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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
77 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180578513
OCMC01000065
235097
Bacteroidota
TTT
Lys
>WENV180578560
OCMC01000130
235097
Bacteroidota
TTT
Lys
>WENV180578668
OCMC01000409
235097
Bacteroidota
TTT
Lys
>WENV180578526
OCMC01000078
235102
Bacteroidota
CGT
Thr
>WENV180578662
OCMC01000391
235102
Bacteroidota
CGT
Thr
>WENV180579152
OCMC01048653
267954
Bacteroidota
GCC
Gly
>WENV180578929
OCMC01006860
144657
Bacteroidota
CGG
Pro
>WENV180578580
OCMC01000158
243025
Bacteroidota
CAT
Met
>WENV180579077
OCMC01028947
338155
Bacteroidota
CTC
Glu
>WENV180579208
OCMC01075997
153993
Bacteroidota
GAT
Ile
>WENV180578750
OCMC01001196
343138
Bacteroidota
CCT
Arg
>WENV180578849
OCMC01003318
58715
Bacteroidota
GAG
Leu
>WENV180579194
OCMC01069197
17323
Bacteroidota
GGA
Ser
>WENV180578963
OCMC01009553
338486
Bacteroidota
CAT
Met
>WENV180578682
OCMC01000552
415410
Bacteroidota
TTG
Gln
>WENV180578432
OCMC01000007
415410
Bacteroidota
TTG
Gln
>WENV180578798
OCMC01002349
59689
Bacteroidota
CAG
Leu
>WENV180579014
OCMC01018232
188343
Bacteroidota
TGC
Ala
>WENV180579216
OCMC01079986
341950
Bacteroidota
>WENV180578595
OCMC01000198
338124
Bacteroidota
CCG
Arg
>WENV180578506
OCMC01000057
338124
Bacteroidota
CCG
Arg
>WENV180578931
OCMC01006882
238121
Bacteroidota
CTT
Lys
>WENV180578984
OCMC01013252
126641
Bacteroidota
TAC
Val
>WENV180579335
OCMC01150874
338132
Bacteroidota
GCA
Cys
>WENV180578708
OCMC01000815
338132
Bacteroidota
GCA
Cys
>WENV180578702
OCMC01000762
338132
Bacteroidota
GCA
Cys
>WENV180578621
OCMC01000245
338132
Bacteroidota
GCA
Cys
>WENV180578542
OCMC01000102
338132
Bacteroidota
GCA
Cys
>WENV180578842
OCMC01003181
144933
Bacteroidota
TCT
Arg
>WENV180578528
OCMC01000081
144656
Bacteroidota
GTG
His
>WENV180578893
OCMC01004945
235207
Bacteroidota
CAT
Met
>WENV180578599
OCMC01000205
235207
Bacteroidota
CAT
Met
>WENV180578535
OCMC01000088
235207
Bacteroidota
CAT
Met
>WENV180579343
OCMC01162723
144659
Bacteroidota
GTG
His
>WENV180579175
OCMC01059382
235180
Bacteroidota
CCA
Trp
>WENV180578930
OCMC01006860
235180
Bacteroidota
CCA
Trp
>WENV180578713
OCMC01000903
144596
Bacteroidota
GGC
Ala
>WENV180579046
OCMC01023831
80607
Bacteroidota
GTA
Tyr
>WENV180578670
OCMC01000423
80607
Bacteroidota
GTA
Tyr
>WENV180578464
OCMC01000026
80607
Bacteroidota
GTA
Tyr
>WENV180579367
OCMC01191284
80614
Bacteroidota
>WENV180578556
OCMC01000125
154643
Bacteroidota
CAT
Met
>WENV180579385
OCMC01193117
144590
Bacteroidota
GTT
Asn
>WENV180578644
OCMC01000302
95559
Bacteroidota
TAG
Leu
>WENV180578827
OCMC01002680
419272
Bacteroidota
CTG
Gln
>WENV180578492
OCMC01000047
419272
Bacteroidota
CTG
Gln
>WENV180578752
OCMC01001310
144655
Bacteroidota
GGC
Ala
>WENV180578749
OCMC01001196
338164
Bacteroidota
TTC
Glu
>WENV180578923
OCMC01006531
240012
Bacteroidota
CCC
Gly
>WENV180578639
OCMC01000277
44852
Bacteroidota
TAA
Leu
>WENV180578797
OCMC01002315
147439
Bacteroidota
TCT
Arg
>WENV180579237
OCMC01087136
280513
Bacteroidota
TTT
Lys
>WENV180578966
OCMC01009815
338165
Bacteroidota
GGT
Thr
>WENV180578851
OCMC01003325
19528
Bacteroidota
GGA
Ser
>WENV180578828
OCMC01002707
50727
Bacteroidota
TGA
Ser
>WENV180578783
OCMC01001726
50727
Bacteroidota
TGA
Ser
>WENV180578619
OCMC01000237
50727
Bacteroidota
TGA
Ser
>WENV180578616
OCMC01000225
50727
Bacteroidota
TGA
Ser
>WENV180578593
OCMC01000190
50727
Bacteroidota
TGA
Ser
>WENV180579065
OCMC01027586
132360
Bacteroidota
GGG
Pro
>WENV180578742
OCMC01001094
132360
Bacteroidota
GGG
Pro
>WENV180578632
OCMC01000258
132360
Bacteroidota
GGG
Pro
>WENV180578554
OCMC01000121
132360
Bacteroidota
GGG
Pro
>WENV180579312
OCMC01137701
425638
Bacteroidota
CTG
Gln
>WENV180578431
OCMC01000006
425638
Bacteroidota
CTG
Gln
>WENV180578493
OCMC01000047
19317
Bacteroidota
GGA
Ser
>WENV180578530
OCMC01000082
353927
Bacteroidota
TTC
Glu
>WENV180579047
OCMC01024099
185921
Bacteroidota
GTC
Asp
>WENV180579131
OCMC01043014
23696
Bacteroidota
GCT
Ser
>WENV180579076
OCMC01028947
23696
Bacteroidota
GCT
Ser
>WENV180578435
OCMC01000009
414426
Bacteroidota
CTG
Gln
>WENV180578819
OCMC01002622
16224
Bacteroidota
GGA
Ser
>WENV180578773
OCMC01001605
16224
Bacteroidota
GGA
Ser
>WENV180578861
OCMC01003477
16220
Bacteroidota
GGA
Ser
>WENV180578854
OCMC01003468
338125
Bacteroidota
CCT
Arg
>WENV180578541
OCMC01000101
338125
Bacteroidota
CCT
Arg
>WENV180578712
OCMC01000845
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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