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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
110 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180513714
OCHB01000031
235097
Bacteroidota
TTT
Lys
>WENV180513971
OCHB01000206
235097
Bacteroidota
TTT
Lys
>WENV180514573
OCHB01001947
235097
Bacteroidota
TTT
Lys
>WENV180514303
OCHB01000744
235102
Bacteroidota
CGT
Thr
>WENV180513730
OCHB01000040
267954
Bacteroidota
GCC
Gly
>WENV180513997
OCHB01000241
144657
Bacteroidota
CGG
Pro
>WENV180513627
OCHB01000001
243025
Bacteroidota
CAT
Met
>WENV180514061
OCHB01000305
338155
Bacteroidota
CTC
Glu
>WENV180514249
OCHB01000649
153993
Bacteroidota
GAT
Ile
>WENV180514666
OCHB01004176
339341
Bacteroidota
GGT
Thr
>WENV180514320
OCHB01000780
58715
Bacteroidota
GAG
Leu
>WENV180513947
OCHB01000178
17323
Bacteroidota
GGA
Ser
>WENV180514017
OCHB01000260
338486
Bacteroidota
CAT
Met
>WENV180513676
OCHB01000013
338486
Bacteroidota
CAT
Met
>WENV180514194
OCHB01000538
48053
Bacteroidota
TGA
Ser
>WENV180513703
OCHB01000024
415410
Bacteroidota
TTG
Gln
>WENV180513940
OCHB01000171
415410
Bacteroidota
TTG
Gln
>WENV180513925
OCHB01000146
415410
Bacteroidota
TTG
Gln
>WENV180515166
OCHB01133728
136244
Bacteroidota
TAC
Val
>WENV180514672
OCHB01004345
411543
Bacteroidota
CTG
Gln
>WENV180514845
OCHB01018860
59689
Bacteroidota
CAG
Leu
>WENV180514149
OCHB01000445
20893
Bacteroidota
GGA
Ser
>WENV180513651
OCHB01000005
344692
Bacteroidota
GGT
Thr
>WENV180514026
OCHB01000266
145504
Bacteroidota
TGT
Thr
>WENV180514722
OCHB01005920
235182
Bacteroidota
>WENV180514086
OCHB01000343
338124
Bacteroidota
CCG
Arg
>WENV180514145
OCHB01000437
238121
Bacteroidota
CTT
Lys
>WENV180514144
OCHB01000437
238121
Bacteroidota
CTT
Lys
>WENV180514483
OCHB01001406
126641
Bacteroidota
TAC
Val
>WENV180514182
OCHB01000511
126641
Bacteroidota
TAC
Val
>WENV180513682
OCHB01000015
126641
Bacteroidota
TAC
Val
>WENV180513681
OCHB01000015
126641
Bacteroidota
TAC
Val
>WENV180514570
OCHB01001933
338132
Bacteroidota
GCA
Cys
>WENV180514095
OCHB01000363
338132
Bacteroidota
GCA
Cys
>WENV180514056
OCHB01000300
338132
Bacteroidota
GCA
Cys
>WENV180513630
OCHB01000002
338132
Bacteroidota
GCA
Cys
>WENV180514772
OCHB01010578
144688
Bacteroidota
CAT
Met
>WENV180514090
OCHB01000353
193809
Bacteroidota
CAT
Met
>WENV180513752
OCHB01000048
235165
Bacteroidota
CCA
Trp
>WENV180514064
OCHB01000310
280660
Bacteroidota
CCA
Trp
>WENV180514346
OCHB01000867
301449
Bacteroidota
CGG
Pro
>WENV180513983
OCHB01000231
301449
Bacteroidota
CGG
Pro
>WENV180513913
OCHB01000140
301449
Bacteroidota
CGG
Pro
>WENV180513839
OCHB01000090
301449
Bacteroidota
CGG
Pro
>WENV180513709
OCHB01000030
301449
Bacteroidota
CGG
Pro
>WENV180513924
OCHB01000145
144933
Bacteroidota
TCT
Arg
>WENV180513675
OCHB01000013
144933
Bacteroidota
TCT
Arg
>WENV180513804
OCHB01000069
303954
Bacteroidota
GCC
Gly
>WENV180513803
OCHB01000069
303954
Bacteroidota
GCC
Gly
>WENV180513748
OCHB01000048
303954
Bacteroidota
GCC
Gly
>WENV180513984
OCHB01000232
144656
Bacteroidota
GTG
His
>WENV180514185
OCHB01000524
235207
Bacteroidota
CAT
Met
>WENV180513813
OCHB01000072
144596
Bacteroidota
GGC
Ala
>WENV180514787
OCHB01011729
80607
Bacteroidota
GTA
Tyr
>WENV180514053
OCHB01000298
80607
Bacteroidota
GTA
Tyr
>WENV180513894
OCHB01000125
80607
Bacteroidota
GTA
Tyr
>WENV180513728
OCHB01000038
80607
Bacteroidota
GTA
Tyr
>WENV180513712
OCHB01000031
80607
Bacteroidota
GTA
Tyr
>WENV180514428
OCHB01001095
113604
Bacteroidota
>WENV180514202
OCHB01000559
80614
Bacteroidota
>WENV180515054
OCHB01069405
52358
Bacteroidota
TGA
Ser
>WENV180514504
OCHB01001473
52358
Bacteroidota
TGA
Ser
>WENV180514311
OCHB01000759
52358
Bacteroidota
TGA
Ser
>WENV180514041
OCHB01000283
52358
Bacteroidota
TGA
Ser
>WENV180513980
OCHB01000230
52358
Bacteroidota
TGA
Ser
>WENV180513972
OCHB01000209
52358
Bacteroidota
TGA
Ser
>WENV180513968
OCHB01000203
52358
Bacteroidota
TGA
Ser
>WENV180513814
OCHB01000073
52358
Bacteroidota
TGA
Ser
>WENV180513622
OCHB01000001
154643
Bacteroidota
CAT
Met
>WENV180515163
OCHB01133623
144590
Bacteroidota
GTT
Asn
>WENV180513883
OCHB01000119
95559
Bacteroidota
TAG
Leu
>WENV180513738
OCHB01000044
419272
Bacteroidota
CTG
Gln
>WENV180513820
OCHB01000074
144655
Bacteroidota
GGC
Ala
>WENV180513764
OCHB01000054
144639
Bacteroidota
GGC
Ala
>WENV180513707
OCHB01000028
95875
Bacteroidota
TAG
Leu
>WENV180514289
OCHB01000688
151121
Bacteroidota
CAT
Met
>WENV180514710
OCHB01005517
338314
Bacteroidota
CCT
Arg
>WENV180513677
OCHB01000013
240012
Bacteroidota
CCC
Gly
>WENV180513811
OCHB01000071
44852
Bacteroidota
TAA
Leu
>WENV180514924
OCHB01028251
280513
Bacteroidota
TTT
Lys
>WENV180514070
OCHB01000320
280513
Bacteroidota
TTT
Lys
>WENV180513639
OCHB01000004
150485
Bacteroidota
GTT
Asn
>WENV180513638
OCHB01000004
150485
Bacteroidota
GTT
Asn
>WENV180514837
OCHB01017156
411550
Bacteroidota
CTG
Gln
>WENV180515155
OCHB01131638
338165
Bacteroidota
GGT
Thr
>WENV180514506
OCHB01001490
19528
Bacteroidota
GGA
Ser
>WENV180513815
OCHB01000073
19528
Bacteroidota
GGA
Ser
>WENV180513882
OCHB01000118
132360
Bacteroidota
GGG
Pro
>WENV180513740
OCHB01000044
132360
Bacteroidota
GGG
Pro
>WENV180513648
OCHB01000005
132360
Bacteroidota
GGG
Pro
>WENV180514085
OCHB01000341
425638
Bacteroidota
CTG
Gln
>WENV180514069
OCHB01000317
425638
Bacteroidota
CTG
Gln
>WENV180513921
OCHB01000143
425638
Bacteroidota
CTG
Gln
>WENV180513683
OCHB01000015
425638
Bacteroidota
CTG
Gln
>WENV180513825
OCHB01000077
239647
Bacteroidota
TTT
Lys
>WENV180513702
OCHB01000023
239647
Bacteroidota
TTT
Lys
>WENV180513973
OCHB01000209
19317
Bacteroidota
GGA
Ser
>WENV180513641
OCHB01000004
353927
Bacteroidota
TTC
Glu
>WENV180513640
OCHB01000004
353927
Bacteroidota
TTC
Glu
>WENV180513850
OCHB01000094
185921
Bacteroidota
GTC
Asp
>WENV180513629
OCHB01000002
185921
Bacteroidota
GTC
Asp
>WENV180513842
OCHB01000091
414426
Bacteroidota
CTG
Gln
>WENV180513985
OCHB01000232
16224
Bacteroidota
GGA
Ser
>WENV180514711
OCHB01005553
151960
Bacteroidota
GGC
Ala
>WENV180513739
OCHB01000044
16220
Bacteroidota
GGA
Ser
>WENV180514225
OCHB01000598
338125
Bacteroidota
CCT
Arg
>WENV180513821
OCHB01000075
338125
Bacteroidota
CCT
Arg
>WENV180513812
OCHB01000071
338125
Bacteroidota
CCT
Arg
>WENV180513746
OCHB01000047
235129
Bacteroidota
GCC
Gly
>WENV180513955
OCHB01000187
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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