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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181225701
OFDJ01000035
235146
Actinomycetota
CGT
Thr
>WENV181225666
OFDJ01000006
235347
Actinomycetota
GGC
Ala
>WENV181225719
OFDJ01000053
235346
Actinomycetota
CCG
Arg
>WENV181225673
OFDJ01000012
3239
Actinomycetota
GCT
Ser
>WENV181225723
OFDJ01000053
123202
Actinomycetota
ACG
Arg
>WENV181225658
OFDJ01000001
201717
Actinomycetota
CTT
Lys
>WENV181225976
OFDJ01003763
314498
Actinomycetota
GGC
Ala
>WENV181225663
OFDJ01000004
235194
Actinomycetota
GTG
His
>WENV181225669
OFDJ01000006
158720
Actinomycetota
ACG
Arg
>WENV181225654
OFDJ01000001
411601
Actinomycetota
CCC
Gly
>WENV181225696
OFDJ01000032
144826
Actinomycetota
GGG
Pro
>WENV181225704
OFDJ01000037
23370
Actinomycetota
GCT
Ser
>WENV181225684
OFDJ01000021
174149
Actinomycetota
GAT
Ile
>WENV181225744
OFDJ01000087
338239
Actinomycetota
TTC
Glu
>WENV181225685
OFDJ01000021
235174
Actinomycetota
TGC
Ala
>WENV181225657
OFDJ01000001
235101
Actinomycetota
TTT
Lys
>WENV181225697
OFDJ01000033
121510
Actinomycetota
TAA
Leu
>WENV181225738
OFDJ01000081
356045
Actinomycetota
GAC
Val
>WENV181225707
OFDJ01000038
44855
Actinomycetota
TGA
Ser
>WENV181225739
OFDJ01000081
235199
Actinomycetota
CAC
Val
>WENV181225705
OFDJ01000037
44862
Actinomycetota
CGA
Ser
>WENV181225720
OFDJ01000053
338235
Actinomycetota
CCC
Gly
>WENV181225699
OFDJ01000035
313386
Actinomycetota
CGT
Thr
>WENV181225721
OFDJ01000053
123201
Actinomycetota
TTT
Lys
>WENV181225717
OFDJ01000053
95591
Actinomycetota
GTA
Tyr
>WENV181225722
OFDJ01000053
338236
Actinomycetota
GAA
Phe
>WENV181225656
OFDJ01000001
367535
Actinomycetota
CTG
Gln
>WENV181225665
OFDJ01000006
413665
Actinomycetota
TTG
Gln
>WENV181225736
OFDJ01000081
254857
Actinomycetota
CCG
Arg
>WENV181225703
OFDJ01000037
144700
Actinomycetota
CAT
Met
>WENV181225655
OFDJ01000001
295695
Actinomycetota
CTC
Glu
>WENV181225780
OFDJ01000247
235148
Actinomycetota
GTT
Asn
>WENV181225652
OFDJ01000001
53078
Actinomycetota
GGA
Ser
>WENV181225674
OFDJ01000012
338238
Actinomycetota
CCA
Trp
>WENV181225714
OFDJ01000045
144825
Actinomycetota
CAT
Met
>WENV181225715
OFDJ01000045
235348
Actinomycetota
CCT
Arg
>WENV181225726
OFDJ01000053
37521
Actinomycetota
GCT
Ser
>WENV181225700
OFDJ01000035
113601
Actinomycetota
TAG
Leu
>WENV181225667
OFDJ01000006
144595
Actinomycetota
CAA
Leu
>WENV181226006
OFDJ01006643
240124
Actinomycetota
CGT
Thr
>WENV181225695
OFDJ01000030
17009
Actinomycetota
GAG
Leu
>WENV181225653
OFDJ01000001
80622
Actinomycetota
CAG
Leu
>WENV181225718
OFDJ01000053
411598
Actinomycetota
CCA
Trp
>WENV181225664
OFDJ01000005
144660
Actinomycetota
TAC
Val
>WENV181225727
OFDJ01000053
411599
Actinomycetota
TTG
Gln
>WENV181225702
OFDJ01000037
95593
Actinomycetota
>WENV181225662
OFDJ01000004
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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