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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
81 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180424994
OBVY01000038
235097
Bacteroidota
TTT
Lys
>WENV180425422
OBVY01000456
235102
Bacteroidota
CGT
Thr
>WENV180425055
OBVY01000063
144657
Bacteroidota
CGG
Pro
>WENV180425495
OBVY01000568
243025
Bacteroidota
CAT
Met
>WENV180424993
OBVY01000037
338155
Bacteroidota
CTC
Glu
>WENV180424946
OBVY01000009
339341
Bacteroidota
GGT
Thr
>WENV180425130
OBVY01000124
343138
Bacteroidota
CCT
Arg
>WENV180425212
OBVY01000184
58715
Bacteroidota
GAG
Leu
>WENV180425564
OBVY01000778
46165
Bacteroidota
TGA
Ser
>WENV180424923
OBVY01000002
46165
Bacteroidota
TGA
Ser
>WENV180425946
OBVY01003226
17323
Bacteroidota
GGA
Ser
>WENV180425435
OBVY01000472
338486
Bacteroidota
CAT
Met
>WENV180424950
OBVY01000010
338486
Bacteroidota
CAT
Met
>WENV180425360
OBVY01000347
415410
Bacteroidota
TTG
Gln
>WENV180425260
OBVY01000223
415410
Bacteroidota
TTG
Gln
>WENV180425211
OBVY01000184
59689
Bacteroidota
CAG
Leu
>WENV180425052
OBVY01000063
59689
Bacteroidota
CAG
Leu
>WENV180425562
OBVY01000778
344692
Bacteroidota
GGT
Thr
>WENV180425416
OBVY01000433
338124
Bacteroidota
CCG
Arg
>WENV180425527
OBVY01000683
235203
Bacteroidota
TTT
Lys
>WENV180425112
OBVY01000108
235203
Bacteroidota
TTT
Lys
>WENV180424926
OBVY01000002
238121
Bacteroidota
CTT
Lys
>WENV180424925
OBVY01000002
238121
Bacteroidota
CTT
Lys
>WENV180425947
OBVY01003253
338132
Bacteroidota
GCA
Cys
>WENV180425472
OBVY01000539
338132
Bacteroidota
GCA
Cys
>WENV180425440
OBVY01000487
338132
Bacteroidota
GCA
Cys
>WENV180424927
OBVY01000002
45423
Bacteroidota
TGA
Ser
>WENV180424922
OBVY01000001
58714
Bacteroidota
CAA
Leu
>WENV180425038
OBVY01000056
144933
Bacteroidota
TCT
Arg
>WENV180425027
OBVY01000054
144656
Bacteroidota
GTG
His
>WENV180425395
OBVY01000403
235207
Bacteroidota
CAT
Met
>WENV180425455
OBVY01000506
144659
Bacteroidota
GTG
His
>WENV180425454
OBVY01000506
144659
Bacteroidota
GTG
His
>WENV180425056
OBVY01000063
235180
Bacteroidota
CCA
Trp
>WENV180425432
OBVY01000470
80607
Bacteroidota
GTA
Tyr
>WENV180425193
OBVY01000177
80607
Bacteroidota
GTA
Tyr
>WENV180425111
OBVY01000107
80607
Bacteroidota
GTA
Tyr
>WENV180426411
OBVY01053625
113604
Bacteroidota
>WENV180425704
OBVY01001309
113604
Bacteroidota
>WENV180424955
OBVY01000013
16999
Bacteroidota
GGA
Ser
>WENV180425216
OBVY01000190
80614
Bacteroidota
>WENV180425066
OBVY01000069
80614
Bacteroidota
>WENV180425340
OBVY01000317
154643
Bacteroidota
CAT
Met
>WENV180426019
OBVY01003868
154643
Bacteroidota
CAT
Met
>WENV180425198
OBVY01000177
144590
Bacteroidota
GTT
Asn
>WENV180425303
OBVY01000272
95559
Bacteroidota
TAG
Leu
>WENV180425152
OBVY01000144
419272
Bacteroidota
CTG
Gln
>WENV180425009
OBVY01000049
144655
Bacteroidota
GGC
Ala
>WENV180425132
OBVY01000124
338164
Bacteroidota
TTC
Glu
>WENV180425131
OBVY01000124
338164
Bacteroidota
TTC
Glu
>WENV180424920
OBVY01000001
95875
Bacteroidota
TAG
Leu
>WENV180425331
OBVY01000294
240012
Bacteroidota
CCC
Gly
>WENV180425157
OBVY01000146
44852
Bacteroidota
TAA
Leu
>WENV180425274
OBVY01000239
147439
Bacteroidota
TCT
Arg
>WENV180425064
OBVY01000068
411550
Bacteroidota
CTG
Gln
>WENV180425063
OBVY01000068
411550
Bacteroidota
CTG
Gln
>WENV180425230
OBVY01000197
338165
Bacteroidota
GGT
Thr
>WENV180425003
OBVY01000044
19528
Bacteroidota
GGA
Ser
>WENV180426447
OBVY01086365
50727
Bacteroidota
TGA
Ser
>WENV180426003
OBVY01003681
50727
Bacteroidota
TGA
Ser
>WENV180425451
OBVY01000504
50727
Bacteroidota
TGA
Ser
>WENV180425002
OBVY01000044
50727
Bacteroidota
TGA
Ser
>WENV180425524
OBVY01000657
132360
Bacteroidota
GGG
Pro
>WENV180425477
OBVY01000548
132360
Bacteroidota
GGG
Pro
>WENV180425497
OBVY01000576
425638
Bacteroidota
CTG
Gln
>WENV180424945
OBVY01000008
425638
Bacteroidota
CTG
Gln
>WENV180426054
OBVY01004390
353927
Bacteroidota
TTC
Glu
>WENV180425513
OBVY01000623
353927
Bacteroidota
TTC
Glu
>WENV180424949
OBVY01000009
185921
Bacteroidota
GTC
Asp
>WENV180424948
OBVY01000009
185921
Bacteroidota
GTC
Asp
>WENV180425994
OBVY01003637
146530
Bacteroidota
TGT
Thr
>WENV180424992
OBVY01000037
23696
Bacteroidota
GCT
Ser
>WENV180424979
OBVY01000029
414426
Bacteroidota
CTG
Gln
>WENV180425028
OBVY01000054
16224
Bacteroidota
GGA
Ser
>WENV180425553
OBVY01000753
151960
Bacteroidota
GGC
Ala
>WENV180425153
OBVY01000144
16220
Bacteroidota
GGA
Ser
>WENV180425155
OBVY01000146
338125
Bacteroidota
CCT
Arg
>WENV180424928
OBVY01000004
338125
Bacteroidota
CCT
Arg
>WENV180425210
OBVY01000184
235129
Bacteroidota
GCC
Gly
>WENV180425178
OBVY01000162
235129
Bacteroidota
GCC
Gly
>WENV180425176
OBVY01000162
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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