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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
77 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180714294
ODFW01000009
235097
Bacteroidota
TTT
Lys
>WENV180714301
ODFW01000015
235097
Bacteroidota
TTT
Lys
>WENV180714317
ODFW01000026
235097
Bacteroidota
TTT
Lys
>WENV180714373
ODFW01000064
235097
Bacteroidota
TTT
Lys
>WENV180714427
ODFW01000106
235102
Bacteroidota
CGT
Thr
>WENV180715619
ODFW01019770
144657
Bacteroidota
CGG
Pro
>WENV180714571
ODFW01000277
243025
Bacteroidota
CAT
Met
>WENV180714931
ODFW01001359
243025
Bacteroidota
CAT
Met
>WENV180715733
ODFW01037264
243025
Bacteroidota
CAT
Met
>WENV180715862
ODFW01061080
338155
Bacteroidota
CTC
Glu
>WENV180715672
ODFW01027033
153993
Bacteroidota
GAT
Ile
>WENV180714540
ODFW01000229
343138
Bacteroidota
CCT
Arg
>WENV180715414
ODFW01007660
58715
Bacteroidota
GAG
Leu
>WENV180714858
ODFW01001079
17323
Bacteroidota
GGA
Ser
>WENV180715794
ODFW01048240
338486
Bacteroidota
CAT
Met
>WENV180715735
ODFW01037887
338486
Bacteroidota
CAT
Met
>WENV180714338
ODFW01000034
415410
Bacteroidota
TTG
Gln
>WENV180714308
ODFW01000022
415410
Bacteroidota
TTG
Gln
>WENV180714335
ODFW01000031
411543
Bacteroidota
CTG
Gln
>WENV180715791
ODFW01047714
188343
Bacteroidota
TGC
Ala
>WENV180715148
ODFW01002738
237247
Bacteroidota
TTT
Lys
>WENV180714689
ODFW01000518
344692
Bacteroidota
GGT
Thr
>WENV180714781
ODFW01000767
145504
Bacteroidota
TGT
Thr
>WENV180715185
ODFW01002984
341950
Bacteroidota
>WENV180715000
ODFW01001798
341950
Bacteroidota
>WENV180714304
ODFW01000020
338124
Bacteroidota
CCG
Arg
>WENV180716094
ODFW01219444
238121
Bacteroidota
CTT
Lys
>WENV180715527
ODFW01012226
338132
Bacteroidota
GCA
Cys
>WENV180714408
ODFW01000082
338132
Bacteroidota
GCA
Cys
>WENV180714291
ODFW01000008
338132
Bacteroidota
GCA
Cys
>WENV180714384
ODFW01000069
235165
Bacteroidota
CCA
Trp
>WENV180715485
ODFW01010327
144933
Bacteroidota
TCT
Arg
>WENV180714433
ODFW01000115
144656
Bacteroidota
GTG
His
>WENV180714295
ODFW01000009
235207
Bacteroidota
CAT
Met
>WENV180714279
ODFW01000004
235207
Bacteroidota
CAT
Met
>WENV180715011
ODFW01001877
80607
Bacteroidota
GTA
Tyr
>WENV180714315
ODFW01000026
80607
Bacteroidota
GTA
Tyr
>WENV180715642
ODFW01023509
16999
Bacteroidota
GGA
Ser
>WENV180715462
ODFW01009333
80614
Bacteroidota
>WENV180715416
ODFW01007792
80614
Bacteroidota
>WENV180714639
ODFW01000384
154643
Bacteroidota
CAT
Met
>WENV180715012
ODFW01001877
144590
Bacteroidota
GTT
Asn
>WENV180714281
ODFW01000005
144590
Bacteroidota
GTT
Asn
>WENV180714818
ODFW01000893
95559
Bacteroidota
TAG
Leu
>WENV180714448
ODFW01000130
419272
Bacteroidota
CTG
Gln
>WENV180714903
ODFW01001192
144655
Bacteroidota
GGC
Ala
>WENV180714482
ODFW01000165
144639
Bacteroidota
GGC
Ala
>WENV180715433
ODFW01008295
95875
Bacteroidota
TAG
Leu
>WENV180715270
ODFW01004313
240012
Bacteroidota
CCC
Gly
>WENV180714285
ODFW01000005
44852
Bacteroidota
TAA
Leu
>WENV180715671
ODFW01026926
280513
Bacteroidota
TTT
Lys
>WENV180714361
ODFW01000052
150485
Bacteroidota
GTT
Asn
>WENV180714360
ODFW01000052
150485
Bacteroidota
GTT
Asn
>WENV180715133
ODFW01002580
50727
Bacteroidota
TGA
Ser
>WENV180714541
ODFW01000230
50727
Bacteroidota
TGA
Ser
>WENV180715411
ODFW01007648
132360
Bacteroidota
GGG
Pro
>WENV180714901
ODFW01001180
132360
Bacteroidota
GGG
Pro
>WENV180714450
ODFW01000130
132360
Bacteroidota
GGG
Pro
>WENV180715711
ODFW01033061
425638
Bacteroidota
CTG
Gln
>WENV180715561
ODFW01014766
425638
Bacteroidota
CTG
Gln
>WENV180714805
ODFW01000850
425638
Bacteroidota
CTG
Gln
>WENV180714829
ODFW01000921
353927
Bacteroidota
TTC
Glu
>WENV180714784
ODFW01000771
353927
Bacteroidota
TTC
Glu
>WENV180715692
ODFW01030593
185921
Bacteroidota
GTC
Asp
>WENV180715417
ODFW01007792
185921
Bacteroidota
GTC
Asp
>WENV180715861
ODFW01061080
23696
Bacteroidota
GCT
Ser
>WENV180714904
ODFW01001194
414426
Bacteroidota
CTG
Gln
>WENV180714556
ODFW01000259
414426
Bacteroidota
CTG
Gln
>WENV180715701
ODFW01031744
48914
Bacteroidota
TGA
Ser
>WENV180714799
ODFW01000815
16224
Bacteroidota
GGA
Ser
>WENV180714300
ODFW01000014
16224
Bacteroidota
GGA
Ser
>WENV180715006
ODFW01001859
151960
Bacteroidota
GGC
Ala
>WENV180714449
ODFW01000130
16220
Bacteroidota
GGA
Ser
>WENV180714694
ODFW01000531
338125
Bacteroidota
CCT
Arg
>WENV180715412
ODFW01007660
235129
Bacteroidota
GCC
Gly
>WENV180715403
ODFW01007415
235129
Bacteroidota
GCC
Gly
>WENV180715936
ODFW01089862
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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