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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180452826
OBXK01000426
16469
Bacillota
GCT
Ser
>WENV180452818
OBXK01000426
163776
Bacillota
TGG
Pro
>WENV180452829
OBXK01000426
158247
Bacillota
>WENV180452833
OBXK01000426
415708
Bacillota
CCA
Trp
>WENV180452634
OBXK01000066
339825
Bacillota
CCG
Arg
>WENV180452934
OBXK01005270
155040
Bacillota
GAT
Ile
>WENV180452831
OBXK01000426
239201
Bacillota
GAA
Phe
>WENV180452823
OBXK01000426
239201
Bacillota
GAA
Phe
>WENV180452710
OBXK01000160
238494
Bacillota
GGC
Ala
>WENV180452806
OBXK01000387
412345
Bacillota
CTG
Gln
>WENV180452906
OBXK01001296
147758
Bacillota
CGG
Pro
>WENV180452870
OBXK01000587
237265
Bacillota
TAC
Val
>WENV180452813
OBXK01000426
237265
Bacillota
TAC
Val
>WENV180452641
OBXK01000073
147760
Bacillota
TCT
Arg
>WENV180452827
OBXK01000426
339151
Bacillota
TTC
Glu
>WENV180452702
OBXK01000148
339151
Bacillota
TTC
Glu
>WENV180452862
OBXK01000557
339935
Bacillota
GTT
Asn
>WENV180452834
OBXK01000426
238496
Bacillota
GTG
His
>WENV180452703
OBXK01000148
237346
Bacillota
CGT
Thr
>WENV180452837
OBXK01000426
59329
Bacillota
CAA
Leu
>WENV180452940
OBXK01006280
80954
Bacillota
TAG
Leu
>WENV180452744
OBXK01000239
6999
Bacillota
GGA
Ser
>WENV180452941
OBXK01006577
147135
Bacillota
ACG
Arg
>WENV180452836
OBXK01000426
412406
Bacillota
GCA
Cys
>WENV180452774
OBXK01000337
16440
Bacillota
CGA
Ser
>WENV180452814
OBXK01000426
238497
Bacillota
TTT
Lys
>WENV180452921
OBXK01002170
241471
Bacillota
TGC
Ala
>WENV180452819
OBXK01000426
146741
Bacillota
CAT
Met
>WENV180452709
OBXK01000160
238493
Bacillota
CGC
Ala
>WENV180452735
OBXK01000214
412403
Bacillota
CCC
Gly
>WENV180452767
OBXK01000316
45242
Bacillota
CAG
Leu
>WENV180452782
OBXK01000342
347434
Bacillota
CTC
Glu
>WENV180452817
OBXK01000426
166238
Bacillota
ACG
Arg
>WENV180452828
OBXK01000426
3285
Bacillota
TGA
Ser
>WENV180452701
OBXK01000148
37258
Bacillota
AAG
Leu
>WENV180452882
OBXK01000692
238495
Bacillota
>WENV180452832
OBXK01000426
113740
Bacillota
GTA
Tyr
>WENV180452700
OBXK01000148
113740
Bacillota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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