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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
120 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180616197
OCQA01000032
235097
Bacteroidota
TTT
Lys
>WENV180616415
OCQA01000139
235097
Bacteroidota
TTT
Lys
>WENV180616730
OCQA01000754
235097
Bacteroidota
TTT
Lys
>WENV180616931
OCQA01001539
235097
Bacteroidota
TTT
Lys
>WENV180617125
OCQA01003584
235097
Bacteroidota
TTT
Lys
>WENV180617563
OCQA01020006
235097
Bacteroidota
TTT
Lys
>WENV180618124
OCQA01235267
235097
Bacteroidota
TTT
Lys
>WENV180616932
OCQA01001562
95987
Bacteroidota
CAA
Leu
>WENV180616891
OCQA01001293
339412
Bacteroidota
GGT
Thr
>WENV180616504
OCQA01000239
235102
Bacteroidota
CGT
Thr
>WENV180617218
OCQA01004815
235102
Bacteroidota
CGT
Thr
>WENV180617633
OCQA01027469
144657
Bacteroidota
CGG
Pro
>WENV180616608
OCQA01000452
243025
Bacteroidota
CAT
Met
>WENV180616944
OCQA01001649
243025
Bacteroidota
CAT
Met
>WENV180616958
OCQA01001729
243025
Bacteroidota
CAT
Met
>WENV180616799
OCQA01000905
338155
Bacteroidota
CTC
Glu
>WENV180617373
OCQA01009561
343138
Bacteroidota
CCT
Arg
>WENV180618099
OCQA01226697
58715
Bacteroidota
GAG
Leu
>WENV180617572
OCQA01021057
46165
Bacteroidota
TGA
Ser
>WENV180617544
OCQA01018376
338486
Bacteroidota
CAT
Met
>WENV180617340
OCQA01008072
415410
Bacteroidota
TTG
Gln
>WENV180617011
OCQA01002108
415410
Bacteroidota
TTG
Gln
>WENV180616728
OCQA01000743
415410
Bacteroidota
TTG
Gln
>WENV180616150
OCQA01000011
415410
Bacteroidota
TTG
Gln
>WENV180617789
OCQA01051278
136244
Bacteroidota
TAC
Val
>WENV180616808
OCQA01000954
136244
Bacteroidota
TAC
Val
>WENV180616538
OCQA01000301
411543
Bacteroidota
CTG
Gln
>WENV180617560
OCQA01019643
59689
Bacteroidota
CAG
Leu
>WENV180617492
OCQA01015068
20893
Bacteroidota
GGA
Ser
>WENV180616436
OCQA01000162
144695
Bacteroidota
CAT
Met
>WENV180616677
OCQA01000596
155123
Bacteroidota
GTT
Asn
>WENV180616914
OCQA01001410
344692
Bacteroidota
GGT
Thr
>WENV180616221
OCQA01000039
145504
Bacteroidota
TGT
Thr
>WENV180617050
OCQA01002511
338124
Bacteroidota
CCG
Arg
>WENV180617781
OCQA01049354
235203
Bacteroidota
TTT
Lys
>WENV180616177
OCQA01000026
235203
Bacteroidota
TTT
Lys
>WENV180617138
OCQA01003860
126641
Bacteroidota
TAC
Val
>WENV180617453
OCQA01012902
338132
Bacteroidota
GCA
Cys
>WENV180617004
OCQA01002062
338132
Bacteroidota
GCA
Cys
>WENV180616884
OCQA01001245
338132
Bacteroidota
GCA
Cys
>WENV180616796
OCQA01000902
338132
Bacteroidota
GCA
Cys
>WENV180616857
OCQA01001124
37076
Bacteroidota
TAA
Leu
>WENV180617202
OCQA01004644
58714
Bacteroidota
CAA
Leu
>WENV180617446
OCQA01012590
235165
Bacteroidota
CCA
Trp
>WENV180616710
OCQA01000671
235165
Bacteroidota
CCA
Trp
>WENV180617306
OCQA01006967
301449
Bacteroidota
CGG
Pro
>WENV180616826
OCQA01001005
301449
Bacteroidota
CGG
Pro
>WENV180616773
OCQA01000845
301449
Bacteroidota
CGG
Pro
>WENV180616439
OCQA01000163
301449
Bacteroidota
CGG
Pro
>WENV180616203
OCQA01000034
301449
Bacteroidota
CGG
Pro
>WENV180616957
OCQA01001722
144933
Bacteroidota
TCT
Arg
>WENV180616656
OCQA01000536
303954
Bacteroidota
GCC
Gly
>WENV180617104
OCQA01003064
144656
Bacteroidota
GTG
His
>WENV180617397
OCQA01010935
235207
Bacteroidota
CAT
Met
>WENV180616962
OCQA01001762
235207
Bacteroidota
CAT
Met
>WENV180616334
OCQA01000087
235207
Bacteroidota
CAT
Met
>WENV180617498
OCQA01015290
235180
Bacteroidota
CCA
Trp
>WENV180616881
OCQA01001213
144596
Bacteroidota
GGC
Ala
>WENV180618113
OCQA01233820
80607
Bacteroidota
GTA
Tyr
>WENV180617148
OCQA01003958
80607
Bacteroidota
GTA
Tyr
>WENV180616869
OCQA01001154
80607
Bacteroidota
GTA
Tyr
>WENV180617303
OCQA01006892
113604
Bacteroidota
>WENV180616660
OCQA01000542
344769
Bacteroidota
CTC
Glu
>WENV180616659
OCQA01000542
344769
Bacteroidota
CTC
Glu
>WENV180617333
OCQA01007932
52358
Bacteroidota
TGA
Ser
>WENV180617143
OCQA01003901
52358
Bacteroidota
TGA
Ser
>WENV180616526
OCQA01000285
52358
Bacteroidota
TGA
Ser
>WENV180616353
OCQA01000098
52358
Bacteroidota
TGA
Ser
>WENV180617001
OCQA01002014
154643
Bacteroidota
CAT
Met
>WENV180616872
OCQA01001165
154643
Bacteroidota
CAT
Met
>WENV180617239
OCQA01005370
415558
Bacteroidota
TTG
Gln
>WENV180618135
OCQA01237441
144590
Bacteroidota
GTT
Asn
>WENV180618133
OCQA01237379
144590
Bacteroidota
GTT
Asn
>WENV180616260
OCQA01000044
144590
Bacteroidota
GTT
Asn
>WENV180616259
OCQA01000044
144590
Bacteroidota
GTT
Asn
>WENV180616933
OCQA01001580
95559
Bacteroidota
TAG
Leu
>WENV180617173
OCQA01004290
419272
Bacteroidota
CTG
Gln
>WENV180617178
OCQA01004416
144655
Bacteroidota
GGC
Ala
>WENV180617093
OCQA01003003
144655
Bacteroidota
GGC
Ala
>WENV180616220
OCQA01000039
144639
Bacteroidota
GGC
Ala
>WENV180617790
OCQA01051363
338164
Bacteroidota
TTC
Glu
>WENV180617937
OCQA01095234
95875
Bacteroidota
TAG
Leu
>WENV180617587
OCQA01022092
240012
Bacteroidota
CCC
Gly
>WENV180617437
OCQA01012445
44852
Bacteroidota
TAA
Leu
>WENV180616975
OCQA01001884
44852
Bacteroidota
TAA
Leu
>WENV180616524
OCQA01000275
44852
Bacteroidota
TAA
Leu
>WENV180616206
OCQA01000034
44852
Bacteroidota
TAA
Leu
>WENV180617782
OCQA01049509
147439
Bacteroidota
TCT
Arg
>WENV180617452
OCQA01012845
280513
Bacteroidota
TTT
Lys
>WENV180616173
OCQA01000025
150485
Bacteroidota
GTT
Asn
>WENV180616172
OCQA01000025
150485
Bacteroidota
GTT
Asn
>WENV180617434
OCQA01012373
411550
Bacteroidota
CTG
Gln
>WENV180616618
OCQA01000470
19528
Bacteroidota
GGA
Ser
>WENV180616262
OCQA01000045
50727
Bacteroidota
TGA
Ser
>WENV180617817
OCQA01056236
132360
Bacteroidota
GGG
Pro
>WENV180617559
OCQA01019635
132360
Bacteroidota
GGG
Pro
>WENV180617129
OCQA01003636
132360
Bacteroidota
GGG
Pro
>WENV180617085
OCQA01002922
132360
Bacteroidota
GGG
Pro
>WENV180616865
OCQA01001145
132360
Bacteroidota
GGG
Pro
>WENV180616565
OCQA01000364
132360
Bacteroidota
GGG
Pro
>WENV180616382
OCQA01000118
132360
Bacteroidota
GGG
Pro
>WENV180616691
OCQA01000630
425638
Bacteroidota
CTG
Gln
>WENV180617505
OCQA01015977
239647
Bacteroidota
TTT
Lys
>WENV180617384
OCQA01010299
353927
Bacteroidota
TTC
Glu
>WENV180616430
OCQA01000160
353927
Bacteroidota
TTC
Glu
>WENV180616429
OCQA01000160
353927
Bacteroidota
TTC
Glu
>WENV180616812
OCQA01000956
146762
Bacteroidota
TGG
Pro
>WENV180616798
OCQA01000905
23696
Bacteroidota
GCT
Ser
>WENV180617009
OCQA01002086
414426
Bacteroidota
CTG
Gln
>WENV180616900
OCQA01001358
414426
Bacteroidota
CTG
Gln
>WENV180616904
OCQA01001369
146764
Bacteroidota
GTC
Asp
>WENV180616903
OCQA01001369
146764
Bacteroidota
GTC
Asp
>WENV180617368
OCQA01009289
59498
Bacteroidota
GAG
Leu
>WENV180616527
OCQA01000291
16224
Bacteroidota
GGA
Ser
>WENV180617105
OCQA01003075
151960
Bacteroidota
GGC
Ala
>WENV180617556
OCQA01019094
16220
Bacteroidota
GGA
Ser
>WENV180616731
OCQA01000759
338125
Bacteroidota
CCT
Arg
>WENV180616333
OCQA01000086
338125
Bacteroidota
CCT
Arg
>WENV180616265
OCQA01000047
338125
Bacteroidota
CCT
Arg
>WENV180617940
OCQA01096091
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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