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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
70 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180599544
OCPP01001740
235146
Actinomycetota
CGT
Thr
>WENV180599540
OCPP01001739
235347
Actinomycetota
GGC
Ala
>WENV180599541
OCPP01001739
235347
Actinomycetota
GGC
Ala
>WENV180599271
OCPP01000374
144589
Actinomycetota
ACG
Arg
>WENV180599272
OCPP01000374
144589
Actinomycetota
ACG
Arg
>WENV180599748
OCPP01004397
37070
Actinomycetota
CGA
Ser
>WENV180599760
OCPP01004712
201717
Actinomycetota
CTT
Lys
>WENV180599673
OCPP01003264
235194
Actinomycetota
GTG
His
>WENV180599752
OCPP01004443
158720
Actinomycetota
ACG
Arg
>WENV180599751
OCPP01004443
158720
Actinomycetota
ACG
Arg
>WENV180600203
OCPP01053201
245301
Actinomycetota
GCC
Gly
>WENV180599661
OCPP01003038
411601
Actinomycetota
CCC
Gly
>WENV180599568
OCPP01002025
23370
Actinomycetota
GCT
Ser
>WENV180599320
OCPP01000540
174149
Actinomycetota
GAT
Ile
>WENV180599712
OCPP01003974
338239
Actinomycetota
TTC
Glu
>WENV180599321
OCPP01000540
235174
Actinomycetota
TGC
Ala
>WENV180599219
OCPP01000263
235174
Actinomycetota
TGC
Ala
>WENV180599112
OCPP01000088
235101
Actinomycetota
TTT
Lys
>WENV180599371
OCPP01000656
121510
Actinomycetota
TAA
Leu
>WENV180599724
OCPP01004025
356045
Actinomycetota
GAC
Val
>WENV180599949
OCPP01012485
153948
Actinomycetota
GGG
Pro
>WENV180599522
OCPP01001524
44855
Actinomycetota
TGA
Ser
>WENV180599725
OCPP01004025
235199
Actinomycetota
CAC
Val
>WENV180599554
OCPP01001815
44862
Actinomycetota
CGA
Ser
>WENV180599542
OCPP01001740
313386
Actinomycetota
CGT
Thr
>WENV180599136
OCPP01000114
198659
Actinomycetota
TAC
Val
>WENV180599709
OCPP01003903
254857
Actinomycetota
CCG
Arg
>WENV180599567
OCPP01002025
144700
Actinomycetota
CAT
Met
>WENV180599222
OCPP01000269
44942
Actinomycetota
TGA
Ser
>WENV180599865
OCPP01007602
144636
Actinomycetota
GAT
Ile
>WENV180599849
OCPP01007250
243671
Actinomycetota
CTC
Glu
>WENV180599146
OCPP01000138
98279
Actinomycetota
GTA
Tyr
>WENV180599850
OCPP01007250
338148
Actinomycetota
CTG
Gln
>WENV180599250
OCPP01000338
338148
Actinomycetota
CTG
Gln
>WENV180599758
OCPP01004575
235148
Actinomycetota
GTT
Asn
>WENV180599302
OCPP01000464
235148
Actinomycetota
GTT
Asn
>WENV180599260
OCPP01000354
235148
Actinomycetota
GTT
Asn
>WENV180599259
OCPP01000354
235148
Actinomycetota
GTT
Asn
>WENV180599874
OCPP01007962
53078
Actinomycetota
GGA
Ser
>WENV180599631
OCPP01002635
53078
Actinomycetota
GGA
Ser
>WENV180599799
OCPP01005640
176456
Actinomycetota
TCT
Arg
>WENV180599891
OCPP01008637
144825
Actinomycetota
CAT
Met
>WENV180599392
OCPP01000766
145347
Actinomycetota
CAA
Leu
>WENV180600191
OCPP01050070
119508
Actinomycetota
TAA
Leu
>WENV180599676
OCPP01003310
338139
Actinomycetota
GTT
Asn
>WENV180599675
OCPP01003310
338139
Actinomycetota
GTT
Asn
>WENV180599597
OCPP01002244
235348
Actinomycetota
CCT
Arg
>WENV180599397
OCPP01000778
16467
Actinomycetota
GCT
Ser
>WENV180599376
OCPP01000690
411554
Actinomycetota
CCC
Gly
>WENV180599543
OCPP01001740
113601
Actinomycetota
TAG
Leu
>WENV180599266
OCPP01000360
113601
Actinomycetota
TAG
Leu
>WENV180599575
OCPP01002070
144595
Actinomycetota
CAA
Leu
>WENV180599431
OCPP01000889
145343
Actinomycetota
GGG
Pro
>WENV180599476
OCPP01001231
235149
Actinomycetota
CCT
Arg
>WENV180599794
OCPP01005631
414234
Actinomycetota
CTG
Gln
>WENV180599730
OCPP01004147
145269
Actinomycetota
CAT
Met
>WENV180599265
OCPP01000360
235121
Actinomycetota
CGT
Thr
>WENV180599580
OCPP01002094
393408
Actinomycetota
TTC
Glu
>WENV180599707
OCPP01003837
144635
Actinomycetota
TGG
Pro
>WENV180599339
OCPP01000575
119485
Actinomycetota
TAA
Leu
>WENV180599626
OCPP01002541
80622
Actinomycetota
CAG
Leu
>WENV180599455
OCPP01001102
16222
Actinomycetota
GAG
Leu
>WENV180599340
OCPP01000577
158513
Actinomycetota
TGG
Pro
>WENV180600204
OCPP01053201
412834
Actinomycetota
GCA
Cys
>WENV180599301
OCPP01000464
235173
Actinomycetota
GGC
Ala
>WENV180599220
OCPP01000263
235173
Actinomycetota
GGC
Ala
>WENV180599757
OCPP01004575
243162
Actinomycetota
GTT
Asn
>WENV180599454
OCPP01001092
144660
Actinomycetota
TAC
Val
>WENV180599527
OCPP01001621
278447
Actinomycetota
GTG
His
>WENV180599557
OCPP01001930
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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