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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180594061
OCOY01023230
448301
Bacteroidota
>WENV180594062
OCOY01023512
171098
Bacteroidota
>WENV180593878
OCOY01001858
257182
Bacteroidota
>WENV180593879
OCOY01001858
257182
Bacteroidota
>WENV180593940
OCOY01004768
131028
Bacteroidota
CAA
Leu
>WENV180593975
OCOY01007724
448064
Bacteroidota
CCA
Trp
>WENV180594036
OCOY01017411
268445
Bacteroidota
GAA
Phe
>WENV180594174
OCOY01079018
162242
Bacteroidota
GAT
Ile
>WENV180594163
OCOY01072304
372822
Bacteroidota
GCC
Gly
>WENV180593931
OCOY01004486
257180
Bacteroidota
GCC
Gly
>WENV180594009
OCOY01010130
28458
Bacteroidota
GCT
Ser
>WENV180594136
OCOY01056830
65208
Bacteroidota
GCT
Ser
>WENV180594129
OCOY01051469
66584
Bacteroidota
GCT
Ser
>WENV180594123
OCOY01048940
165596
Bacteroidota
GGC
Ala
>WENV180593881
OCOY01001876
368969
Bacteroidota
GGT
Thr
>WENV180593880
OCOY01001876
124574
Bacteroidota
GTA
Tyr
>WENV180593884
OCOY01001965
105619
Bacteroidota
GTA
Tyr
>WENV180593850
OCOY01000617
160922
Bacteroidota
GTG
His
>WENV180594164
OCOY01072304
65241
Bacteroidota
TAA
Leu
>WENV180593932
OCOY01004486
41177
Bacteroidota
TAA
Leu
>WENV180593941
OCOY01004871
41177
Bacteroidota
TAA
Leu
>WENV180594018
OCOY01010868
149057
Bacteroidota
TAC
Val
>WENV180593839
OCOY01000433
105084
Bacteroidota
TAG
Leu
>WENV180594049
OCOY01020539
105706
Bacteroidota
TAG
Leu
>WENV180593953
OCOY01005929
160921
Bacteroidota
TCG
Arg
>WENV180594011
OCOY01010130
162241
Bacteroidota
TCT
Arg
>WENV180593852
OCOY01000665
188130
Bacteroidota
TCT
Arg
>WENV180593888
OCOY01002121
57026
Bacteroidota
TGA
Ser
>WENV180594130
OCOY01051469
144149
Bacteroidota
TGG
Pro
>WENV180593989
OCOY01008506
158533
Bacteroidota
TGT
Thr
>WENV180593990
OCOY01008506
158533
Bacteroidota
TGT
Thr
>WENV180593868
OCOY01001323
169172
Bacteroidota
TGT
Thr
>WENV180593902
OCOY01002573
370411
Bacteroidota
TTC
Glu
>WENV180593841
OCOY01000449
368967
Bacteroidota
TTC
Glu
>WENV180593947
OCOY01005284
368967
Bacteroidota
TTC
Glu
>WENV180594096
OCOY01036021
451422
Bacteroidota
TTG
Gln
>WENV180594056
OCOY01021968
448844
Bacteroidota
TTG
Gln
>WENV180594173
OCOY01078799
259007
Bacteroidota
TTT
Lys
>WENV180594093
OCOY01034750
257181
Bacteroidota
TTT
Lys
>WENV180594176
OCOY01085091
257181
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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