216
OBVM01000348
163764
Actinomycetota
TGG
Pro
>WENV180419357
OBVM01001939
235121
Actinomycetota
CGT
Thr
>WENV180419139
OBVM01000176
47164
Actinomycetota
GGA
Ser
>WENV180419416
OBVM01005989
429234
Actinomycetota
CTG
Gln
>WENV180419071
OBVM01000062
17009
Actinomycetota
GAG
Leu
>WENV180419225
OBVM01000381
80622
Actinomycetota
CAG
Leu
>WENV180419312
OBVM01001036
163948
Actinomycetota
CAT
Met
>WENV180419367
OBVM01002082
235173
Actinomycetota
GGC
Ala
>WENV180419307
OBVM01001000
243162
Actinomycetota
GTT
Asn
>WENV180419089
OBVM01000110
144660
Actinomycetota
TAC
Val
>WENV180419373
OBVM01002226
267574
Actinomycetota
CAC
Val
>WENV180419181
OBVM01000236
95593
Actinomycetota
>WENV180419295
OBVM01000842
144823
Actinomycetota
TCT
Arg
>WENV180419267
OBVM01000623
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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