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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
81 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180461901
OBYB01000002
235097
Bacteroidota
TTT
Lys
>WENV180462002
OBYB01000077
235097
Bacteroidota
TTT
Lys
>WENV180462112
OBYB01000185
235097
Bacteroidota
TTT
Lys
>WENV180462139
OBYB01000251
235097
Bacteroidota
TTT
Lys
>WENV180462058
OBYB01000130
235102
Bacteroidota
CGT
Thr
>WENV180462219
OBYB01000554
144657
Bacteroidota
CGG
Pro
>WENV180462170
OBYB01000334
126966
Bacteroidota
TAC
Val
>WENV180462171
OBYB01000334
126966
Bacteroidota
TAC
Val
>WENV180462276
OBYB01000833
126965
Bacteroidota
GGG
Pro
>WENV180462093
OBYB01000159
343138
Bacteroidota
CCT
Arg
>WENV180462718
OBYB01039980
343138
Bacteroidota
CCT
Arg
>WENV180461988
OBYB01000067
58715
Bacteroidota
GAG
Leu
>WENV180462578
OBYB01009572
46165
Bacteroidota
TGA
Ser
>WENV180462018
OBYB01000088
24174
Bacteroidota
GCT
Ser
>WENV180462196
OBYB01000434
338486
Bacteroidota
CAT
Met
>WENV180461909
OBYB01000007
338486
Bacteroidota
CAT
Met
>WENV180461987
OBYB01000067
59689
Bacteroidota
CAG
Leu
>WENV180461981
OBYB01000059
59689
Bacteroidota
CAG
Leu
>WENV180462070
OBYB01000137
436206
Bacteroidota
TTG
Gln
>WENV180462291
OBYB01000934
20893
Bacteroidota
GGA
Ser
>WENV180462193
OBYB01000423
155123
Bacteroidota
GTT
Asn
>WENV180462192
OBYB01000423
155123
Bacteroidota
GTT
Asn
>WENV180462035
OBYB01000104
338124
Bacteroidota
CCG
Arg
>WENV180462234
OBYB01000606
235203
Bacteroidota
TTT
Lys
>WENV180461996
OBYB01000073
235203
Bacteroidota
TTT
Lys
>WENV180462414
OBYB01002071
238121
Bacteroidota
CTT
Lys
>WENV180462834
OBYB01103694
126641
Bacteroidota
TAC
Val
>WENV180462128
OBYB01000228
338132
Bacteroidota
GCA
Cys
>WENV180462101
OBYB01000168
338132
Bacteroidota
GCA
Cys
>WENV180461936
OBYB01000018
338132
Bacteroidota
GCA
Cys
>WENV180462388
OBYB01001800
45423
Bacteroidota
TGA
Ser
>WENV180462049
OBYB01000117
193809
Bacteroidota
CAT
Met
>WENV180461934
OBYB01000017
58714
Bacteroidota
CAA
Leu
>WENV180462236
OBYB01000614
301449
Bacteroidota
CGG
Pro
>WENV180462024
OBYB01000096
301449
Bacteroidota
CGG
Pro
>WENV180461933
OBYB01000016
301449
Bacteroidota
CGG
Pro
>WENV180462841
OBYB01104691
144933
Bacteroidota
TCT
Arg
>WENV180462166
OBYB01000327
144656
Bacteroidota
GTG
His
>WENV180462073
OBYB01000150
144656
Bacteroidota
GTG
His
>WENV180462216
OBYB01000544
235207
Bacteroidota
CAT
Met
>WENV180462053
OBYB01000125
235207
Bacteroidota
CAT
Met
>WENV180462046
OBYB01000113
144659
Bacteroidota
GTG
His
>WENV180462045
OBYB01000113
144659
Bacteroidota
GTG
His
>WENV180462044
OBYB01000113
144659
Bacteroidota
GTG
His
>WENV180462220
OBYB01000554
235180
Bacteroidota
CCA
Trp
>WENV180462175
OBYB01000359
144596
Bacteroidota
GGC
Ala
>WENV180462713
OBYB01035181
80607
Bacteroidota
GTA
Tyr
>WENV180462655
OBYB01019686
80607
Bacteroidota
GTA
Tyr
>WENV180462152
OBYB01000293
80607
Bacteroidota
GTA
Tyr
>WENV180461898
OBYB01000002
80607
Bacteroidota
GTA
Tyr
>WENV180462461
OBYB01002834
16999
Bacteroidota
GGA
Ser
>WENV180462043
OBYB01000113
80614
Bacteroidota
>WENV180461995
OBYB01000073
80614
Bacteroidota
>WENV180462842
OBYB01104725
144590
Bacteroidota
GTT
Asn
>WENV180462042
OBYB01000111
95559
Bacteroidota
TAG
Leu
>WENV180461955
OBYB01000033
419272
Bacteroidota
CTG
Gln
>WENV180462052
OBYB01000120
144655
Bacteroidota
GGC
Ala
>WENV180462165
OBYB01000325
338164
Bacteroidota
TTC
Glu
>WENV180461935
OBYB01000017
95875
Bacteroidota
TAG
Leu
>WENV180462314
OBYB01001092
139743
Bacteroidota
GGG
Pro
>WENV180461928
OBYB01000011
240012
Bacteroidota
CCC
Gly
>WENV180462007
OBYB01000080
44852
Bacteroidota
TAA
Leu
>WENV180461929
OBYB01000011
147439
Bacteroidota
TCT
Arg
>WENV180462153
OBYB01000293
338165
Bacteroidota
GGT
Thr
>WENV180462475
OBYB01003511
425638
Bacteroidota
CTG
Gln
>WENV180462442
OBYB01002569
425638
Bacteroidota
CTG
Gln
>WENV180462003
OBYB01000078
425638
Bacteroidota
CTG
Gln
>WENV180462473
OBYB01003441
19317
Bacteroidota
GGA
Ser
>WENV180461906
OBYB01000004
185921
Bacteroidota
GTC
Asp
>WENV180461905
OBYB01000004
185921
Bacteroidota
GTC
Asp
>WENV180462156
OBYB01000302
23696
Bacteroidota
GCT
Ser
>WENV180462507
OBYB01004581
55270
Bacteroidota
TGA
Ser
>WENV180462472
OBYB01003441
55270
Bacteroidota
TGA
Ser
>WENV180462187
OBYB01000399
55270
Bacteroidota
TGA
Ser
>WENV180462047
OBYB01000114
55270
Bacteroidota
TGA
Ser
>WENV180461899
OBYB01000002
55270
Bacteroidota
TGA
Ser
>WENV180461956
OBYB01000033
16220
Bacteroidota
GGA
Ser
>WENV180461985
OBYB01000063
338125
Bacteroidota
CCT
Arg
>WENV180462262
OBYB01000761
235129
Bacteroidota
GCC
Gly
>WENV180462014
OBYB01000086
235129
Bacteroidota
GCC
Gly
>WENV180461986
OBYB01000067
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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