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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181212307
OFBO01000232
37831
Actinomycetota
GGA
Ser
>WENV181212280
OFBO01000055
235605
Actinomycetota
CGT
Thr
>WENV181212271
OFBO01000012
96217
Actinomycetota
TAG
Leu
>WENV181212269
OFBO01000005
145084
Actinomycetota
GGG
Pro
>WENV181212282
OFBO01000061
235606
Actinomycetota
GGT
Thr
>WENV181212316
OFBO01000285
3286
Actinomycetota
>WENV181212332
OFBO01001048
37092
Actinomycetota
GGA
Ser
>WENV181212334
OFBO01001318
95656
Actinomycetota
TAG
Leu
>WENV181212292
OFBO01000113
235663
Actinomycetota
TTT
Lys
>WENV181212298
OFBO01000129
241627
Actinomycetota
>WENV181212283
OFBO01000061
338474
Actinomycetota
CAT
Met
>WENV181212285
OFBO01000064
147913
Actinomycetota
TCT
Arg
>WENV181212293
OFBO01000113
235574
Actinomycetota
TTC
Glu
>WENV181212286
OFBO01000083
145065
Actinomycetota
GAT
Ile
>WENV181212319
OFBO01000330
95655
Actinomycetota
GTA
Tyr
>WENV181212321
OFBO01000389
16526
Actinomycetota
CGA
Ser
>WENV181212318
OFBO01000313
176229
Actinomycetota
CAA
Leu
>WENV181212337
OFBO01001739
37093
Actinomycetota
GAG
Leu
>WENV181212333
OFBO01001188
235384
Actinomycetota
GTG
His
>WENV181212290
OFBO01000103
148463
Actinomycetota
TAA
Leu
>WENV181212330
OFBO01000949
363051
Actinomycetota
CTG
Gln
>WENV181212327
OFBO01000512
46608
Actinomycetota
TGA
Ser
>WENV181212296
OFBO01000113
238648
Actinomycetota
GAA
Phe
>WENV181212294
OFBO01000113
149270
Actinomycetota
GTC
Asp
>WENV181212313
OFBO01000280
155153
Actinomycetota
CAT
Met
>WENV181212322
OFBO01000395
235655
Actinomycetota
GTT
Asn
>WENV181212301
OFBO01000134
155156
Actinomycetota
CCG
Arg
>WENV181212311
OFBO01000270
338387
Actinomycetota
>WENV181212270
OFBO01000008
412586
Actinomycetota
CCC
Gly
>WENV181212339
OFBO01002147
46609
Actinomycetota
CGA
Ser
>WENV181212291
OFBO01000109
235609
Actinomycetota
CTT
Lys
>WENV181212340
OFBO01002182
411683
Actinomycetota
CCC
Gly
>WENV181212341
OFBO01002385
148476
Actinomycetota
GGG
Pro
>WENV181212326
OFBO01000491
235604
Actinomycetota
CCT
Arg
>WENV181212309
OFBO01000261
238649
Actinomycetota
TAC
Val
>WENV181212315
OFBO01000284
359306
Actinomycetota
TCC
Gly
>WENV181212323
OFBO01000395
155350
Actinomycetota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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