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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
85 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180871859
ODLO01000067
24650
Bacillota
TAA
Leu
>WENV180872235
ODLO01002635
24650
Bacillota
TAA
Leu
>WENV180872242
ODLO01002689
24650
Bacillota
TAA
Leu
>WENV180872488
ODLO01036104
196621
Bacillota
GTC
Asp
>WENV180872486
ODLO01036091
144612
Bacillota
TCT
Arg
>WENV180872154
ODLO01001291
267649
Bacillota
TAC
Val
>WENV180872238
ODLO01002668
267649
Bacillota
TAC
Val
>WENV180872328
ODLO01009982
267649
Bacillota
TAC
Val
>WENV180872301
ODLO01006401
235098
Bacillota
GAC
Val
>WENV180872108
ODLO01000982
338152
Bacillota
TTC
Glu
>WENV180872296
ODLO01006314
338152
Bacillota
TTC
Glu
>WENV180872521
ODLO01049583
338152
Bacillota
TTC
Glu
>WENV180872088
ODLO01000910
148239
Bacillota
TCT
Arg
>WENV180872264
ODLO01003451
44854
Bacillota
TGA
Ser
>WENV180872471
ODLO01032157
37071
Bacillota
TGA
Ser
>WENV180872015
ODLO01000480
37071
Bacillota
TGA
Ser
>WENV180872385
ODLO01015190
246023
Bacillota
TGC
Ala
>WENV180871937
ODLO01000205
59312
Bacillota
CAG
Leu
>WENV180872056
ODLO01000695
338147
Bacillota
CTC
Glu
>WENV180872051
ODLO01000664
338147
Bacillota
CTC
Glu
>WENV180871864
ODLO01000076
338147
Bacillota
CTC
Glu
>WENV180872516
ODLO01046637
235150
Bacillota
TGC
Ala
>WENV180872405
ODLO01017224
235150
Bacillota
TGC
Ala
>WENV180872339
ODLO01011116
235150
Bacillota
TGC
Ala
>WENV180872342
ODLO01011534
235137
Bacillota
TGC
Ala
>WENV180872256
ODLO01003318
235114
Bacillota
TTT
Lys
>WENV180871811
ODLO01000016
235114
Bacillota
TTT
Lys
>WENV180872609
ODLO01090424
144668
Bacillota
GTC
Asp
>WENV180872428
ODLO01020533
144668
Bacillota
GTC
Asp
>WENV180872327
ODLO01009982
144668
Bacillota
GTC
Asp
>WENV180871927
ODLO01000192
144668
Bacillota
GTC
Asp
>WENV180872467
ODLO01031781
429429
Bacillota
CCA
Trp
>WENV180872287
ODLO01005126
429429
Bacillota
CCA
Trp
>WENV180872262
ODLO01003329
429429
Bacillota
CCA
Trp
>WENV180872210
ODLO01001833
429429
Bacillota
CCA
Trp
>WENV180871936
ODLO01000205
44859
Bacillota
AAG
Leu
>WENV180872361
ODLO01012722
11034
Bacillota
GGA
Ser
>WENV180872089
ODLO01000910
156937
Bacillota
GTG
His
>WENV180872592
ODLO01087285
235079
Bacillota
GAA
Phe
>WENV180872366
ODLO01013331
338149
Bacillota
CTC
Glu
>WENV180872009
ODLO01000431
37269
Bacillota
TGA
Ser
>WENV180872560
ODLO01071686
287000
Bacillota
GTT
Asn
>WENV180872249
ODLO01002913
287000
Bacillota
GTT
Asn
>WENV180871980
ODLO01000339
287000
Bacillota
GTT
Asn
>WENV180872433
ODLO01020645
169968
Bacillota
CAT
Met
>WENV180872372
ODLO01013637
169968
Bacillota
CAT
Met
>WENV180872331
ODLO01009982
169968
Bacillota
CAT
Met
>WENV180872320
ODLO01009151
169968
Bacillota
CAT
Met
>WENV180872568
ODLO01076870
162445
Bacillota
CAT
Met
>WENV180872402
ODLO01017018
162445
Bacillota
CAT
Met
>WENV180872384
ODLO01015190
201704
Bacillota
GAT
Ile
>WENV180872387
ODLO01015449
152492
Bacillota
GGG
Pro
>WENV180872002
ODLO01000396
144610
Bacillota
GTG
His
>WENV180872338
ODLO01011074
411547
Bacillota
CTG
Gln
>WENV180872215
ODLO01001925
147684
Bacillota
ACG
Arg
>WENV180872214
ODLO01001925
147684
Bacillota
ACG
Arg
>WENV180872265
ODLO01003451
4624
Bacillota
GCT
Ser
>WENV180872233
ODLO01002566
18852
Bacillota
GCT
Ser
>WENV180872025
ODLO01000508
18852
Bacillota
GCT
Ser
>WENV180872414
ODLO01018780
235095
Bacillota
GGT
Thr
>WENV180872375
ODLO01014061
344183
Bacillota
CTG
Gln
>WENV180871878
ODLO01000101
235142
Bacillota
CTT
Lys
>WENV180871851
ODLO01000056
235142
Bacillota
CTT
Lys
>WENV180872340
ODLO01011169
80612
Bacillota
GTA
Tyr
>WENV180872435
ODLO01020645
235127
Bacillota
TTT
Lys
>WENV180872333
ODLO01009982
235127
Bacillota
TTT
Lys
>WENV180872322
ODLO01009151
235127
Bacillota
TTT
Lys
>WENV180872150
ODLO01001259
235127
Bacillota
TTT
Lys
>WENV180872048
ODLO01000630
235127
Bacillota
TTT
Lys
>WENV180871933
ODLO01000192
235127
Bacillota
TTT
Lys
>WENV180872147
ODLO01001259
147674
Bacillota
TCT
Arg
>WENV180872464
ODLO01030479
235124
Bacillota
TGG
Pro
>WENV180872288
ODLO01005253
338129
Bacillota
TGT
Thr
>WENV180872352
ODLO01012394
144652
Bacillota
GTC
Asp
>WENV180872367
ODLO01013331
144621
Bacillota
GTT
Asn
>WENV180872357
ODLO01012394
235113
Bacillota
GAA
Phe
>WENV180871909
ODLO01000169
235113
Bacillota
GAA
Phe
>WENV180872303
ODLO01006602
58712
Bacillota
CAG
Leu
>WENV180872317
ODLO01009044
272992
Bacillota
CTT
Lys
>WENV180872424
ODLO01019799
144594
Bacillota
CAC
Val
>WENV180872355
ODLO01012394
95563
Bacillota
GTA
Tyr
>WENV180871863
ODLO01000076
95563
Bacillota
GTA
Tyr
>WENV180872373
ODLO01013637
272488
Bacillota
GAA
Phe
>WENV180872522
ODLO01051281
338131
Bacillota
GCC
Gly
>WENV180872309
ODLO01007924
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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