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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
117 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180611657
OCPX01000012
235097
Bacteroidota
TTT
Lys
>WENV180612090
OCPX01000466
235097
Bacteroidota
TTT
Lys
>WENV180612202
OCPX01000716
235097
Bacteroidota
TTT
Lys
>WENV180612639
OCPX01002783
235097
Bacteroidota
TTT
Lys
>WENV180612660
OCPX01003154
95987
Bacteroidota
CAA
Leu
>WENV180612479
OCPX01001663
339412
Bacteroidota
GGT
Thr
>WENV180613100
OCPX01016386
235102
Bacteroidota
CGT
Thr
>WENV180612212
OCPX01000727
267954
Bacteroidota
GCC
Gly
>WENV180612213
OCPX01000727
267954
Bacteroidota
GCC
Gly
>WENV180612214
OCPX01000727
267954
Bacteroidota
GCC
Gly
>WENV180612133
OCPX01000555
237796
Bacteroidota
CGT
Thr
>WENV180612850
OCPX01005593
144657
Bacteroidota
CGG
Pro
>WENV180613104
OCPX01017052
243025
Bacteroidota
CAT
Met
>WENV180612712
OCPX01003744
243025
Bacteroidota
CAT
Met
>WENV180612627
OCPX01002725
97336
Bacteroidota
CAG
Leu
>WENV180612720
OCPX01003907
338155
Bacteroidota
CTC
Glu
>WENV180612549
OCPX01002159
338155
Bacteroidota
CTC
Glu
>WENV180613295
OCPX01043153
339341
Bacteroidota
GGT
Thr
>WENV180613064
OCPX01013713
343138
Bacteroidota
CCT
Arg
>WENV180612283
OCPX01000901
58715
Bacteroidota
GAG
Leu
>WENV180612221
OCPX01000729
46165
Bacteroidota
TGA
Ser
>WENV180612572
OCPX01002352
338486
Bacteroidota
CAT
Met
>WENV180612543
OCPX01002093
338486
Bacteroidota
CAT
Met
>WENV180612189
OCPX01000681
413663
Bacteroidota
CTG
Gln
>WENV180612188
OCPX01000681
413663
Bacteroidota
CTG
Gln
>WENV180612485
OCPX01001697
415410
Bacteroidota
TTG
Gln
>WENV180611902
OCPX01000183
415410
Bacteroidota
TTG
Gln
>WENV180611783
OCPX01000069
415410
Bacteroidota
TTG
Gln
>WENV180612480
OCPX01001663
237797
Bacteroidota
CCA
Trp
>WENV180612502
OCPX01001760
59689
Bacteroidota
CAG
Leu
>WENV180612282
OCPX01000901
59689
Bacteroidota
CAG
Leu
>WENV180612254
OCPX01000828
412479
Bacteroidota
TTG
Gln
>WENV180613316
OCPX01047384
237247
Bacteroidota
TTT
Lys
>WENV180612229
OCPX01000742
147147
Bacteroidota
GTG
His
>WENV180612670
OCPX01003249
147147
Bacteroidota
GTG
His
>WENV180612669
OCPX01003249
147147
Bacteroidota
GTG
His
>WENV180612937
OCPX01008112
341950
Bacteroidota
>WENV180611781
OCPX01000065
338124
Bacteroidota
CCG
Arg
>WENV180612516
OCPX01001839
235203
Bacteroidota
TTT
Lys
>WENV180612219
OCPX01000729
238121
Bacteroidota
CTT
Lys
>WENV180612218
OCPX01000729
238121
Bacteroidota
CTT
Lys
>WENV180612583
OCPX01002450
126641
Bacteroidota
TAC
Val
>WENV180613237
OCPX01033689
338132
Bacteroidota
GCA
Cys
>WENV180612525
OCPX01001884
338132
Bacteroidota
GCA
Cys
>WENV180612452
OCPX01001517
338132
Bacteroidota
GCA
Cys
>WENV180612274
OCPX01000875
338132
Bacteroidota
GCA
Cys
>WENV180612220
OCPX01000729
45423
Bacteroidota
TGA
Ser
>WENV180612391
OCPX01001265
193809
Bacteroidota
CAT
Met
>WENV180611880
OCPX01000149
193809
Bacteroidota
CAT
Met
>WENV180613149
OCPX01021026
37076
Bacteroidota
TAA
Leu
>WENV180612523
OCPX01001875
58714
Bacteroidota
CAA
Leu
>WENV180613094
OCPX01015942
144933
Bacteroidota
TCT
Arg
>WENV180612355
OCPX01001111
251266
Bacteroidota
CTT
Lys
>WENV180612141
OCPX01000559
251266
Bacteroidota
CTT
Lys
>WENV180612440
OCPX01001443
144656
Bacteroidota
GTG
His
>WENV180612578
OCPX01002434
235207
Bacteroidota
CAT
Met
>WENV180612041
OCPX01000368
144659
Bacteroidota
GTG
His
>WENV180612851
OCPX01005593
235180
Bacteroidota
CCA
Trp
>WENV180613343
OCPX01055131
144596
Bacteroidota
GGC
Ala
>WENV180613441
OCPX01105538
80607
Bacteroidota
GTA
Tyr
>WENV180613294
OCPX01043153
80607
Bacteroidota
GTA
Tyr
>WENV180612713
OCPX01003812
80607
Bacteroidota
GTA
Tyr
>WENV180612000
OCPX01000299
80607
Bacteroidota
GTA
Tyr
>WENV180612167
OCPX01000605
113604
Bacteroidota
>WENV180612667
OCPX01003197
344769
Bacteroidota
CTC
Glu
>WENV180612666
OCPX01003197
344769
Bacteroidota
CTC
Glu
>WENV180612228
OCPX01000742
344769
Bacteroidota
CTC
Glu
>WENV180612227
OCPX01000742
344769
Bacteroidota
CTC
Glu
>WENV180612992
OCPX01009985
16999
Bacteroidota
GGA
Ser
>WENV180613349
OCPX01056495
80614
Bacteroidota
>WENV180612510
OCPX01001789
80614
Bacteroidota
>WENV180612046
OCPX01000373
415558
Bacteroidota
TTG
Gln
>WENV180613510
OCPX01164877
144590
Bacteroidota
GTT
Asn
>WENV180612296
OCPX01000935
144590
Bacteroidota
GTT
Asn
>WENV180611903
OCPX01000185
95559
Bacteroidota
TAG
Leu
>WENV180611658
OCPX01000012
419272
Bacteroidota
CTG
Gln
>WENV180611729
OCPX01000041
144655
Bacteroidota
GGC
Ala
>WENV180611892
OCPX01000162
263771
Bacteroidota
CTT
Lys
>WENV180613066
OCPX01013713
338164
Bacteroidota
TTC
Glu
>WENV180613065
OCPX01013713
338164
Bacteroidota
TTC
Glu
>WENV180611990
OCPX01000281
240012
Bacteroidota
CCC
Gly
>WENV180613084
OCPX01015029
280469
Bacteroidota
CGT
Thr
>WENV180612960
OCPX01008548
167013
Bacteroidota
TGG
Pro
>WENV180612959
OCPX01008548
167013
Bacteroidota
TGG
Pro
>WENV180612998
OCPX01010318
44852
Bacteroidota
TAA
Leu
>WENV180612503
OCPX01001761
44852
Bacteroidota
TAA
Leu
>WENV180611637
OCPX01000004
44852
Bacteroidota
TAA
Leu
>WENV180612645
OCPX01002896
147439
Bacteroidota
TCT
Arg
>WENV180613466
OCPX01133601
280513
Bacteroidota
TTT
Lys
>WENV180612185
OCPX01000673
411550
Bacteroidota
CTG
Gln
>WENV180612184
OCPX01000673
411550
Bacteroidota
CTG
Gln
>WENV180612198
OCPX01000707
338165
Bacteroidota
GGT
Thr
>WENV180612180
OCPX01000661
19528
Bacteroidota
GGA
Ser
>WENV180612284
OCPX01000902
50727
Bacteroidota
TGA
Ser
>WENV180612159
OCPX01000596
50727
Bacteroidota
TGA
Ser
>WENV180611967
OCPX01000245
50727
Bacteroidota
TGA
Ser
>WENV180613233
OCPX01032973
132360
Bacteroidota
GGG
Pro
>WENV180612559
OCPX01002257
132360
Bacteroidota
GGG
Pro
>WENV180612088
OCPX01000462
132360
Bacteroidota
GGG
Pro
>WENV180611656
OCPX01000012
132360
Bacteroidota
GGG
Pro
>WENV180612438
OCPX01001434
425638
Bacteroidota
CTG
Gln
>WENV180612912
OCPX01007233
425638
Bacteroidota
CTG
Gln
>WENV180611645
OCPX01000007
425638
Bacteroidota
CTG
Gln
>WENV180611758
OCPX01000048
353927
Bacteroidota
TTC
Glu
>WENV180611757
OCPX01000048
353927
Bacteroidota
TTC
Glu
>WENV180613155
OCPX01022172
353927
Bacteroidota
TTC
Glu
>WENV180612566
OCPX01002340
23696
Bacteroidota
GCT
Ser
>WENV180612548
OCPX01002159
23696
Bacteroidota
GCT
Ser
>WENV180612958
OCPX01008548
412236
Bacteroidota
CCC
Gly
>WENV180612649
OCPX01002966
16224
Bacteroidota
GGA
Ser
>WENV180612338
OCPX01001061
16224
Bacteroidota
GGA
Ser
>WENV180612596
OCPX01002522
151960
Bacteroidota
GGC
Ala
>WENV180611659
OCPX01000012
16220
Bacteroidota
GGA
Ser
>WENV180612761
OCPX01004305
338125
Bacteroidota
CCT
Arg
>WENV180612419
OCPX01001338
235129
Bacteroidota
GCC
Gly
>WENV180612417
OCPX01001338
235129
Bacteroidota
GCC
Gly
>WENV180612281
OCPX01000901
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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