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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
52 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180852223
ODKW01000127
243647
Bacillota
TTT
Lys
>WENV180852134
ODKW01000024
16842
Bacillota
CGA
Ser
>WENV180852601
ODKW01002387
37213
Bacillota
TGA
Ser
>WENV180852139
ODKW01000025
235693
Bacillota
GGT
Thr
>WENV180853500
ODKW01147125
338152
Bacillota
TTC
Glu
>WENV180852179
ODKW01000045
411591
Bacillota
GGT
Thr
>WENV180853425
ODKW01109025
162003
Bacillota
GTC
Asp
>WENV180853150
ODKW01033916
235150
Bacillota
TGC
Ala
>WENV180853412
ODKW01102978
114359
Bacillota
TAG
Leu
>WENV180853374
ODKW01084928
235137
Bacillota
TGC
Ala
>WENV180853368
ODKW01080699
235137
Bacillota
TGC
Ala
>WENV180853257
ODKW01052026
353391
Bacillota
GCC
Gly
>WENV180852110
ODKW01000019
16834
Bacillota
GCT
Ser
>WENV180853126
ODKW01031561
162647
Bacillota
CAT
Met
>WENV180853557
ODKW01186493
347453
Bacillota
TGT
Thr
>WENV180853426
ODKW01109025
347453
Bacillota
TGT
Thr
>WENV180852097
ODKW01000013
114002
Bacillota
CAA
Leu
>WENV180852095
ODKW01000010
37437
Bacillota
TAA
Leu
>WENV180853275
ODKW01054968
144763
Bacillota
TGG
Pro
>WENV180853163
ODKW01035097
162028
Bacillota
ACG
Arg
>WENV180852676
ODKW01003394
113951
Bacillota
GTA
Tyr
>WENV180852229
ODKW01000127
243612
Bacillota
TAC
Val
>WENV180852225
ODKW01000127
243612
Bacillota
TAC
Val
>WENV180852143
ODKW01000025
243612
Bacillota
TAC
Val
>WENV180853382
ODKW01088142
338439
Bacillota
GCC
Gly
>WENV180852940
ODKW01013051
338439
Bacillota
GCC
Gly
>WENV180852833
ODKW01007522
155089
Bacillota
CAT
Met
>WENV180853142
ODKW01032928
411585
Bacillota
GCA
Cys
>WENV180853003
ODKW01017006
147135
Bacillota
ACG
Arg
>WENV180852674
ODKW01003394
242848
Bacillota
GAA
Phe
>WENV180852182
ODKW01000054
342895
Bacillota
CAT
Met
>WENV180852710
ODKW01003979
10680
Bacillota
GGA
Ser
>WENV180853122
ODKW01031512
241471
Bacillota
TGC
Ala
>WENV180852129
ODKW01000024
250349
Bacillota
GAA
Phe
>WENV180852092
ODKW01000010
250349
Bacillota
GAA
Phe
>WENV180852669
ODKW01003394
148057
Bacillota
CAT
Met
>WENV180853053
ODKW01023339
237846
Bacillota
GCC
Gly
>WENV180852128
ODKW01000024
235197
Bacillota
GTC
Asp
>WENV180852091
ODKW01000010
235197
Bacillota
GTC
Asp
>WENV180853230
ODKW01046519
355179
Bacillota
TTG
Gln
>WENV180853340
ODKW01074150
147183
Bacillota
GTT
Asn
>WENV180852496
ODKW01001478
147183
Bacillota
GTT
Asn
>WENV180852420
ODKW01000918
243613
Bacillota
GTG
His
>WENV180852993
ODKW01016095
144672
Bacillota
TCT
Arg
>WENV180853159
ODKW01035097
256920
Bacillota
TTT
Lys
>WENV180853527
ODKW01164087
235292
Bacillota
CCA
Trp
>WENV180852140
ODKW01000025
152491
Bacillota
CAT
Met
>WENV180852922
ODKW01012101
242686
Bacillota
TGC
Ala
>WENV180852144
ODKW01000026
413657
Bacillota
CCC
Gly
>WENV180853004
ODKW01017066
238945
Bacillota
GCC
Gly
>WENV180852421
ODKW01000918
343027
Bacillota
TTG
Gln
>WENV180852678
ODKW01003407
151836
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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