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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180781951
ODIP01009578
81880
Gammaproteobacteria
GAG
Leu
>WENV180782092
ODIP01019845
401437
Gammaproteobacteria
TTG
Gln
>WENV180782093
ODIP01019845
401437
Gammaproteobacteria
TTG
Gln
>WENV180781524
ODIP01000485
30640
Gammaproteobacteria
GGA
Ser
>WENV180781476
ODIP01000222
103428
Gammaproteobacteria
TAG
Leu
>WENV180781789
ODIP01003901
3276
Gammaproteobacteria
>WENV180782055
ODIP01016840
3276
Gammaproteobacteria
>WENV180782235
ODIP01043057
108171
Gammaproteobacteria
GTA
Tyr
>WENV180781421
ODIP01000014
145168
Gammaproteobacteria
CAT
Met
>WENV180781407
ODIP01000003
112351
Gammaproteobacteria
GTA
Tyr
>WENV180781478
ODIP01000222
397091
Gammaproteobacteria
TTG
Gln
>WENV180781477
ODIP01000222
397091
Gammaproteobacteria
TTG
Gln
>WENV180782340
ODIP01098416
339913
Gammaproteobacteria
TTT
Lys
>WENV180781408
ODIP01000003
358575
Gammaproteobacteria
TCC
Gly
>WENV180781543
ODIP01000601
58828
Gammaproteobacteria
TAA
Leu
>WENV180781470
ODIP01000173
147498
Gammaproteobacteria
GAC
Val
>WENV180781458
ODIP01000120
268904
Gammaproteobacteria
GTG
His
>WENV180781590
ODIP01001020
90409
Gammaproteobacteria
CAA
Leu
>WENV180781534
ODIP01000578
147499
Gammaproteobacteria
CTT
Lys
>WENV180781410
ODIP01000003
4379
Gammaproteobacteria
>WENV180781442
ODIP01000053
24813
Gammaproteobacteria
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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