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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
454 Sequencing (SRP001806)
Anticodon = GTC
HIT:
39 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.235074 (5 seq.)
>WENV170607837
FUWD010859527
[FUWD] metagenome; unknown
204
126
-
Asp
GTC
[ENA]
¢þ
>SRA1025708
SRR035085.69903
454 Sequencing (SRP001806)
234
312
+
Asp
GTC
[SRA]
>SRA1026042
SRR035085.131818
454 Sequencing (SRP001806)
234
312
+
Asp
GTC
[SRA]
>SRA1026047
SRR035085.132141
454 Sequencing (SRP001806)
237
315
+
Asp
GTC
[SRA]
>SRA1026235
SRR035085.168451
454 Sequencing (SRP001806)
318
396
+
Asp
GTC
[SRA]
Identical group No.235075 (1 seq.)
>SRA1025718
SRR035085.70610
454 Sequencing (SRP001806)
91
13
-
Asp
GTC
[SRA]
Identical group No.235078 (5 seq.)
>WENV170620393
FUWD013030998
[FUWD] metagenome; unknown
5362
5284
-
Asp
GTC
[ENA]
¢þ
>WENV170628531
FUWD013248538
[FUWD] metagenome; unknown
5362
5284
-
Asp
GTC
[ENA]
¢þ
>SRA1025978
SRR035085.120311
454 Sequencing (SRP001806)
237
159
-
Asp
GTC
[SRA]
>SRA1032286
SRR035087.595613
454 Sequencing (SRP001808)
357
279
-
Asp
GTC
[SRA]
>SRA1034031
SRR035088.458571
454 Sequencing (SRP001809)
210
132
-
Asp
GTC
[SRA]
Identical group No.240788 (7 seq.)
>WENV170600989
FUWD010151795
[FUWD] metagenome; unknown
316
393
+
Asp
GTC
[ENA]
¢þ
>SRA1025554
SRR035085.38318
454 Sequencing (SRP001806)
298
221
-
Asp
GTC
[SRA]
>SRA1026552
SRR035085.226836
454 Sequencing (SRP001806)
255
178
-
Asp
GTC
[SRA]
>SRA1029314
SRR035087.108007
454 Sequencing (SRP001808)
69
146
+
Asp
GTC
[SRA]
>SRA1035988
SRR035089.421457
454 Sequencing (SRP001810)
244
321
+
Asp
GTC
[SRA]
>SRA1036490
SRR035089.532127
454 Sequencing (SRP001810)
316
393
+
Asp
GTC
[SRA]
>SRA1050280
SRR035095.229451
454 Sequencing (SRP001816)
384
461
+
Asp
GTC
[SRA]
Identical group No.240794 (1 seq.)
>SRA1025660
SRR035085.60114
454 Sequencing (SRP001806)
302
377
+
Asp
GTC
[SRA]
Identical group No.240795 (3 seq.)
>WENV170611836
FUWD012413796
[FUWD] metagenome; unknown
313
389
+
Asp
GTC
[ENA]
¢þ
>SRA1025680
SRR035085.64965
454 Sequencing (SRP001806)
324
400
+
Asp
GTC
[SRA]
>SRA1047843
SRR035094.52252
454 Sequencing (SRP001815)
106
182
+
Asp
GTC
[SRA]
Identical group No.240800 (149 seq.)
>W1711167337
LVWG01000036
Chlorobiota
Pelodictyon luteolum [LVWG]
120132
120055
-
Asp
GTC
[ENA]
¡û
>C007027
AE006470
Chlorobiota
Chlorobaculum tepidum TLS [AE006470]
1738672
1738746
+
Asp
GTC
[Ensembl]
¡û
>C016774
CP000096
Chlorobiota
Pelodictyon luteolum DSM 273 [CP000096]
346020
345943
-
Asp
GTC
[Ensembl]
¡û
>C018279
CP000607
Chlorobiota
Chlorobium phaeovibrioides [CP000607]
411488
411414
-
Asp
GTC
[Ensembl]
¡û
>WENV183812122
PYLN01000144
[PYLN] freshwater metagenome; meromictic lake
222
147
-
Asp
GTC
[ENA]
¢þ
>WENV170613645
FUWD012815655
[FUWD] metagenome; unknown
5193
5118
-
Asp
GTC
[ENA]
¢þ
>WENV170613670
FUWD012816158
[FUWD] metagenome; unknown
86170
86093
-
Asp
GTC
[ENA]
¢þ
>W09103343
AAJD01000002
Chlorobiota
Chlorobium phaeovibrioides DSM 265 [AAJD]
108316
108241
-
Asp
GTC
[ENA]
¡û
>SRA1019934
SRR035083.24761
454 Sequencing (SRP001804)
400
325
-
Asp
GTC
[SRA]
>SRA1020025
SRR035083.43241
454 Sequencing (SRP001804)
454
379
-
Asp
GTC
[SRA]
>SRA1020063
SRR035083.52094
454 Sequencing (SRP001804)
243
168
-
Asp
GTC
[SRA]
>SRA1020111
SRR035083.58815
454 Sequencing (SRP001804)
248
173
-
Asp
GTC
[SRA]
>SRA1020167
SRR035083.65552
454 Sequencing (SRP001804)
301
226
-
Asp
GTC
[SRA]
>SRA1020332
SRR035083.98284
454 Sequencing (SRP001804)
304
379
+
Asp
GTC
[SRA]
>SRA1020347
SRR035083.100193
454 Sequencing (SRP001804)
171
246
+
Asp
GTC
[SRA]
>SRA1020388
SRR035083.106350
454 Sequencing (SRP001804)
242
167
-
Asp
GTC
[SRA]
>SRA1020493
SRR035083.122765
454 Sequencing (SRP001804)
243
168
-
Asp
GTC
[SRA]
>SRA1020530
SRR035083.130798
454 Sequencing (SRP001804)
393
318
-
Asp
GTC
[SRA]
>SRA1020733
SRR035083.157159
454 Sequencing (SRP001804)
125
200
+
Asp
GTC
[SRA]
>SRA1020860
SRR035083.174137
454 Sequencing (SRP001804)
88
163
+
Asp
GTC
[SRA]
>SRA1020882
SRR035083.178769
454 Sequencing (SRP001804)
292
217
-
Asp
GTC
[SRA]
>SRA1020943
SRR035083.188993
454 Sequencing (SRP001804)
156
231
+
Asp
GTC
[SRA]
>SRA1020953
SRR035083.190022
454 Sequencing (SRP001804)
486
411
-
Asp
GTC
[SRA]
>SRA1021302
SRR035083.239188
454 Sequencing (SRP001804)
184
109
-
Asp
GTC
[SRA]
>SRA1021314
SRR035083.240922
454 Sequencing (SRP001804)
346
421
+
Asp
GTC
[SRA]
>SRA1021317
SRR035083.241534
454 Sequencing (SRP001804)
327
402
+
Asp
GTC
[SRA]
>SRA1021407
SRR035083.255451
454 Sequencing (SRP001804)
128
203
+
Asp
GTC
[SRA]
>SRA1021446
SRR035083.260093
454 Sequencing (SRP001804)
319
394
+
Asp
GTC
[SRA]
>SRA1021512
SRR035083.268186
454 Sequencing (SRP001804)
73
148
+
Asp
GTC
[SRA]
>SRA1021555
SRR035083.272582
454 Sequencing (SRP001804)
195
120
-
Asp
GTC
[SRA]
>SRA1021584
SRR035083.276559
454 Sequencing (SRP001804)
234
309
+
Asp
GTC
[SRA]
>SRA1021637
SRR035083.284211
454 Sequencing (SRP001804)
347
422
+
Asp
GTC
[SRA]
>SRA1021639
SRR035083.284610
454 Sequencing (SRP001804)
185
110
-
Asp
GTC
[SRA]
>SRA1021728
SRR035083.297966
454 Sequencing (SRP001804)
38
113
+
Asp
GTC
[SRA]
>SRA1021742
SRR035083.300628
454 Sequencing (SRP001804)
238
313
+
Asp
GTC
[SRA]
>SRA1021869
SRR035083.321391
454 Sequencing (SRP001804)
282
357
+
Asp
GTC
[SRA]
>SRA1021894
SRR035083.326026
454 Sequencing (SRP001804)
79
154
+
Asp
GTC
[SRA]
>SRA1022171
SRR035083.363552
454 Sequencing (SRP001804)
67
142
+
Asp
GTC
[SRA]
>SRA1022240
SRR035083.373215
454 Sequencing (SRP001804)
195
120
-
Asp
GTC
[SRA]
>SRA1022324
SRR035083.389465
454 Sequencing (SRP001804)
101
26
-
Asp
GTC
[SRA]
>SRA1022328
SRR035083.390297
454 Sequencing (SRP001804)
101
26
-
Asp
GTC
[SRA]
>SRA1022451
SRR035083.406456
454 Sequencing (SRP001804)
175
250
+
Asp
GTC
[SRA]
>SRA1022500
SRR035083.414526
454 Sequencing (SRP001804)
195
120
-
Asp
GTC
[SRA]
>SRA1022523
SRR035083.420317
454 Sequencing (SRP001804)
255
180
-
Asp
GTC
[SRA]
>SRA1022551
SRR035083.423132
454 Sequencing (SRP001804)
274
349
+
Asp
GTC
[SRA]
>SRA1022599
SRR035083.430412
454 Sequencing (SRP001804)
57
132
+
Asp
GTC
[SRA]
>SRA1022761
SRR035083.455418
454 Sequencing (SRP001804)
137
62
-
Asp
GTC
[SRA]
>SRA1022778
SRR035083.459111
454 Sequencing (SRP001804)
106
31
-
Asp
GTC
[SRA]
>SRA1022824
SRR035083.467817
454 Sequencing (SRP001804)
312
390
+
Asp
GTC
[SRA]
>SRA1022863
SRR035083.475224
454 Sequencing (SRP001804)
196
121
-
Asp
GTC
[SRA]
>SRA1022891
SRR035083.479429
454 Sequencing (SRP001804)
50
125
+
Asp
GTC
[SRA]
>SRA1022904
SRR035083.483362
454 Sequencing (SRP001804)
135
58
-
Asp
GTC
[SRA]
>SRA1022987
SRR035083.500401
454 Sequencing (SRP001804)
170
95
-
Asp
GTC
[SRA]
>SRA1023053
SRR035083.512485
454 Sequencing (SRP001804)
282
357
+
Asp
GTC
[SRA]
>SRA1023059
SRR035083.513418
454 Sequencing (SRP001804)
247
170
-
Asp
GTC
[SRA]
>SRA1025849
SRR035085.94086
454 Sequencing (SRP001806)
87
10
-
Asp
GTC
[SRA]
>SRA1029199
SRR035087.91266
454 Sequencing (SRP001808)
254
179
-
Asp
GTC
[SRA]
>SRA1032606
SRR035088.61214
454 Sequencing (SRP001809)
182
107
-
Asp
GTC
[SRA]
>SRA1032704
SRR035088.82623
454 Sequencing (SRP001809)
192
267
+
Asp
GTC
[SRA]
>SRA1032803
SRR035088.106465
454 Sequencing (SRP001809)
354
279
-
Asp
GTC
[SRA]
>SRA1033033
SRR035088.155693
454 Sequencing (SRP001809)
261
186
-
Asp
GTC
[SRA]
>SRA1033118
SRR035088.178281
454 Sequencing (SRP001809)
481
406
-
Asp
GTC
[SRA]
>SRA1033341
SRR035088.230067
454 Sequencing (SRP001809)
162
237
+
Asp
GTC
[SRA]
>SRA1034527
SRR035089.116170
454 Sequencing (SRP001810)
187
112
-
Asp
GTC
[SRA]
>SRA1034615
SRR035089.137419
454 Sequencing (SRP001810)
345
270
-
Asp
GTC
[SRA]
>SRA1034642
SRR035089.142754
454 Sequencing (SRP001810)
291
216
-
Asp
GTC
[SRA]
>SRA1034767
SRR035089.169206
454 Sequencing (SRP001810)
140
65
-
Asp
GTC
[SRA]
>SRA1035029
SRR035089.222057
454 Sequencing (SRP001810)
397
322
-
Asp
GTC
[SRA]
>SRA1036037
SRR035089.431527
454 Sequencing (SRP001810)
155
80
-
Asp
GTC
[SRA]
>SRA1036829
SRR035090.19063
454 Sequencing (SRP001811)
361
286
-
Asp
GTC
[SRA]
>SRA1036864
SRR035090.28459
454 Sequencing (SRP001811)
228
151
-
Asp
GTC
[SRA]
>SRA1036866
SRR035090.28943
454 Sequencing (SRP001811)
64
139
+
Asp
GTC
[SRA]
>SRA1036894
SRR035090.32921
454 Sequencing (SRP001811)
230
155
-
Asp
GTC
[SRA]
>SRA1036935
SRR035090.40975
454 Sequencing (SRP001811)
182
107
-
Asp
GTC
[SRA]
>SRA1036942
SRR035090.42725
454 Sequencing (SRP001811)
201
126
-
Asp
GTC
[SRA]
>SRA1037047
SRR035090.64099
454 Sequencing (SRP001811)
360
285
-
Asp
GTC
[SRA]
>SRA1037145
SRR035090.81771
454 Sequencing (SRP001811)
232
307
+
Asp
GTC
[SRA]
>SRA1037173
SRR035090.87426
454 Sequencing (SRP001811)
227
302
+
Asp
GTC
[SRA]
>SRA1037196
SRR035090.91612
454 Sequencing (SRP001811)
118
193
+
Asp
GTC
[SRA]
>SRA1037278
SRR035090.106437
454 Sequencing (SRP001811)
113
38
-
Asp
GTC
[SRA]
>SRA1037294
SRR035090.108192
454 Sequencing (SRP001811)
304
229
-
Asp
GTC
[SRA]
>SRA1037396
SRR035090.128018
454 Sequencing (SRP001811)
358
433
+
Asp
GTC
[SRA]
>SRA1037459
SRR035090.137643
454 Sequencing (SRP001811)
201
126
-
Asp
GTC
[SRA]
>SRA1037462
SRR035090.138036
454 Sequencing (SRP001811)
130
55
-
Asp
GTC
[SRA]
>SRA1037464
SRR035090.138069
454 Sequencing (SRP001811)
228
153
-
Asp
GTC
[SRA]
>SRA1037516
SRR035090.145033
454 Sequencing (SRP001811)
171
246
+
Asp
GTC
[SRA]
>SRA1037559
SRR035090.154830
454 Sequencing (SRP001811)
327
252
-
Asp
GTC
[SRA]
>SRA1037592
SRR035090.159927
454 Sequencing (SRP001811)
294
219
-
Asp
GTC
[SRA]
>SRA1037604
SRR035090.162284
454 Sequencing (SRP001811)
161
86
-
Asp
GTC
[SRA]
>SRA1037710
SRR035090.178084
454 Sequencing (SRP001811)
81
6
-
Asp
GTC
[SRA]
>SRA1037739
SRR035090.185071
454 Sequencing (SRP001811)
330
405
+
Asp
GTC
[SRA]
>SRA1037854
SRR035090.204806
454 Sequencing (SRP001811)
431
506
+
Asp
GTC
[SRA]
>SRA1037885
SRR035090.211749
454 Sequencing (SRP001811)
173
248
+
Asp
GTC
[SRA]
>SRA1037913
SRR035090.217673
454 Sequencing (SRP001811)
385
310
-
Asp
GTC
[SRA]
>SRA1037915
SRR035090.217808
454 Sequencing (SRP001811)
25
100
+
Asp
GTC
[SRA]
>SRA1037997
SRR035090.231383
454 Sequencing (SRP001811)
242
167
-
Asp
GTC
[SRA]
>SRA1038001
SRR035090.232353
454 Sequencing (SRP001811)
101
26
-
Asp
GTC
[SRA]
>SRA1038065
SRR035090.241351
454 Sequencing (SRP001811)
346
271
-
Asp
GTC
[SRA]
>SRA1038122
SRR035090.249420
454 Sequencing (SRP001811)
189
114
-
Asp
GTC
[SRA]
>SRA1038146
SRR035090.254319
454 Sequencing (SRP001811)
337
412
+
Asp
GTC
[SRA]
>SRA1038168
SRR035090.257759
454 Sequencing (SRP001811)
277
352
+
Asp
GTC
[SRA]
>SRA1038188
SRR035090.260734
454 Sequencing (SRP001811)
217
292
+
Asp
GTC
[SRA]
>SRA1038264
SRR035090.276513
454 Sequencing (SRP001811)
372
297
-
Asp
GTC
[SRA]
>SRA1038288
SRR035090.280359
454 Sequencing (SRP001811)
246
171
-
Asp
GTC
[SRA]
>SRA1038306
SRR035090.284671
454 Sequencing (SRP001811)
349
274
-
Asp
GTC
[SRA]
>SRA1038507
SRR035090.317894
454 Sequencing (SRP001811)
280
355
+
Asp
GTC
[SRA]
>SRA1038567
SRR035090.328306
454 Sequencing (SRP001811)
57
132
+
Asp
GTC
[SRA]
>SRA1038642
SRR035090.342220
454 Sequencing (SRP001811)
201
126
-
Asp
GTC
[SRA]
>SRA1038687
SRR035090.350196
454 Sequencing (SRP001811)
343
418
+
Asp
GTC
[SRA]
>SRA1038699
SRR035090.351723
454 Sequencing (SRP001811)
344
419
+
Asp
GTC
[SRA]
>SRA1038722
SRR035090.354561
454 Sequencing (SRP001811)
209
134
-
Asp
GTC
[SRA]
>SRA1038747
SRR035090.359227
454 Sequencing (SRP001811)
56
131
+
Asp
GTC
[SRA]
>SRA1038753
SRR035090.360194
454 Sequencing (SRP001811)
11
86
+
Asp
GTC
[SRA]
>SRA1038775
SRR035090.363836
454 Sequencing (SRP001811)
318
243
-
Asp
GTC
[SRA]
>SRA1038854
SRR035090.380403
454 Sequencing (SRP001811)
260
185
-
Asp
GTC
[SRA]
>SRA1038855
SRR035090.381107
454 Sequencing (SRP001811)
379
454
+
Asp
GTC
[SRA]
>SRA1038889
SRR035090.388971
454 Sequencing (SRP001811)
267
192
-
Asp
GTC
[SRA]
>SRA1038896
SRR035090.390215
454 Sequencing (SRP001811)
171
96
-
Asp
GTC
[SRA]
>SRA1038910
SRR035090.392403
454 Sequencing (SRP001811)
199
124
-
Asp
GTC
[SRA]
>SRA1038955
SRR035090.400252
454 Sequencing (SRP001811)
57
132
+
Asp
GTC
[SRA]
>SRA1038962
SRR035090.401275
454 Sequencing (SRP001811)
292
367
+
Asp
GTC
[SRA]
>SRA1038989
SRR035090.404327
454 Sequencing (SRP001811)
169
244
+
Asp
GTC
[SRA]
>SRA1039208
SRR035090.443589
454 Sequencing (SRP001811)
144
221
+
Asp
GTC
[SRA]
>SRA1039211
SRR035090.445157
454 Sequencing (SRP001811)
263
188
-
Asp
GTC
[SRA]
>SRA1039215
SRR035090.445866
454 Sequencing (SRP001811)
204
129
-
Asp
GTC
[SRA]
>SRA1039243
SRR035090.450250
454 Sequencing (SRP001811)
233
308
+
Asp
GTC
[SRA]
>SRA1039268
SRR035090.455081
454 Sequencing (SRP001811)
282
357
+
Asp
GTC
[SRA]
>SRA1039359
SRR035090.477166
454 Sequencing (SRP001811)
58
133
+
Asp
GTC
[SRA]
>SRA1039455
SRR035090.496071
454 Sequencing (SRP001811)
369
294
-
Asp
GTC
[SRA]
>SRA1039582
SRR035090.520322
454 Sequencing (SRP001811)
86
161
+
Asp
GTC
[SRA]
>SRA1039637
SRR035090.534263
454 Sequencing (SRP001811)
345
270
-
Asp
GTC
[SRA]
>SRA1039771
SRR035090.565874
454 Sequencing (SRP001811)
25
100
+
Asp
GTC
[SRA]
>SRA1039927
SRR035090.605288
454 Sequencing (SRP001811)
199
124
-
Asp
GTC
[SRA]
>SRA1039953
SRR035090.612556
454 Sequencing (SRP001811)
11
86
+
Asp
GTC
[SRA]
>SRA1043070
SRR035092.36134
454 Sequencing (SRP001813)
436
361
-
Asp
GTC
[SRA]
>SRA1043611
SRR035092.148490
454 Sequencing (SRP001813)
439
364
-
Asp
GTC
[SRA]
>SRA1045659
SRR035093.142692
454 Sequencing (SRP001814)
76
-1
-
Asp
GTC
[SRA]
>SRA1045961
SRR035093.206390
454 Sequencing (SRP001814)
248
173
-
Asp
GTC
[SRA]
>SRA1046134
SRR035093.243331
454 Sequencing (SRP001814)
222
147
-
Asp
GTC
[SRA]
>SRA1047223
SRR035093.487213
454 Sequencing (SRP001814)
27
102
+
Asp
GTC
[SRA]
>SRA1047814
SRR035094.46168
454 Sequencing (SRP001815)
257
182
-
Asp
GTC
[SRA]
>SRA1049746
SRR035095.132103
454 Sequencing (SRP001816)
235
160
-
Asp
GTC
[SRA]
>SRA1049753
SRR035095.134575
454 Sequencing (SRP001816)
376
301
-
Asp
GTC
[SRA]
>SRA1054286
SRR035099.100189
454 Sequencing (SRP001820)
100
25
-
Asp
GTC
[SRA]
>SRA1054345
SRR035099.111395
454 Sequencing (SRP001820)
195
120
-
Asp
GTC
[SRA]
>SRA1054366
SRR035099.116255
454 Sequencing (SRP001820)
303
228
-
Asp
GTC
[SRA]
>SRA1054588
SRR035099.169159
454 Sequencing (SRP001820)
66
141
+
Asp
GTC
[SRA]
>SRA1054693
SRR035099.189538
454 Sequencing (SRP001820)
343
268
-
Asp
GTC
[SRA]
>W1610977668
LVWG01000036
Chlorobiota
Pelodictyon luteolum [LVWG]
120132
120055
-
Asp
GTC
[ENA]
¡û
Identical group No.240812 (1 seq.)
>SRA1026192
SRR035085.161495
454 Sequencing (SRP001806)
144
221
+
Asp
GTC
[SRA]
Identical group No.240821 (1 seq.)
>SRA1026302
SRR035085.182179
454 Sequencing (SRP001806)
92
167
+
Asp
GTC
[SRA]
Identical group No.272241 (12 seq.)
>WENV170600023
FUWD010103079
[FUWD] metagenome; unknown
109
33
-
Asp
GTC
[ENA]
¢þ
>WENV170616738
FUWD012901011
[FUWD] metagenome; unknown
434
510
+
Asp
GTC
[ENA]
¢þ
>WENV170616739
FUWD012901012
[FUWD] metagenome; unknown
40
116
+
Asp
GTC
[ENA]
¢þ
>SRA1025463
SRR035085.15289
454 Sequencing (SRP001806)
278
354
+
Asp
GTC
[SRA]
>SRA1025967
SRR035085.119232
454 Sequencing (SRP001806)
288
364
+
Asp
GTC
[SRA]
>SRA1026649
SRR035085.249234
454 Sequencing (SRP001806)
20
96
+
Asp
GTC
[SRA]
>SRA1029592
SRR035087.149565
454 Sequencing (SRP001808)
260
336
+
Asp
GTC
[SRA]
>SRA1030285
SRR035087.256102
454 Sequencing (SRP001808)
109
33
-
Asp
GTC
[SRA]
>SRA1030669
SRR035087.311806
454 Sequencing (SRP001808)
189
265
+
Asp
GTC
[SRA]
>SRA1031350
SRR035087.417028
454 Sequencing (SRP001808)
434
358
-
Asp
GTC
[SRA]
>SRA1034584
SRR035089.129310
454 Sequencing (SRP001810)
288
364
+
Asp
GTC
[SRA]
>SRA1035910
SRR035089.400707
454 Sequencing (SRP001810)
238
314
+
Asp
GTC
[SRA]
Identical group No.272244 (2 seq.)
>SRA1025474
SRR035085.18741
454 Sequencing (SRP001806)
293
367
+
Asp
GTC
[SRA]
>SRA1034301
SRR035089.52395
454 Sequencing (SRP001810)
335
409
+
Asp
GTC
[SRA]
Identical group No.272247 (6 seq.)
>WENV180581638
OCMK01021044
[OCMK] metagenome; diffuse fluid
188
112
-
Asp
GTC
[ENA]
¢þ
>WENV181206697
OFAW01002369
[OFAW] metagenome; hydrothermal vent
493
569
+
Asp
GTC
[ENA]
¢þ
>SRA1025500
SRR035085.25970
454 Sequencing (SRP001806)
338
262
-
Asp
GTC
[SRA]
>SRA1025551
SRR035085.38051
454 Sequencing (SRP001806)
337
261
-
Asp
GTC
[SRA]
>SRA1025841
SRR035085.93491
454 Sequencing (SRP001806)
336
260
-
Asp
GTC
[SRA]
>SRA1026446
SRR035085.208495
454 Sequencing (SRP001806)
118
194
+
Asp
GTC
[SRA]
Identical group No.272249 (8 seq.)
>WENV170601740
FUWD010191274
[FUWD] metagenome; unknown
732
656
-
Asp
GTC
[ENA]
¢þ
>WENV170626888
FUWD013229979
[FUWD] metagenome; unknown
20424
20350
-
Asp
GTC
[ENA]
¢þ
>SRA1017715
SRR035082.184465
454 Sequencing (SRP001803)
190
264
+
Asp
GTC
[SRA]
>SRA1025509
SRR035085.27857
454 Sequencing (SRP001806)
247
173
-
Asp
GTC
[SRA]
>SRA1043943
SRR035092.199396
454 Sequencing (SRP001813)
112
36
-
Asp
GTC
[SRA]
>SRA1049694
SRR035095.120697
454 Sequencing (SRP001816)
286
363
+
Asp
GTC
[SRA]
>SRA1049911
SRR035095.158357
454 Sequencing (SRP001816)
285
362
+
Asp
GTC
[SRA]
>SRA1050147
SRR035095.200471
454 Sequencing (SRP001816)
286
363
+
Asp
GTC
[SRA]
Identical group No.272256 (1 seq.)
>SRA1025527
SRR035085.33736
454 Sequencing (SRP001806)
297
371
+
Asp
GTC
[SRA]
Identical group No.272263 (3 seq.)
>WENV170611875
FUWD012427245
[FUWD] metagenome; unknown
200
276
+
Asp
GTC
[ENA]
¢þ
>SRA1025547
SRR035085.36967
454 Sequencing (SRP001806)
208
284
+
Asp
GTC
[SRA]
>SRA1026310
SRR035085.183408
454 Sequencing (SRP001806)
210
286
+
Asp
GTC
[SRA]
Identical group No.272286 (1 seq.)
>SRA1025678
SRR035085.64876
454 Sequencing (SRP001806)
200
276
+
Asp
GTC
[SRA]
Identical group No.272290 (4 seq.)
>WENV170611877
FUWD012428055
[FUWD] metagenome; unknown
78
2
-
Asp
GTC
[ENA]
¢þ
>SRA1025698
SRR035085.68824
454 Sequencing (SRP001806)
128
52
-
Asp
GTC
[SRA]
>SRA1026346
SRR035085.190749
454 Sequencing (SRP001806)
128
52
-
Asp
GTC
[SRA]
>SRA1032682
SRR035088.78667
454 Sequencing (SRP001809)
38
114
+
Asp
GTC
[SRA]
Identical group No.272327 (1 seq.)
>SRA1025906
SRR035085.106391
454 Sequencing (SRP001806)
380
304
-
Asp
GTC
[SRA]
Identical group No.272350 (2 seq.)
>SRA1026060
SRR035085.134203
454 Sequencing (SRP001806)
322
247
-
Asp
GTC
[SRA]
>SRA1037569
SRR035090.156541
454 Sequencing (SRP001811)
219
144
-
Asp
GTC
[SRA]
Identical group No.272377 (2 seq.)
>WENV170611872
FUWD012425830
[FUWD] metagenome; unknown
212
288
+
Asp
GTC
[ENA]
¢þ
>SRA1026241
SRR035085.169833
454 Sequencing (SRP001806)
232
308
+
Asp
GTC
[SRA]
Identical group No.272398 (1 seq.)
>SRA1026388
SRR035085.199360
454 Sequencing (SRP001806)
319
244
-
Asp
GTC
[SRA]
Identical group No.272408 (1 seq.)
>SRA1026451
SRR035085.209207
454 Sequencing (SRP001806)
298
221
-
Asp
GTC
[SRA]
Identical group No.272420 (3 seq.)
>WENV183516442
OMKS01178897
[OMKS] sediment metagenome; hot spring sediment
418
343
-
Asp
GTC
[ENA]
¢þ
>WENV170611881
FUWD012428890
[FUWD] metagenome; unknown
97
22
-
Asp
GTC
[ENA]
¢þ
>SRA1026492
SRR035085.215965
454 Sequencing (SRP001806)
39
114
+
Asp
GTC
[SRA]
Identical group No.272437 (7 seq.)
>WENV180089157
MPMF02068118
[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
127
203
+
Asp
GTC
[ENA]
¢þ
>WENV183806689
PVBE011138466
[PVBE] marine metagenome; water
3939
3863
-
Asp
GTC
[ENA]
¢þ
>WENV183808868
PVBE011334439
[PVBE] marine metagenome; water
1202
1126
-
Asp
GTC
[ENA]
¢þ
>WENV170779177
LZCG01004371
[LZCG] oil field metagenome; sample BH-FW-1 from oil reservoir
158
84
-
Asp
GTC
[ENA]
¢þ
>SRA1019320
SRR035082.434757
454 Sequencing (SRP001803)
124
50
-
Asp
GTC
[SRA]
>SRA1026579
SRR035085.232454
454 Sequencing (SRP001806)
100
24
-
Asp
GTC
[SRA]
>SRA1044089
SRR035092.222506
454 Sequencing (SRP001813)
83
9
-
Asp
GTC
[SRA]
Identical group No.272438 (1 seq.)
>SRA1026589
SRR035085.233989
454 Sequencing (SRP001806)
3
79
+
Asp
GTC
[SRA]
Identical group No.272446 (1 seq.)
>SRA1026627
SRR035085.244295
454 Sequencing (SRP001806)
303
376
+
Asp
GTC
[SRA]
Identical group No.272453 (5 seq.)
>WENV170607864
FUWD010862676
[FUWD] metagenome; unknown
783
859
+
Asp
GTC
[ENA]
¢þ
>WENV170677134
LDZT01003129
[LDZT] terrestrial metagenome; oil reservoir sample SB1
491
567
+
Asp
GTC
[ENA]
¢þ
>SRA1017309
SRR035082.116192
454 Sequencing (SRP001803)
375
299
-
Asp
GTC
[SRA]
>SRA1026658
SRR035085.251578
454 Sequencing (SRP001806)
161
237
+
Asp
GTC
[SRA]
>SRA1036583
SRR035089.554638
454 Sequencing (SRP001810)
238
314
+
Asp
GTC
[SRA]
Identical group No.272467 (4 seq.)
>WENV170598502
FUWD010037560
[FUWD] metagenome; unknown
232
156
-
Asp
GTC
[ENA]
¢þ
>WENV170698400
LGVF01328112
[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
529
605
+
Asp
GTC
[ENA]
¢þ
>SRA1026712
SRR035085.267784
454 Sequencing (SRP001806)
249
173
-
Asp
GTC
[SRA]
>SRA1034582
SRR035089.128932
454 Sequencing (SRP001810)
112
36
-
Asp
GTC
[SRA]
Identical group No.453291 (12 seq.)
>A171002801
CP003117
Euryarchaeota
Methanothrix harundinacea 6Ac [CP003117]
2305865
2305938
+
Asp
GTC
-
¡û
>WENV181229722
OFEK01000030
[OFEK] activated sludge metagenome; Anaerobic digester
30229
30302
+
Asp
GTC
[ENA]
¢þ
>WENV170668693
LAHQ01015782
[LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over
53
126
+
Asp
GTC
[ENA]
¢þ
>WENV170670432
LAHT01009739
[LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over
2514
2441
-
Asp
GTC
[ENA]
¢þ
>WENV170677461
LDZT01005510
[LDZT] terrestrial metagenome; oil reservoir sample SB1
12595
12667
+
Asp
GTC
[ENA]
¢þ
>WENV170678638
LDZU01003526
[LDZU] terrestrial metagenome; oil reservoir sample SB2
5633
5561
-
Asp
GTC
[ENA]
¢þ
>SRA1025821
SRR035085.89207
454 Sequencing (SRP001806)
138
64
-
Asp
GTC
[SRA]
>W1610613365
LGFT01000022
Euryarchaeota
Methanothrix harundinacea [LGFT]
12595
12667
+
Asp
GTC
[ENA]
¡û
>W1610614353
LGHB01000001
Euryarchaeota
Methanothrix harundinacea [LGHB]
5633
5561
-
Asp
GTC
[ENA]
¡û
>W1610686048
LKUG01000303
Euryarchaeota
Methanosaeta sp. SDB [LKUG]
331
403
+
Asp
GTC
[ENA]
¡û
>W1610945919
LUYE01000018
Euryarchaeota
Methanosarcinales archaeon Methan_01 [LUYE]
33251
33324
+
Asp
GTC
[ENA]
¡û
>W1610945945
LUYF01000045
Euryarchaeota
Methanosarcinales archaeon Methan_02 [LUYF]
4568
4495
-
Asp
GTC
[ENA]
¡û
Identical group No.453350 (1 seq.)
>SRA1026151
SRR035085.153766
454 Sequencing (SRP001806)
199
124
-
Asp
GTC
[SRA]
Identical group No.453365 (1 seq.)
>SRA1026229
SRR035085.167243
454 Sequencing (SRP001806)
418
492
+
Asp
GTC
[SRA]
Identical group No.453434 (8 seq.)
>WENV180311285
OBJT01203110
[OBJT] soil metagenome; soil
27
101
+
Asp
GTC
[ENA]
¢þ
>WENV180347049
OBLN01530569
[OBLN] sediment metagenome; sediment
123
48
-
Asp
GTC
[ENA]
¢þ
>WENV170668272
LADL02002339
[LADL] rock porewater metagenome; Opalinus Clay rock porewater BRC-3 borehole
1776
1701
-
Asp
GTC
[ENA]
¢þ
>SRA1026703
SRR035085.264955
454 Sequencing (SRP001806)
165
90
-
Asp
GTC
[SRA]
>SRA1026768
SRR035085.284805
454 Sequencing (SRP001806)
165
90
-
Asp
GTC
[SRA]
>W1510020484
BBXZ01000116
Chloroflexota
Levilinea saccharolytica KIBI-1 [BBXZ]
44618
44543
-
Asp
GTC
[ENA]
¡û
>W1610612054
LGCM01000048
Chloroflexota
Levilinea saccharolytica [LGCM]
44828
44753
-
Asp
GTC
[ENA]
¡û
>W1710733560
LGCM01000048
Chloroflexota
Levilinea saccharolytica [LGCM]
44828
44753
-
Asp
GTC
[ENA]
¡û
Identical group No.453444 (10 seq.)
>WENV170605185
FUWD010457190
[FUWD] metagenome; unknown
129
204
+
Asp
GTC
[ENA]
¢þ
>WENV170612743
FUWD012676665
[FUWD] metagenome; unknown
166
241
+
Asp
GTC
[ENA]
¢þ
>SRA1026781
SRR035085.289052
454 Sequencing (SRP001806)
132
207
+
Asp
GTC
[SRA]
>SRA1034014
SRR035088.447471
454 Sequencing (SRP001809)
129
202
+
Asp
GTC
[SRA]
>SRA1042895
SRR035091.462727
454 Sequencing (SRP001812)
143
68
-
Asp
GTC
[SRA]
>SRA1043540
SRR035092.134795
454 Sequencing (SRP001813)
168
93
-
Asp
GTC
[SRA]
>SRA1044743
SRR035092.332736
454 Sequencing (SRP001813)
130
55
-
Asp
GTC
[SRA]
>SRA1048030
SRR035094.95388
454 Sequencing (SRP001815)
119
192
+
Asp
GTC
[SRA]
>SRA1048363
SRR035094.157241
454 Sequencing (SRP001815)
176
251
+
Asp
GTC
[SRA]
>SRA1048626
SRR035094.211617
454 Sequencing (SRP001815)
81
156
+
Asp
GTC
[SRA]
Identical group No.654297 (1 seq.)
>SRA1025926
SRR035085.111296
454 Sequencing (SRP001806)
31
104
+
Asp
GTC
[SRA]
Identical group No.654353 (4 seq.)
>WENV170216698
CEPX01246647
[CEPX] marine metagenome genome assembly TARA_037_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
416
489
+
Asp
GTC
[ENA]
¢þ
>WENV170384312
CETX01275689
[CETX] marine metagenome genome assembly TARA_138_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
806
735
-
Asp
GTC
[ENA]
¢þ
>SRA1018562
SRR035082.311596
454 Sequencing (SRP001803)
126
197
+
Asp
GTC
[SRA]
>SRA1026366
SRR035085.194224
454 Sequencing (SRP001806)
294
223
-
Asp
GTC
[SRA]
Identical group No.654660 (1 seq.)
>SRA1026076
SRR035085.138785
454 Sequencing (SRP001806)
143
70
-
Asp
GTC
[SRA]
Identical group No.779819 (1 seq.)
>SRA1026142
SRR035085.152594
454 Sequencing (SRP001806)
166
93
-
Asp
GTC
[SRA]
Identical group No.779834 (1 seq.)
>SRA1026458
SRR035085.210557
454 Sequencing (SRP001806)
128
200
+
Asp
GTC
[SRA]
Identical group No.779844 (13 seq.)
>WENV170601709
FUWD010188841
[FUWD] metagenome; unknown
472
402
-
Asp
GTC
[ENA]
¢þ
>WENV170607821
FUWD010859048
[FUWD] metagenome; unknown
798
728
-
Asp
GTC
[ENA]
¢þ
>WENV170612656
FUWD012652171
[FUWD] metagenome; unknown
84
154
+
Asp
GTC
[ENA]
¢þ
>WENV170626301
FUWD013218626
[FUWD] metagenome; unknown
262
332
+
Asp
GTC
[ENA]
¢þ
>SRA1018829
SRR035082.354299
454 Sequencing (SRP001803)
103
173
+
Asp
GTC
[SRA]
>SRA1018877
SRR035082.362259
454 Sequencing (SRP001803)
236
166
-
Asp
GTC
[SRA]
>SRA1019387
SRR035082.448082
454 Sequencing (SRP001803)
283
213
-
Asp
GTC
[SRA]
>SRA1019601
SRR035082.484969
454 Sequencing (SRP001803)
31
101
+
Asp
GTC
[SRA]
>SRA1026577
SRR035085.232075
454 Sequencing (SRP001806)
367
297
-
Asp
GTC
[SRA]
>SRA1043059
SRR035092.32039
454 Sequencing (SRP001813)
136
206
+
Asp
GTC
[SRA]
>SRA1044355
SRR035092.265406
454 Sequencing (SRP001813)
86
156
+
Asp
GTC
[SRA]
>SRA1044572
SRR035092.303761
454 Sequencing (SRP001813)
97
27
-
Asp
GTC
[SRA]
>SRA1044762
SRR035092.336369
454 Sequencing (SRP001813)
325
395
+
Asp
GTC
[SRA]
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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