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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181108751
OEEJ01000240
243647
Bacillota
TTT
Lys
>WENV181108714
OEEJ01000198
178679
Bacillota
CAT
Met
>WENV181108904
OEEJ01001074
16842
Bacillota
CGA
Ser
>WENV181108591
OEEJ01000088
267649
Bacillota
TAC
Val
>WENV181108901
OEEJ01001016
267649
Bacillota
TAC
Val
>WENV181109197
OEEJ01013963
118788
Bacillota
TAG
Leu
>WENV181109192
OEEJ01013963
359540
Bacillota
GTT
Asn
>WENV181108708
OEEJ01000198
389888
Bacillota
GCC
Gly
>WENV181109343
OEEJ01027892
308424
Bacillota
TTT
Lys
>WENV181108706
OEEJ01000198
308424
Bacillota
TTT
Lys
>WENV181108776
OEEJ01000329
391536
Bacillota
TTC
Glu
>WENV181109074
OEEJ01005749
16834
Bacillota
GCT
Ser
>WENV181108887
OEEJ01000924
114002
Bacillota
CAA
Leu
>WENV181109195
OEEJ01013963
392638
Bacillota
TGT
Thr
>WENV181108710
OEEJ01000198
162028
Bacillota
ACG
Arg
>WENV181109341
OEEJ01027892
113951
Bacillota
GTA
Tyr
>WENV181108720
OEEJ01000198
113951
Bacillota
GTA
Tyr
>WENV181108777
OEEJ01000329
243612
Bacillota
TAC
Val
>WENV181109396
OEEJ01041335
144766
Bacillota
CAT
Met
>WENV181109301
OEEJ01022074
155089
Bacillota
CAT
Met
>WENV181109163
OEEJ01011393
147135
Bacillota
ACG
Arg
>WENV181108802
OEEJ01000378
242848
Bacillota
GAA
Phe
>WENV181108718
OEEJ01000198
242848
Bacillota
GAA
Phe
>WENV181109126
OEEJ01007982
194150
Bacillota
TGG
Pro
>WENV181109245
OEEJ01017235
185292
Bacillota
ACG
Arg
>WENV181109517
OEEJ01101589
154711
Bacillota
TGG
Pro
>WENV181109034
OEEJ01003895
237846
Bacillota
GCC
Gly
>WENV181109535
OEEJ01113824
235197
Bacillota
GTC
Asp
>WENV181108974
OEEJ01002248
235197
Bacillota
GTC
Asp
>WENV181109531
OEEJ01110490
368876
Bacillota
GCC
Gly
>WENV181108976
OEEJ01002248
368876
Bacillota
GCC
Gly
>WENV181109193
OEEJ01013963
388132
Bacillota
TTC
Glu
>WENV181109194
OEEJ01013963
235288
Bacillota
TAC
Val
>WENV181109398
OEEJ01041335
163753
Bacillota
TGG
Pro
>WENV181109466
OEEJ01071379
157838
Bacillota
GTC
Asp
>WENV181108749
OEEJ01000240
243613
Bacillota
GTG
His
>WENV181109196
OEEJ01013963
108675
Bacillota
GTA
Tyr
>WENV181109178
OEEJ01012266
144672
Bacillota
TCT
Arg
>WENV181109320
OEEJ01024193
152491
Bacillota
CAT
Met
>WENV181108774
OEEJ01000329
273029
Bacillota
TGT
Thr
>WENV181109319
OEEJ01024193
281472
Bacillota
GGT
Thr
>WENV181109128
OEEJ01007982
178024
Bacillota
TCT
Arg
>WENV181109221
OEEJ01015484
315448
Bacillota
GGT
Thr
>WENV181108769
OEEJ01000303
413657
Bacillota
CCC
Gly
>WENV181108746
OEEJ01000234
272488
Bacillota
GAA
Phe
>WENV181109538
OEEJ01116731
287034
Bacillota
GTT
Asn
>WENV181108775
OEEJ01000329
287034
Bacillota
GTT
Asn
>WENV181108750
OEEJ01000240
343027
Bacillota
TTG
Gln
>WENV181108821
OEEJ01000459
151836
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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