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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
454 Sequencing (SRP001812)
Anticodon = GGT
HIT:
52 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.2387 (3 seq.)
>WENV170612397
FUWD012600909
[FUWD] metagenome; unknown
362
457
+
Thr
GGT
[ENA]
¢þ
>SRA1040069
SRR035091.30573
454 Sequencing (SRP001812)
362
457
+
Thr
GGT
[SRA]
>SRA1042916
SRR035091.466705
454 Sequencing (SRP001812)
170
265
+
Thr
GGT
[SRA]
Identical group No.258040 (1 seq.)
>SRA1041272
SRR035091.221935
454 Sequencing (SRP001812)
339
416
+
Thr
GGT
[SRA]
Identical group No.271848 (10 seq.)
>WENV170621134
FUWD013050026
[FUWD] metagenome; unknown
155
231
+
Thr
GGT
[ENA]
¢þ
>WENV170629303
FUWD013266719
[FUWD] metagenome; unknown
155
231
+
Thr
GGT
[ENA]
¢þ
>WENV170677101
LDZT01002448
[LDZT] terrestrial metagenome; oil reservoir sample SB1
1384
1460
+
Thr
GGT
[ENA]
¢þ
>WENV170678014
LDZT01010412
[LDZT] terrestrial metagenome; oil reservoir sample SB1
1415
1339
-
Thr
GGT
[ENA]
¢þ
>SRA1017819
SRR035082.202293
454 Sequencing (SRP001803)
283
359
+
Thr
GGT
[SRA]
>SRA1030147
SRR035087.233683
454 Sequencing (SRP001808)
346
270
-
Thr
GGT
[SRA]
>SRA1042043
SRR035091.331815
454 Sequencing (SRP001812)
522
446
-
Thr
GGT
[SRA]
>SRA1050636
SRR035095.310644
454 Sequencing (SRP001816)
165
241
+
Thr
GGT
[SRA]
>W1610613999
LGGO01000180
Unclassified
candidate division WS6 bacterium 34_10 [LGGO]
1415
1339
-
Thr
GGT
[ENA]
¡û
>W1710735082
LGGO01000180
Unclassified
candidate division WS6 bacterium 34_10 [LGGO]
1415
1339
-
Thr
GGT
[ENA]
¡û
Identical group No.357578 (7 seq.)
>WENV170600494
FUWD010129541
[FUWD] metagenome; unknown
375
299
-
Thr
GGT
[ENA]
¢þ
>WENV170600893
FUWD010146648
[FUWD] metagenome; unknown
339
413
+
Thr
GGT
[ENA]
¢þ
>WENV170626172
FUWD013215719
[FUWD] metagenome; unknown
198
122
-
Thr
GGT
[ENA]
¢þ
>SRA1033519
SRR035088.277121
454 Sequencing (SRP001809)
375
299
-
Thr
GGT
[SRA]
>SRA1041732
SRR035091.283847
454 Sequencing (SRP001812)
304
228
-
Thr
GGT
[SRA]
>SRA1041917
SRR035091.315427
454 Sequencing (SRP001812)
344
270
-
Thr
GGT
[SRA]
>SRA1042237
SRR035091.360295
454 Sequencing (SRP001812)
198
122
-
Thr
GGT
[SRA]
Identical group No.357705 (3 seq.)
>WENV170603313
FUWD010300719
[FUWD] metagenome; unknown
366
442
+
Thr
GGT
[ENA]
¢þ
>SRA1040464
SRR035091.101619
454 Sequencing (SRP001812)
106
182
+
Thr
GGT
[SRA]
>SRA1044372
SRR035092.268746
454 Sequencing (SRP001813)
212
136
-
Thr
GGT
[SRA]
Identical group No.357997 (4 seq.)
>WENV170608149
FUWD010896425
[FUWD] metagenome; unknown
340
416
+
Thr
GGT
[ENA]
¢þ
>SRA1040092
SRR035091.37338
454 Sequencing (SRP001812)
228
152
-
Thr
GGT
[SRA]
>SRA1040862
SRR035091.160529
454 Sequencing (SRP001812)
105
181
+
Thr
GGT
[SRA]
>SRA1042137
SRR035091.344228
454 Sequencing (SRP001812)
228
304
+
Thr
GGT
[SRA]
Identical group No.358351 (3 seq.)
>WENV170612443
FUWD012612377
[FUWD] metagenome; unknown
107
33
-
Thr
GGT
[ENA]
¢þ
>SRA1040812
SRR035091.153190
454 Sequencing (SRP001812)
107
33
-
Thr
GGT
[SRA]
>SRA1041903
SRR035091.313543
454 Sequencing (SRP001812)
171
97
-
Thr
GGT
[SRA]
Identical group No.381298 (1 seq.)
>SRA1041736
SRR035091.284465
454 Sequencing (SRP001812)
52
126
+
Thr
GGT
[SRA]
Identical group No.381299 (1 seq.)
>SRA1041749
SRR035091.287697
454 Sequencing (SRP001812)
588
512
-
Thr
GGT
[SRA]
Identical group No.381377 (1 seq.)
>SRA1042903
SRR035091.464144
454 Sequencing (SRP001812)
527
451
-
Thr
GGT
[SRA]
Identical group No.453239 (6 seq.)
>WENV170622253
FUWD013094317
[FUWD] metagenome; unknown
96
169
+
Thr
GGT
[ENA]
¢þ
>WENV170630474
FUWD013309054
[FUWD] metagenome; unknown
96
169
+
Thr
GGT
[ENA]
¢þ
>SRA1019195
SRR035082.416889
454 Sequencing (SRP001803)
350
275
-
Thr
GGT
[SRA]
>SRA1025593
SRR035085.44480
454 Sequencing (SRP001806)
109
182
+
Thr
GGT
[SRA]
>SRA1040896
SRR035091.165183
454 Sequencing (SRP001812)
50
123
+
Thr
GGT
[SRA]
>SRA1041294
SRR035091.224436
454 Sequencing (SRP001812)
49
122
+
Thr
GGT
[SRA]
Identical group No.453380 (121 seq.)
>W1710858999
LMBR01000100
Chlorobiota
Chlorobium limicola [LMBR]
4041
3968
-
Thr
GGT
[ENA]
¡û
>W1711136058
LUZT01000005
Chlorobiota
Chlorobiales bacterium Clorobi_01 [LUZT]
506452
506377
-
Thr
GGT
[ENA]
¡û
>W1711626077
MPJE01000019
Chlorobiota
Chlorobium sp. KB01 [MPJE]
35457
35384
-
Thr
GGT
[ENA]
¡û
>C171049443
CP016432
Chlorobiota
Prosthecochloris sp. CIB 2401 [CP016432]
263560
263633
+
Thr
GGT
-
¡û
>C171060552
CP017305
Chlorobiota
Chlorobaculum limnaeum DSM 1677 [CP017305]
82922
82997
+
Thr
GGT
-
¡û
>C005289
CP000108
Chlorobiota
Chlorobium chlorochromatii [CP000108]
399460
399532
+
Thr
GGT
[Ensembl]
¡û
>C006575
CP000492
Chlorobiota
Chlorobium phaeobacteroides DSM 266 [CP000492]
253131
253203
+
Thr
GGT
[Ensembl]
¡û
>C007006
AE006470
Chlorobiota
Chlorobaculum tepidum TLS [AE006470]
152200
152275
+
Thr
GGT
[Ensembl]
¡û
>C018258
CP000607
Chlorobiota
Chlorobium phaeovibrioides [CP000607]
1795457
1795385
-
Thr
GGT
[Ensembl]
¡û
>w018061
AASE01000035
Chlorobiota
Chlorobium ferrooxidans DSM 13031 [AASE]
11200
11275
+
Thr
GGT
[ENA]
¡û
>w007148
AAIJ01000002
Chlorobiota
Prosthecochloris aestuarii DSM 271 [AAIJ]
1441
1364
-
Thr
GGT
[ENA]
¡û
>w006128
AAHJ01000052
Chlorobiota
Chlorobium limicola DSM 245 [AAHJ]
187
264
+
Thr
GGT
[ENA]
¡û
>C08003490
CP001097
Chlorobiota
Chlorobium limicola DSM 245 [CP001097]
210715
210788
+
Thr
GGT
[Ensembl]
¡û
>C08003631
CP001101
Chlorobiota
Chlorobium phaeobacteroides [CP001101]
311817
311890
+
Thr
GGT
[Ensembl]
¡û
>C08003607
CP001099
Chlorobiota
Chlorobaculum parvum NCIB 8327 [CP001099]
2083370
2083295
-
Thr
GGT
[Ensembl]
¡û
>C08007150
CP001108
Chlorobiota
Prosthecochloris aestuarii DSM 271 [CP001108]
298341
298414
+
Thr
GGT
[Ensembl]
¡û
>WENV183812094
PYLN01000002
[PYLN] freshwater metagenome; meromictic lake
30464
30391
-
Thr
GGT
[ENA]
¢þ
>WENV170598901
FUWD010054310
[FUWD] metagenome; unknown
171
98
-
Thr
GGT
[ENA]
¢þ
>WENV170613994
FUWD012823312
[FUWD] metagenome; unknown
14696
14769
+
Thr
GGT
[ENA]
¢þ
>WENV170624598
FUWD013183728
[FUWD] metagenome; unknown
8246
8319
+
Thr
GGT
[ENA]
¢þ
>WENV170624600
FUWD013183729
[FUWD] metagenome; unknown
2
75
+
Thr
GGT
[ENA]
¢þ
>WENV170632881
FUWD013388245
[FUWD] metagenome; unknown
8246
8319
+
Thr
GGT
[ENA]
¢þ
>WENV170632883
FUWD013388246
[FUWD] metagenome; unknown
2
75
+
Thr
GGT
[ENA]
¢þ
>W09102644
AAIB01000004
Chlorobiota
Chlorobium phaeobacteroides DSM 266 [AAIB]
40634
40561
-
Thr
GGT
[ENA]
¡û
>W09103349
AAJD01000003
Chlorobiota
Chlorobium phaeovibrioides DSM 265 [AAJD]
204506
204579
+
Thr
GGT
[ENA]
¡û
>W1810062179
PDNX01000007
Chlorobiota
Prosthecochloris sp. ZM [PDNX]
2640766
2640693
-
Thr
GGT
[ENA]
¡û
>SRA1019877
SRR035083.10803
454 Sequencing (SRP001804)
140
67
-
Thr
GGT
[SRA]
>SRA1019904
SRR035083.18618
454 Sequencing (SRP001804)
117
44
-
Thr
GGT
[SRA]
>SRA1019914
SRR035083.20556
454 Sequencing (SRP001804)
24
97
+
Thr
GGT
[SRA]
>SRA1019942
SRR035083.26255
454 Sequencing (SRP001804)
24
97
+
Thr
GGT
[SRA]
>SRA1020002
SRR035083.39351
454 Sequencing (SRP001804)
23
96
+
Thr
GGT
[SRA]
>SRA1020043
SRR035083.46700
454 Sequencing (SRP001804)
42
115
+
Thr
GGT
[SRA]
>SRA1020091
SRR035083.56609
454 Sequencing (SRP001804)
221
294
+
Thr
GGT
[SRA]
>SRA1020185
SRR035083.69195
454 Sequencing (SRP001804)
47
120
+
Thr
GGT
[SRA]
>SRA1020268
SRR035083.86654
454 Sequencing (SRP001804)
56
129
+
Thr
GGT
[SRA]
>SRA1020359
SRR035083.101598
454 Sequencing (SRP001804)
142
69
-
Thr
GGT
[SRA]
>SRA1020401
SRR035083.109098
454 Sequencing (SRP001804)
418
345
-
Thr
GGT
[SRA]
>SRA1020410
SRR035083.110863
454 Sequencing (SRP001804)
140
67
-
Thr
GGT
[SRA]
>SRA1020471
SRR035083.119812
454 Sequencing (SRP001804)
357
282
-
Thr
GGT
[SRA]
>SRA1020492
SRR035083.122621
454 Sequencing (SRP001804)
466
539
+
Thr
GGT
[SRA]
>SRA1020735
SRR035083.157200
454 Sequencing (SRP001804)
453
526
+
Thr
GGT
[SRA]
>SRA1020770
SRR035083.162038
454 Sequencing (SRP001804)
138
211
+
Thr
GGT
[SRA]
>SRA1021042
SRR035083.202516
454 Sequencing (SRP001804)
81
8
-
Thr
GGT
[SRA]
>SRA1021398
SRR035083.254628
454 Sequencing (SRP001804)
14
87
+
Thr
GGT
[SRA]
>SRA1021577
SRR035083.275398
454 Sequencing (SRP001804)
121
194
+
Thr
GGT
[SRA]
>SRA1021652
SRR035083.287571
454 Sequencing (SRP001804)
23
96
+
Thr
GGT
[SRA]
>SRA1022213
SRR035083.368908
454 Sequencing (SRP001804)
23
96
+
Thr
GGT
[SRA]
>SRA1022484
SRR035083.412217
454 Sequencing (SRP001804)
152
225
+
Thr
GGT
[SRA]
>SRA1022663
SRR035083.439134
454 Sequencing (SRP001804)
478
405
-
Thr
GGT
[SRA]
>SRA1023065
SRR035083.514021
454 Sequencing (SRP001804)
38
111
+
Thr
GGT
[SRA]
>SRA1023079
SRR035083.516646
454 Sequencing (SRP001804)
38
111
+
Thr
GGT
[SRA]
>SRA1023095
SRR035083.519559
454 Sequencing (SRP001804)
14
87
+
Thr
GGT
[SRA]
>SRA1026321
SRR035085.185260
454 Sequencing (SRP001806)
238
165
-
Thr
GGT
[SRA]
>SRA1028807
SRR035087.12237
454 Sequencing (SRP001808)
248
321
+
Thr
GGT
[SRA]
>SRA1029075
SRR035087.69287
454 Sequencing (SRP001808)
238
311
+
Thr
GGT
[SRA]
>SRA1029252
SRR035087.98062
454 Sequencing (SRP001808)
188
261
+
Thr
GGT
[SRA]
>SRA1032562
SRR035088.47530
454 Sequencing (SRP001809)
128
55
-
Thr
GGT
[SRA]
>SRA1032626
SRR035088.66700
454 Sequencing (SRP001809)
162
235
+
Thr
GGT
[SRA]
>SRA1032721
SRR035088.86779
454 Sequencing (SRP001809)
100
27
-
Thr
GGT
[SRA]
>SRA1032863
SRR035088.118389
454 Sequencing (SRP001809)
108
181
+
Thr
GGT
[SRA]
>SRA1033010
SRR035088.151199
454 Sequencing (SRP001809)
155
82
-
Thr
GGT
[SRA]
>SRA1036340
SRR035089.498190
454 Sequencing (SRP001810)
296
369
+
Thr
GGT
[SRA]
>SRA1036591
SRR035089.556216
454 Sequencing (SRP001810)
391
318
-
Thr
GGT
[SRA]
>SRA1036818
SRR035090.13946
454 Sequencing (SRP001811)
445
372
-
Thr
GGT
[SRA]
>SRA1036877
SRR035090.30685
454 Sequencing (SRP001811)
120
193
+
Thr
GGT
[SRA]
>SRA1036888
SRR035090.31835
454 Sequencing (SRP001811)
292
217
-
Thr
GGT
[SRA]
>SRA1036930
SRR035090.40403
454 Sequencing (SRP001811)
378
451
+
Thr
GGT
[SRA]
>SRA1037067
SRR035090.69197
454 Sequencing (SRP001811)
119
192
+
Thr
GGT
[SRA]
>SRA1037201
SRR035090.92308
454 Sequencing (SRP001811)
116
189
+
Thr
GGT
[SRA]
>SRA1037333
SRR035090.117969
454 Sequencing (SRP001811)
143
216
+
Thr
GGT
[SRA]
>SRA1037528
SRR035090.147682
454 Sequencing (SRP001811)
420
347
-
Thr
GGT
[SRA]
>SRA1037617
SRR035090.163946
454 Sequencing (SRP001811)
54
127
+
Thr
GGT
[SRA]
>SRA1037698
SRR035090.175882
454 Sequencing (SRP001811)
400
327
-
Thr
GGT
[SRA]
>SRA1038016
SRR035090.234080
454 Sequencing (SRP001811)
11
84
+
Thr
GGT
[SRA]
>SRA1038035
SRR035090.236153
454 Sequencing (SRP001811)
147
74
-
Thr
GGT
[SRA]
>SRA1038150
SRR035090.254382
454 Sequencing (SRP001811)
132
205
+
Thr
GGT
[SRA]
>SRA1038154
SRR035090.255300
454 Sequencing (SRP001811)
17
90
+
Thr
GGT
[SRA]
>SRA1038176
SRR035090.258800
454 Sequencing (SRP001811)
400
327
-
Thr
GGT
[SRA]
>SRA1038436
SRR035090.305016
454 Sequencing (SRP001811)
301
228
-
Thr
GGT
[SRA]
>SRA1038444
SRR035090.305700
454 Sequencing (SRP001811)
132
205
+
Thr
GGT
[SRA]
>SRA1038554
SRR035090.326362
454 Sequencing (SRP001811)
280
207
-
Thr
GGT
[SRA]
>SRA1038702
SRR035090.352109
454 Sequencing (SRP001811)
400
327
-
Thr
GGT
[SRA]
>SRA1038869
SRR035090.384988
454 Sequencing (SRP001811)
42
115
+
Thr
GGT
[SRA]
>SRA1038906
SRR035090.391889
454 Sequencing (SRP001811)
90
163
+
Thr
GGT
[SRA]
>SRA1039073
SRR035090.419604
454 Sequencing (SRP001811)
132
205
+
Thr
GGT
[SRA]
>SRA1039095
SRR035090.423555
454 Sequencing (SRP001811)
8
81
+
Thr
GGT
[SRA]
>SRA1039273
SRR035090.455608
454 Sequencing (SRP001811)
95
168
+
Thr
GGT
[SRA]
>SRA1039381
SRR035090.480843
454 Sequencing (SRP001811)
427
354
-
Thr
GGT
[SRA]
>SRA1039534
SRR035090.509368
454 Sequencing (SRP001811)
103
30
-
Thr
GGT
[SRA]
>SRA1039557
SRR035090.516045
454 Sequencing (SRP001811)
34
107
+
Thr
GGT
[SRA]
>SRA1039592
SRR035090.522699
454 Sequencing (SRP001811)
12
85
+
Thr
GGT
[SRA]
>SRA1039681
SRR035090.543338
454 Sequencing (SRP001811)
35
108
+
Thr
GGT
[SRA]
>SRA1039684
SRR035090.544349
454 Sequencing (SRP001811)
34
107
+
Thr
GGT
[SRA]
>SRA1039814
SRR035090.576203
454 Sequencing (SRP001811)
34
107
+
Thr
GGT
[SRA]
>SRA1039820
SRR035090.577972
454 Sequencing (SRP001811)
346
273
-
Thr
GGT
[SRA]
>SRA1039921
SRR035090.602769
454 Sequencing (SRP001811)
46
119
+
Thr
GGT
[SRA]
>SRA1042508
SRR035091.400276
454 Sequencing (SRP001812)
54
127
+
Thr
GGT
[SRA]
>SRA1046202
SRR035093.253138
454 Sequencing (SRP001814)
243
316
+
Thr
GGT
[SRA]
>SRA1047311
SRR035093.507441
454 Sequencing (SRP001814)
367
294
-
Thr
GGT
[SRA]
>SRA1051991
SRR035098.120491
454 Sequencing (SRP001819)
391
318
-
Thr
GGT
[SRA]
>SRA1053923
SRR035099.1654
454 Sequencing (SRP001820)
104
177
+
Thr
GGT
[SRA]
>SRA1053957
SRR035099.16422
454 Sequencing (SRP001820)
280
205
-
Thr
GGT
[SRA]
>SRA1054176
SRR035099.76427
454 Sequencing (SRP001820)
267
194
-
Thr
GGT
[SRA]
>SRA1054359
SRR035099.115116
454 Sequencing (SRP001820)
263
336
+
Thr
GGT
[SRA]
>SRA1054376
SRR035099.118584
454 Sequencing (SRP001820)
164
91
-
Thr
GGT
[SRA]
>SRA1054529
SRR035099.156388
454 Sequencing (SRP001820)
71
144
+
Thr
GGT
[SRA]
>SRA1054531
SRR035099.156465
454 Sequencing (SRP001820)
84
159
+
Thr
GGT
[SRA]
>SRA1054548
SRR035099.159830
454 Sequencing (SRP001820)
414
341
-
Thr
GGT
[SRA]
>SRA1054564
SRR035099.164290
454 Sequencing (SRP001820)
322
395
+
Thr
GGT
[SRA]
>SRA1054592
SRR035099.169747
454 Sequencing (SRP001820)
257
184
-
Thr
GGT
[SRA]
>SRA1054610
SRR035099.172210
454 Sequencing (SRP001820)
124
51
-
Thr
GGT
[SRA]
>SRA1054650
SRR035099.181707
454 Sequencing (SRP001820)
294
367
+
Thr
GGT
[SRA]
>SRA1054652
SRR035099.181905
454 Sequencing (SRP001820)
214
141
-
Thr
GGT
[SRA]
>SRA1054659
SRR035099.182850
454 Sequencing (SRP001820)
317
244
-
Thr
GGT
[SRA]
>SRA1054685
SRR035099.188520
454 Sequencing (SRP001820)
263
336
+
Thr
GGT
[SRA]
>SRA1054700
SRR035099.190338
454 Sequencing (SRP001820)
130
57
-
Thr
GGT
[SRA]
>SRA1054747
SRR035099.205446
454 Sequencing (SRP001820)
427
354
-
Thr
GGT
[SRA]
>SRA1054760
SRR035099.207667
454 Sequencing (SRP001820)
393
466
+
Thr
GGT
[SRA]
>SRA1054845
SRR035099.228704
454 Sequencing (SRP001820)
189
116
-
Thr
GGT
[SRA]
>W1610721345
LMBR01000100
Chlorobiota
Chlorobium limicola [LMBR]
4041
3968
-
Thr
GGT
[ENA]
¡û
>W1610947178
LUZT01000005
Chlorobiota
Chlorobiales bacterium Clorobi_01 [LUZT]
506452
506377
-
Thr
GGT
[ENA]
¡û
Identical group No.453405 (13 seq.)
>WENV170626766
FUWD013229349
[FUWD] metagenome; unknown
3748
3823
+
Thr
GGT
[ENA]
¢þ
>WENV170632645
FUWD013385546
[FUWD] metagenome; unknown
7580
7655
+
Thr
GGT
[ENA]
¢þ
>SRA1026532
SRR035085.222530
454 Sequencing (SRP001806)
230
305
+
Thr
GGT
[SRA]
>SRA1029822
SRR035087.187542
454 Sequencing (SRP001808)
454
529
+
Thr
GGT
[SRA]
>SRA1040177
SRR035091.53133
454 Sequencing (SRP001812)
83
8
-
Thr
GGT
[SRA]
>SRA1040444
SRR035091.97952
454 Sequencing (SRP001812)
383
308
-
Thr
GGT
[SRA]
>SRA1041812
SRR035091.298185
454 Sequencing (SRP001812)
153
78
-
Thr
GGT
[SRA]
>SRA1042330
SRR035091.373354
454 Sequencing (SRP001812)
105
30
-
Thr
GGT
[SRA]
>SRA1042371
SRR035091.378828
454 Sequencing (SRP001812)
162
237
+
Thr
GGT
[SRA]
>SRA1042378
SRR035091.379073
454 Sequencing (SRP001812)
253
328
+
Thr
GGT
[SRA]
>SRA1042502
SRR035091.398415
454 Sequencing (SRP001812)
237
162
-
Thr
GGT
[SRA]
>SRA1047882
SRR035094.60925
454 Sequencing (SRP001815)
413
488
+
Thr
GGT
[SRA]
>SRA1049759
SRR035095.135359
454 Sequencing (SRP001816)
154
79
-
Thr
GGT
[SRA]
Identical group No.453470 (6 seq.)
>WENV170620736
FUWD013037917
[FUWD] metagenome; unknown
1608
1680
+
Thr
GGT
[ENA]
¢þ
>WENV170628879
FUWD013255133
[FUWD] metagenome; unknown
1608
1680
+
Thr
GGT
[ENA]
¢þ
>SRA1030441
SRR035087.279939
454 Sequencing (SRP001808)
216
288
+
Thr
GGT
[SRA]
>SRA1034223
SRR035089.27487
454 Sequencing (SRP001810)
109
37
-
Thr
GGT
[SRA]
>SRA1036383
SRR035089.507638
454 Sequencing (SRP001810)
413
341
-
Thr
GGT
[SRA]
>SRA1040286
SRR035091.72512
454 Sequencing (SRP001812)
82
154
+
Thr
GGT
[SRA]
Identical group No.453493 (9 seq.)
>WENV170626082
FUWD013213315
[FUWD] metagenome; unknown
503
430
-
Thr
GGT
[ENA]
¢þ
>SRA1028999
SRR035087.57081
454 Sequencing (SRP001808)
146
73
-
Thr
GGT
[SRA]
>SRA1034366
SRR035089.69423
454 Sequencing (SRP001810)
81
8
-
Thr
GGT
[SRA]
>SRA1042748
SRR035091.440205
454 Sequencing (SRP001812)
112
39
-
Thr
GGT
[SRA]
>SRA1043762
SRR035092.171484
454 Sequencing (SRP001813)
342
415
+
Thr
GGT
[SRA]
>SRA1044250
SRR035092.248196
454 Sequencing (SRP001813)
340
413
+
Thr
GGT
[SRA]
>SRA1044313
SRR035092.257663
454 Sequencing (SRP001813)
17
90
+
Thr
GGT
[SRA]
>SRA1044721
SRR035092.328371
454 Sequencing (SRP001813)
339
412
+
Thr
GGT
[SRA]
>SRA1044937
SRR035092.376611
454 Sequencing (SRP001813)
339
412
+
Thr
GGT
[SRA]
Identical group No.453662 (13 seq.)
>WENV170624989
FUWD013189622
[FUWD] metagenome; unknown
5703
5775
+
Thr
GGT
[ENA]
¢þ
>WENV170633249
FUWD013393192
[FUWD] metagenome; unknown
5703
5775
+
Thr
GGT
[ENA]
¢þ
>SRA1035257
SRR035089.269075
454 Sequencing (SRP001810)
84
12
-
Thr
GGT
[SRA]
>SRA1036386
SRR035089.508647
454 Sequencing (SRP001810)
108
36
-
Thr
GGT
[SRA]
>SRA1040427
SRR035091.96128
454 Sequencing (SRP001812)
147
75
-
Thr
GGT
[SRA]
>SRA1040549
SRR035091.113193
454 Sequencing (SRP001812)
81
9
-
Thr
GGT
[SRA]
>SRA1040718
SRR035091.136214
454 Sequencing (SRP001812)
415
343
-
Thr
GGT
[SRA]
>SRA1042901
SRR035091.463660
454 Sequencing (SRP001812)
308
236
-
Thr
GGT
[SRA]
>SRA1044044
SRR035092.213963
454 Sequencing (SRP001813)
393
321
-
Thr
GGT
[SRA]
>SRA1047653
SRR035094.11326
454 Sequencing (SRP001815)
70
142
+
Thr
GGT
[SRA]
>SRA1048384
SRR035094.161941
454 Sequencing (SRP001815)
105
33
-
Thr
GGT
[SRA]
>SRA1049253
SRR035095.45762
454 Sequencing (SRP001816)
163
235
+
Thr
GGT
[SRA]
>SRA1049787
SRR035095.138470
454 Sequencing (SRP001816)
163
235
+
Thr
GGT
[SRA]
Identical group No.453741 (4 seq.)
>WENV170619091
FUWD012999189
[FUWD] metagenome; unknown
186
261
+
Thr
GGT
[ENA]
¢þ
>SRA1035669
SRR035089.351961
454 Sequencing (SRP001810)
70
145
+
Thr
GGT
[SRA]
>SRA1041670
SRR035091.277174
454 Sequencing (SRP001812)
211
286
+
Thr
GGT
[SRA]
>SRA1044575
SRR035092.304298
454 Sequencing (SRP001813)
498
422
-
Thr
GGT
[SRA]
Identical group No.547548 (8 seq.)
>WENV180273257
OBEQ012465095
[OBEQ] groundwater metagenome; groundwater
131
59
-
Thr
GGT
[ENA]
¢þ
>WENV183672861
ORJL011217575
[ORJL] groundwater metagenome; groundwater
3246
3174
-
Thr
GGT
[ENA]
¢þ
>WENV170600612
FUWD010135218
[FUWD] metagenome; unknown
346
271
-
Thr
GGT
[ENA]
¢þ
>SRA1036993
SRR035090.54552
454 Sequencing (SRP001811)
128
203
+
Thr
GGT
[SRA]
>SRA1040142
SRR035091.47340
454 Sequencing (SRP001812)
45
120
+
Thr
GGT
[SRA]
>SRA1041201
SRR035091.212781
454 Sequencing (SRP001812)
421
496
+
Thr
GGT
[SRA]
>SRA1044905
SRR035092.371051
454 Sequencing (SRP001813)
350
275
-
Thr
GGT
[SRA]
>SRA1050393
SRR035095.251378
454 Sequencing (SRP001816)
323
248
-
Thr
GGT
[SRA]
Identical group No.547699 (5 seq.)
>WENV170603384
FUWD010307131
[FUWD] metagenome; unknown
223
298
+
Thr
GGT
[ENA]
¢þ
>SRA1040630
SRR035091.124473
454 Sequencing (SRP001812)
126
201
+
Thr
GGT
[SRA]
>SRA1041592
SRR035091.266590
454 Sequencing (SRP001812)
437
362
-
Thr
GGT
[SRA]
>SRA1042675
SRR035091.428386
454 Sequencing (SRP001812)
154
79
-
Thr
GGT
[SRA]
>SRA1043319
SRR035092.95751
454 Sequencing (SRP001813)
440
365
-
Thr
GGT
[SRA]
Identical group No.547808 (5 seq.)
>WENV170605190
FUWD010457376
[FUWD] metagenome; unknown
444
519
+
Thr
GGT
[ENA]
¢þ
>SRA1042154
SRR035091.347289
454 Sequencing (SRP001812)
238
163
-
Thr
GGT
[SRA]
>SRA1044374
SRR035092.268856
454 Sequencing (SRP001813)
169
94
-
Thr
GGT
[SRA]
>SRA1049122
SRR035095.24178
454 Sequencing (SRP001816)
272
197
-
Thr
GGT
[SRA]
>SRA1049296
SRR035095.52859
454 Sequencing (SRP001816)
274
199
-
Thr
GGT
[SRA]
Identical group No.548300 (3 seq.)
>WENV170611690
FUWD012375878
[FUWD] metagenome; unknown
374
449
+
Thr
GGT
[ENA]
¢þ
>SRA1019615
SRR035082.489909
454 Sequencing (SRP001803)
377
452
+
Thr
GGT
[SRA]
>SRA1041064
SRR035091.190765
454 Sequencing (SRP001812)
263
338
+
Thr
GGT
[SRA]
Identical group No.548371 (2 seq.)
>WENV170612452
FUWD012613973
[FUWD] metagenome; unknown
354
279
-
Thr
GGT
[ENA]
¢þ
>SRA1040925
SRR035091.169960
454 Sequencing (SRP001812)
354
279
-
Thr
GGT
[SRA]
Identical group No.548381 (3 seq.)
>WENV170612506
FUWD012625859
[FUWD] metagenome; unknown
179
106
-
Thr
GGT
[ENA]
¢þ
>SRA1041886
SRR035091.310331
454 Sequencing (SRP001812)
184
111
-
Thr
GGT
[SRA]
>SRA1042696
SRR035091.431248
454 Sequencing (SRP001812)
77
150
+
Thr
GGT
[SRA]
Identical group No.548383 (3 seq.)
>W1711417239
MHEZ01000007
Unclassified
Omnitrophica bacterium GWA2_41_15 [MHEZ]
1307
1232
-
Thr
GGT
[ENA]
¡û
>WENV170612510
FUWD012626303
[FUWD] metagenome; unknown
122
47
-
Thr
GGT
[ENA]
¢þ
>SRA1041501
SRR035091.251304
454 Sequencing (SRP001812)
310
385
+
Thr
GGT
[SRA]
Identical group No.573459 (2 seq.)
>SRA1040051
SRR035091.26655
454 Sequencing (SRP001812)
435
360
-
Thr
GGT
[SRA]
>SRA1040338
SRR035091.80815
454 Sequencing (SRP001812)
433
357
-
Thr
GGT
[SRA]
Identical group No.573488 (2 seq.)
>SRA1040333
SRR035091.80325
454 Sequencing (SRP001812)
167
92
-
Thr
GGT
[SRA]
>SRA1040385
SRR035091.88081
454 Sequencing (SRP001812)
166
91
-
Thr
GGT
[SRA]
Identical group No.573497 (1 seq.)
>SRA1040501
SRR035091.106420
454 Sequencing (SRP001812)
533
458
-
Thr
GGT
[SRA]
Identical group No.573499 (2 seq.)
>SRA1022029
SRR035083.341315
454 Sequencing (SRP001804)
313
386
+
Thr
GGT
[SRA]
>SRA1040513
SRR035091.107857
454 Sequencing (SRP001812)
122
195
+
Thr
GGT
[SRA]
Identical group No.573532 (2 seq.)
>SRA1040806
SRR035091.152725
454 Sequencing (SRP001812)
93
18
-
Thr
GGT
[SRA]
>SRA1041158
SRR035091.207162
454 Sequencing (SRP001812)
93
18
-
Thr
GGT
[SRA]
Identical group No.573539 (1 seq.)
>SRA1040876
SRR035091.162426
454 Sequencing (SRP001812)
386
311
-
Thr
GGT
[SRA]
Identical group No.573564 (1 seq.)
>SRA1041139
SRR035091.203658
454 Sequencing (SRP001812)
48
123
+
Thr
GGT
[SRA]
Identical group No.573605 (1 seq.)
>SRA1041680
SRR035091.277747
454 Sequencing (SRP001812)
102
174
+
Thr
GGT
[SRA]
Identical group No.573609 (1 seq.)
>SRA1041728
SRR035091.283612
454 Sequencing (SRP001812)
144
71
-
Thr
GGT
[SRA]
Identical group No.573626 (1 seq.)
>SRA1041900
SRR035091.313087
454 Sequencing (SRP001812)
350
425
+
Thr
GGT
[SRA]
Identical group No.573632 (1 seq.)
>SRA1042002
SRR035091.326276
454 Sequencing (SRP001812)
358
285
-
Thr
GGT
[SRA]
Identical group No.573637 (1 seq.)
>SRA1042087
SRR035091.336096
454 Sequencing (SRP001812)
267
339
+
Thr
GGT
[SRA]
Identical group No.573651 (1 seq.)
>SRA1042273
SRR035091.365844
454 Sequencing (SRP001812)
438
364
-
Thr
GGT
[SRA]
Identical group No.573669 (1 seq.)
>SRA1042444
SRR035091.387384
454 Sequencing (SRP001812)
255
183
-
Thr
GGT
[SRA]
Identical group No.573674 (1 seq.)
>SRA1042517
SRR035091.400940
454 Sequencing (SRP001812)
365
289
-
Thr
GGT
[SRA]
Identical group No.573691 (1 seq.)
>SRA1042686
SRR035091.429650
454 Sequencing (SRP001812)
350
275
-
Thr
GGT
[SRA]
Identical group No.654587 (3 seq.)
>SRA1017623
SRR035082.169906
454 Sequencing (SRP001803)
102
174
+
Thr
GGT
[SRA]
>SRA1036017
SRR035089.427872
454 Sequencing (SRP001810)
285
357
+
Thr
GGT
[SRA]
>SRA1040101
SRR035091.38644
454 Sequencing (SRP001812)
118
190
+
Thr
GGT
[SRA]
Identical group No.654953 (268 seq.)
>W1710802927
LJYE01000075
Alphaproteobacteria
Bradyrhizobium pachyrhizi [LJYE]
5733
5659
-
Thr
GGT
[ENA]
¡û
>W1710802970
LJYF01000026
Alphaproteobacteria
Bradyrhizobium yuanmingense [LJYF]
301288
301214
-
Thr
GGT
[ENA]
¡û
>W1710803046
LJYG01000116
Alphaproteobacteria
Bradyrhizobium manausense [LJYG]
350491
350565
+
Thr
GGT
[ENA]
¡û
>W1710854931
LLXX01000060
Alphaproteobacteria
Bradyrhizobium valentinum [LLXX]
15920
15994
+
Thr
GGT
[ENA]
¡û
>W1710854994
LLXY01000173
Alphaproteobacteria
Bradyrhizobium valentinum [LLXY]
68124
68050
-
Thr
GGT
[ENA]
¡û
>W1710855055
LLXZ01000123
Alphaproteobacteria
Bradyrhizobium jicamae [LLXZ]
7364
7438
+
Thr
GGT
[ENA]
¡û
>W1710855110
LLYA01000168
Alphaproteobacteria
Bradyrhizobium retamae [LLYA]
17472
17546
+
Thr
GGT
[ENA]
¡û
>W1710855187
LLYB01000125
Alphaproteobacteria
Bradyrhizobium lablabi [LLYB]
64893
64819
-
Thr
GGT
[ENA]
¡û
>W1710861430
LMDP01000002
Alphaproteobacteria
Afipia sp. Root123D2 [LMDP]
1049162
1049236
+
Thr
GGT
[ENA]
¡û
>W1710877734
LMQJ01000006
Alphaproteobacteria
Bradyrhizobium sp. Leaf396 [LMQJ]
26017
26091
+
Thr
GGT
[ENA]
¡û
>W1710891427
LNCU01000107
Alphaproteobacteria
Bradyrhizobium macuxiense BR 10303 [LNCU]
233182
233108
-
Thr
GGT
[ENA]
¡û
>W1710892789
LNEC01000022
Alphaproteobacteria
Bradyrhizobiaceae bacterium Ga0074131 [LNEC]
220344
220270
-
Thr
GGT
[ENA]
¡û
>W1711072980
LSIC01000050
Alphaproteobacteria
Bradyrhizobium sp. CCH5-F6 [LSIC]
59937
59863
-
Thr
GGT
[ENA]
¡û
>W1711073367
LSIM01000099
Alphaproteobacteria
Bradyrhizobium sp. CCH4-A6 [LSIM]
49767
49841
+
Thr
GGT
[ENA]
¡û
>W1711073426
LSIN01000167
Alphaproteobacteria
Bradyrhizobium sp. CCH10-C7 [LSIN]
21211
21137
-
Thr
GGT
[ENA]
¡û
>W1711124808
LUKO01000171
Alphaproteobacteria
Bradyrhizobium liaoningense [LUKO]
528532
528606
+
Thr
GGT
[ENA]
¡û
>W1711138897
LVEM01000005
Alphaproteobacteria
Bradyrhizobium stylosanthis [LVEM]
497880
497806
-
Thr
GGT
[ENA]
¡û
>W1711169196
LVYV01000023
Alphaproteobacteria
Tardiphaga robiniae [LVYV]
211802
211728
-
Thr
GGT
[ENA]
¡û
>W1711180106
LWIG01000007
Alphaproteobacteria
Bradyrhizobium sacchari BR10280 [LWIG]
941219
941293
+
Thr
GGT
[ENA]
¡û
>W1711193167
LWUI01000067
Alphaproteobacteria
Bradyrhizobium elkanii [LWUI]
298266
298340
+
Thr
GGT
[ENA]
¡û
>W1711206728
LXEM01000014
Alphaproteobacteria
Bradyrhizobium elkanii [LXEM]
298272
298346
+
Thr
GGT
[ENA]
¡û
>W1711317173
MAXB01000053
Alphaproteobacteria
Bradyrhizobium paxllaeri [MAXB]
85868
85794
-
Thr
GGT
[ENA]
¡û
>W1711317205
MAXC01000004
Alphaproteobacteria
Bradyrhizobium sp. LMTR 3 [MAXC]
183165
183091
-
Thr
GGT
[ENA]
¡û
>W1711487067
MKFI01000006
Alphaproteobacteria
Bradyrhizobium mercantei SEMIA 6399 [MKFI]
32875
32949
+
Thr
GGT
[ENA]
¡û
>W1711501371
MKRN01000182
Alphaproteobacteria
Nitrobacter sp. 62-13 [MKRN]
32051
32125
+
Thr
GGT
[ENA]
¡û
>W1711502269
MKSM01000129
Alphaproteobacteria
Nitrobacter sp. 62-23 [MKSM]
11310
11236
-
Thr
GGT
[ENA]
¡û
>W1711504240
MKUJ01000005
Alphaproteobacteria
Afipia sp. 64-13 [MKUJ]
51210
51284
+
Thr
GGT
[ENA]
¡û
>W1711613034
MOXO01000420
Alphaproteobacteria
Bradyrhizobium elkanii [MOXO]
4052
3978
-
Thr
GGT
[ENA]
¡û
>W1711636745
MPVQ01000070
Alphaproteobacteria
Bradyrhizobium brasilense UFLA 03-321 [MPVQ]
3650
3724
+
Thr
GGT
[ENA]
¡û
>W1711795349
MWPQ01000004
Alphaproteobacteria
Nitrobacter vulgaris [MWPQ]
13099
13025
-
Thr
GGT
[ENA]
¡û
>W1711928275
NAEX01000136
Alphaproteobacteria
Bradyrhizobium canariense [NAEX]
16712
16786
+
Thr
GGT
[ENA]
¡û
>W1711928356
NAEY01000171
Alphaproteobacteria
Bradyrhizobium canariense [NAEY]
415484
415558
+
Thr
GGT
[ENA]
¡û
>W1711928400
NAEZ01000179
Alphaproteobacteria
Bradyrhizobium canariense [NAEZ]
2106
2032
-
Thr
GGT
[ENA]
¡û
>W1711928452
NAFA01000203
Alphaproteobacteria
Bradyrhizobium canariense [NAFA]
2106
2032
-
Thr
GGT
[ENA]
¡û
>W1711928466
NAFB01000144
Alphaproteobacteria
Bradyrhizobium canariense [NAFB]
61274
61348
+
Thr
GGT
[ENA]
¡û
>W1711928539
NAFC01000174
Alphaproteobacteria
Bradyrhizobium canariense [NAFC]
409351
409425
+
Thr
GGT
[ENA]
¡û
>W1711928579
NAFD01000187
Alphaproteobacteria
Bradyrhizobium canariense [NAFD]
147852
147926
+
Thr
GGT
[ENA]
¡û
>W1711928623
NAFE01000218
Alphaproteobacteria
Bradyrhizobium canariense [NAFE]
147852
147926
+
Thr
GGT
[ENA]
¡û
>W1711928672
NAFF01000107
Alphaproteobacteria
Bradyrhizobium canariense [NAFF]
147852
147926
+
Thr
GGT
[ENA]
¡û
>W1711928721
NAFG01000175
Alphaproteobacteria
Bradyrhizobium canariense [NAFG]
147852
147926
+
Thr
GGT
[ENA]
¡û
>W1711928769
NAFH01000171
Alphaproteobacteria
Bradyrhizobium canariense [NAFH]
147852
147926
+
Thr
GGT
[ENA]
¡û
>W1711928822
NAFI01000182
Alphaproteobacteria
Bradyrhizobium canariense [NAFI]
147852
147926
+
Thr
GGT
[ENA]
¡û
>W1711928857
NAFJ01000140
Alphaproteobacteria
Bradyrhizobium canariense [NAFJ]
46223
46297
+
Thr
GGT
[ENA]
¡û
>W1711928898
NAFK01000155
Alphaproteobacteria
Bradyrhizobium canariense [NAFK]
46223
46297
+
Thr
GGT
[ENA]
¡û
>W1711928945
NAFL01000245
Alphaproteobacteria
Bradyrhizobium japonicum [NAFL]
27930
27856
-
Thr
GGT
[ENA]
¡û
>W1712049598
NFUH01000116
Alphaproteobacteria
Bradyrhizobium guangdongense [NFUH]
22885
22959
+
Thr
GGT
[ENA]
¡û
>C171021128
CP013127
Alphaproteobacteria
Bradyrhizobium diazoefficiens USDA 122 [CP013127]
1419817
1419743
-
Thr
GGT
-
¡û
>C171064699
CP017637
Alphaproteobacteria
Bradyrhizobium japonicum J5 [CP017637]
1372131
1372057
-
Thr
GGT
-
¡û
>W131164072
ARAG01000002
Alphaproteobacteria
Bradyrhizobium elkanii USDA 76 [ARAG]
704354
704428
+
Thr
GGT
[ENA]
¡û
>W131164998
ARBF01000081
Alphaproteobacteria
Bradyrhizobium sp. WSM2793 WSM2793 [ARBF]
93120
93046
-
Thr
GGT
[ENA]
¡û
>W131167454
ARDH01000001
Alphaproteobacteria
Bradyrhizobium sp. WSM4349 WSM4349 [ARDH]
259216
259142
-
Thr
GGT
[ENA]
¡û
>W131170233
ARFJ01000006
Alphaproteobacteria
Bradyrhizobium japonicum USDA 124 [ARFJ]
72505
72431
-
Thr
GGT
[ENA]
¡û
>W131170234
ARFJ01000006
Alphaproteobacteria
Bradyrhizobium japonicum USDA 124 [ARFJ]
62554
62480
-
Thr
GGT
[ENA]
¡û
>W131217307
ATWP01000004
Alphaproteobacteria
Bradyrhizobium japonicum is5 [ATWP]
154943
155017
+
Thr
GGT
[ENA]
¡û
>W131226879
AUES01000005
Alphaproteobacteria
Bradyrhizobium sp. URHA0002 [AUES]
29302
29376
+
Thr
GGT
[ENA]
¡û
>W131228535
AUGA01000007
Alphaproteobacteria
Bradyrhizobium sp. th.b2 [AUGA]
235271
235345
+
Thr
GGT
[ENA]
¡û
>W131228686
AUGD01000004
Alphaproteobacteria
Bradyrhizobium japonicum in8p8 [AUGD]
280193
280119
-
Thr
GGT
[ENA]
¡û
>W131237407
AUOJ01000242
Alphaproteobacteria
Bradyrhizobium sp. JGI 0001002-A22 [AUOJ]
276981
277055
+
Thr
GGT
[ENA]
¡û
>C003086
BA000040
Alphaproteobacteria
Bradyrhizobium diazoefficiens USDA 110 USDA110 [BA000040]
1363162
1363088
-
Thr
GGT
[Ensembl]
¡û
>C014958
CP000319
Alphaproteobacteria
Nitrobacter hamburgensis X14 [CP000319]
315739
315665
-
Thr
GGT
[Ensembl]
¡û
>C018851
CP000463
Alphaproteobacteria
Rhodopseudomonas palustris [CP000463]
5031742
5031816
+
Thr
GGT
[Ensembl]
¡û
>W141001314
ADOU01000093
Alphaproteobacteria
Bradyrhizobium diazoefficiens SEMIA 5080 [ADOU]
39122
39196
+
Thr
GGT
[ENA]
¡û
>W141007461
AGWX01000005
Alphaproteobacteria
Afipia broomeae ATCC 49717 [AGWX]
271699
271773
+
Thr
GGT
[ENA]
¡û
>W141007509
AGWY01000013
Alphaproteobacteria
Afipia clevelandensis ATCC 49720 [AGWY]
326840
326766
-
Thr
GGT
[ENA]
¡û
>W141007532
AGWZ01000001
Alphaproteobacteria
Afipia felis ATCC 53690 [AGWZ]
2325965
2326039
+
Thr
GGT
[ENA]
¡û
>WENV180304090
OBJH01025692
[OBJH] soil metagenome; soil
176
250
+
Thr
GGT
[ENA]
¢þ
>WENV180304404
OBJI01028837
[OBJI] soil metagenome; soil
248
174
-
Thr
GGT
[ENA]
¢þ
>WENV180309235
OBJR01729164
[OBJR] soil metagenome; soil
88
14
-
Thr
GGT
[ENA]
¢þ
>WENV180344479
OBLL01005718
[OBLL] soil metagenome; soil
35
109
+
Thr
GGT
[ENA]
¢þ
>WENV180345104
OBLM01033321
[OBLM] soil metagenome; soil
127
53
-
Thr
GGT
[ENA]
¢þ
>WENV180396661
OBPV01049026
[OBPV] marine metagenome; ENVO:00002010
270
344
+
Thr
GGT
[ENA]
¢þ
>W141043052
AMFB01000017
Alphaproteobacteria
Bradyrhizobium sp. DFCI-1 [AMFB]
12200
12274
+
Thr
GGT
[ENA]
¡û
>W141063420
APHQ01000019
Alphaproteobacteria
Afipia sp. OHSU_II-uncloned [APHQ]
176203
176129
-
Thr
GGT
[ENA]
¡û
>W141063640
APJD01000003
Alphaproteobacteria
Bradyrhizobium sp. OHSU_III [APJD]
413683
413609
-
Thr
GGT
[ENA]
¡û
>W141063692
APJE01000001
Alphaproteobacteria
Afipia sp. OHSU_I-C6 [APJE]
62520
62594
+
Thr
GGT
[ENA]
¡û
>W141063778
APJF01000022
Alphaproteobacteria
Afipia sp. OHSU_I-C4 [APJF]
176203
176129
-
Thr
GGT
[ENA]
¡û
>W141063804
APJG01000013
Alphaproteobacteria
Afipia sp. OHSU_I-uncloned [APJG]
62520
62594
+
Thr
GGT
[ENA]
¡û
>W141063833
APJH01000005
Alphaproteobacteria
Afipia sp. OHSU_II-C2 [APJH]
67987
68061
+
Thr
GGT
[ENA]
¡û
>W141063905
APJI01000015
Alphaproteobacteria
Afipia sp. OHSU_II-C1 [APJI]
67988
68062
+
Thr
GGT
[ENA]
¡û
>WENV180695003
OCZS012906804
[OCZS] soil metagenome; soil
63
137
+
Thr
GGT
[ENA]
¢þ
>W141093604
AVBK01000017
Alphaproteobacteria
Afipia sp. NBIMC_P1-C1 [AVBK]
93484
93558
+
Thr
GGT
[ENA]
¡û
>W141093642
AVBL01000011
Alphaproteobacteria
Afipia sp. NBIMC_P1-C2 [AVBL]
52174
52100
-
Thr
GGT
[ENA]
¡û
>W141093686
AVBM01000004
Alphaproteobacteria
Afipia sp. NBIMC_P1-C3 [AVBM]
496372
496446
+
Thr
GGT
[ENA]
¡û
>WENV181032170
ODXK01080233
[ODXK] human metagenome; G_DNA_Stool
118
44
-
Thr
GGT
[ENA]
¢þ
>WENV181164154
OEIR01036975
[OEIR] soil metagenome; soil
391
317
-
Thr
GGT
[ENA]
¢þ
>WENV181166775
OEIU01002022
[OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
5610
5536
-
Thr
GGT
[ENA]
¢þ
>WENV181374950
OFQY01034307
[OFQY] wastewater metagenome; Exp Tend VB 10WW
470
396
-
Thr
GGT
[ENA]
¢þ
>WENV181379653
OFRD01005164
[OFRD] wastewater metagenome; Exp Tend CN 100WW
2318
2392
+
Thr
GGT
[ENA]
¢þ
>WENV181384030
OFRH01008249
[OFRH] wastewater metagenome; Exp Tend NO 100WW
1349
1275
-
Thr
GGT
[ENA]
¢þ
>WENV181384791
OFRI01010673
[OFRI] wastewater metagenome; Exp Tend VB 90WW
493
567
+
Thr
GGT
[ENA]
¢þ
>WENV181386191
OFRL01001172
[OFRL] wastewater metagenome; Lake Maggiore Cannobio
815
741
-
Thr
GGT
[ENA]
¢þ
>WENV181400344
OFSF01004771
[OFSF] wastewater metagenome; Exp Tend VB 100WW
2318
2392
+
Thr
GGT
[ENA]
¢þ
>W141150016
AXAB01000001
Alphaproteobacteria
Bradyrhizobium sp. WSM2254 [AXAB]
485290
485216
-
Thr
GGT
[ENA]
¡û
>W141150131
AXAD01000007
Alphaproteobacteria
Bradyrhizobium arachidis USDA 3384 [AXAD]
242017
242091
+
Thr
GGT
[ENA]
¡û
>W141150226
AXAF01000008
Alphaproteobacteria
Bradyrhizobium ottawaense USDA 4 [AXAF]
241042
241116
+
Thr
GGT
[ENA]
¡û
>W141150291
AXAG01000020
Alphaproteobacteria
Bradyrhizobium japonicum USDA 38 [AXAG]
65121
65047
-
Thr
GGT
[ENA]
¡û
>W141150318
AXAH01000007
Alphaproteobacteria
Bradyrhizobium elkanii USDA 3254 [AXAH]
117925
117851
-
Thr
GGT
[ENA]
¡û
>W141151032
AXAT01000004
Alphaproteobacteria
Bradyrhizobium japonicum USDA 135 [AXAT]
23313
23387
+
Thr
GGT
[ENA]
¡û
>W141151100
AXAU01000005
Alphaproteobacteria
Bradyrhizobium murdochi WSM1741 [AXAU]
160414
160340
-
Thr
GGT
[ENA]
¡û
>W141151150
AXAV01000017
Alphaproteobacteria
Bradyrhizobium japonicum USDA 6 [AXAV]
185393
185467
+
Thr
GGT
[ENA]
¡û
>W141151182
AXAW01000006
Alphaproteobacteria
Bradyrhizobium elkanii USDA 3259 [AXAW]
249760
249834
+
Thr
GGT
[ENA]
¡û
>W141151234
AXAX01000007
Alphaproteobacteria
Bradyrhizobium diazoefficiens USDA 122 [AXAX]
322136
322210
+
Thr
GGT
[ENA]
¡û
>W141151274
AXAY01000004
Alphaproteobacteria
Bradyrhizobium sp. WSM3983 [AXAY]
314845
314919
+
Thr
GGT
[ENA]
¡û
>W141151351
AXAZ01000083
Alphaproteobacteria
Bradyrhizobium sp. WSM1743 [AXAZ]
891
817
-
Thr
GGT
[ENA]
¡û
>W141151482
AXBC01000007
Alphaproteobacteria
Bradyrhizobium genosp. SA-4 SA-4 str. CB756 [AXBC]
242189
242263
+
Thr
GGT
[ENA]
¡û
>W141168852
AXVG01000021
Alphaproteobacteria
Bradyrhizobium japonicum 22 [AXVG]
178208
178282
+
Thr
GGT
[ENA]
¡û
>W141169213
AXVP01000071
Alphaproteobacteria
Bradyrhizobium japonicum USDA 123 [AXVP]
28060
27986
-
Thr
GGT
[ENA]
¡û
>W08007858
ABKN01000001
Alphaproteobacteria
Afipia carboxidovorans OM5 [ABKN]
714736
714665
-
Thr
GGT
[ENA]
¡û
>W141194147
AYSU01000018
Alphaproteobacteria
Rhodopseudomonas palustris JSC-3b [AYSU]
99635
99709
+
Thr
GGT
[ENA]
¡û
>W141220394
AZXU01000001
Alphaproteobacteria
Bradyrhizobium sp. WSM1417 [AZXU]
260340
260414
+
Thr
GGT
[ENA]
¡û
>W141233864
BAWE01000002
Alphaproteobacteria
Bradyrhizobium sp. DOA9 [BAWE]
553773
553847
+
Thr
GGT
[ENA]
¡û
>W141243583
CAJQ02000003
Alphaproteobacteria
Afipia birgiae 34632 [CAJQ]
86585
86511
-
Thr
GGT
[ENA]
¡û
>W141261733
CCAZ010000235
Alphaproteobacteria
Afipia felis [CCAZ]
49190
49264
+
Thr
GGT
[ENA]
¡û
>W141275930
JADK01000003
Alphaproteobacteria
Bradyrhizobium sp. URHA0013 [JADK]
645692
645766
+
Thr
GGT
[ENA]
¡û
>W141278092
JAFC01000007
Alphaproteobacteria
Bradyrhizobium elkanii USDA 94 [JAFC]
39377
39451
+
Thr
GGT
[ENA]
¡û
>WENV183665470
ORJL010465512
[ORJL] groundwater metagenome; groundwater
572
498
-
Thr
GGT
[ENA]
¢þ
>WENV183714009
PDWI01163615
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
766
840
+
Thr
GGT
[ENA]
¢þ
>WENV183724227
PJQE01002186
[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
606
532
-
Thr
GGT
[ENA]
¢þ
>WENV183725796
PJQF01017831
[PJQF] biofilm metagenome; biomolecule (vanillin) treated reverse osmosis membrane biofilm
297
371
+
Thr
GGT
[ENA]
¢þ
>WENV183745141
PJUL01003031
[PJUL] feces metagenome; Chicken feces enriched on filter paper
3009
2935
-
Thr
GGT
[ENA]
¢þ
>WENV170132831
CENT01141097
[CENT] marine metagenome genome assembly TARA_007_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
204
130
-
Thr
GGT
[ENA]
¢þ
>WENV170324196
CESS01059969
[CESS] marine metagenome genome assembly TARA_023_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
311
385
+
Thr
GGT
[ENA]
¢þ
>WENV170705620
LNAP01000024
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
13417
13491
+
Thr
GGT
[ENA]
¢þ
>WENV170706081
LNAP01001046
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
978
1052
+
Thr
GGT
[ENA]
¢þ
>WENV170706434
LNAP01003131
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
10017
10091
+
Thr
GGT
[ENA]
¢þ
>WENV170709561
LNFM01000470
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
280091
280017
-
Thr
GGT
[ENA]
¢þ
>WENV170710066
LNFM01001116
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
27021
26947
-
Thr
GGT
[ENA]
¢þ
>WENV170711075
LNFM01003439
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
5066
5140
+
Thr
GGT
[ENA]
¢þ
>WENV170974878
MTKY01079185
[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
257
183
-
Thr
GGT
[ENA]
¢þ
>W09102991
AAIS01000001
Alphaproteobacteria
Nitrobacter hamburgensis X14 [AAIS]
1176512
1176438
-
Thr
GGT
[ENA]
¡û
>W09103898
AALA01000029
Alphaproteobacteria
Rhodopseudomonas palustris BisA53 [AALA]
39621
39547
-
Thr
GGT
[ENA]
¡û
>C181113204
CP025113
Alphaproteobacteria
Bradyrhizobium sp. SK17 [CP025113]
2232880
2232806
-
Thr
GGT
-
¡û
>C181178132
CP029425
Alphaproteobacteria
Bradyrhizobium ottawaense OO99 [CP029425]
1646538
1646612
+
Thr
GGT
-
¡û
>C181178195
CP029426
Alphaproteobacteria
Bradyrhizobium amphicarpaeae 39S1MB [CP029426]
6195235
6195309
+
Thr
GGT
-
¡û
>C181178239
CP029427
Alphaproteobacteria
Bradyrhizobium symbiodeficiens 85S1MB [CP029427]
5910613
5910687
+
Thr
GGT
-
¡û
>C181181588
CP029603
Alphaproteobacteria
Bradyrhizobium diazoefficiens XF7 [CP029603]
1475493
1475419
-
Thr
GGT
-
¡û
>C181203860
LS398110
Alphaproteobacteria
Bradyrhizobium vignae [LS398110]
7693144
7693218
+
Thr
GGT
-
¡û
>C191019691
CP022219
Alphaproteobacteria
Bradyrhizobium guangxiense CCBAU 53363 [CP022219]
6164278
6164352
+
Thr
GGT
-
¡û
>C191071699
CP030051
Alphaproteobacteria
Bradyrhizobium guangdongense CCBAU 51649 [CP030051]
1033214
1033140
-
Thr
GGT
-
¡û
>C191071745
CP030053
Alphaproteobacteria
Bradyrhizobium guangzhouense CCBAU 51670 [CP030053]
1077886
1077812
-
Thr
GGT
-
¡û
>C191092056
CP032617
Alphaproteobacteria
Bradyrhizobium diazoefficiens 110spc4 [CP032617]
1293860
1293786
-
Thr
GGT
-
¡û
>C191186635
CP041090
Alphaproteobacteria
Bradyrhizobium symbiodeficiens 65S1MB [CP041090]
5220547
5220621
+
Thr
GGT
-
¡û
>W141730462
JNIJ01000010
Alphaproteobacteria
Bradyrhizobium sp. URHD0069 [JNIJ]
39563
39637
+
Thr
GGT
[ENA]
¡û
>W1910182855
BJNF01000070
Alphaproteobacteria
Nitrobacter winogradskyi NBRC 14297 [BJNF]
3512
3586
+
Thr
GGT
[ENA]
¡û
>W1910183086
BJNK01000014
Alphaproteobacteria
Bradyrhizobium japonicum NBRC 14783 [BJNK]
27157
27083
-
Thr
GGT
[ENA]
¡û
>W1910183143
BJNL01000067
Alphaproteobacteria
Bradyrhizobium elkanii NBRC 14791 [BJNL]
24659
24733
+
Thr
GGT
[ENA]
¡û
>W1910548968
FZOX01000004
Alphaproteobacteria
Tardiphaga sp. OK246 [FZOX]
500713
500639
-
Thr
GGT
[ENA]
¡û
>W1910568909
JHAA01000027
Alphaproteobacteria
Rhodopseudomonas palustris PSBS [JHAA]
151847
151773
-
Thr
GGT
[ENA]
¡û
>W1910598252
LAXE01000001
Alphaproteobacteria
Bradyrhizobium sp. SUTN9-2 [LAXE]
7845351
7845425
+
Thr
GGT
[ENA]
¡û
>W1910598967
LBJC01000080
Alphaproteobacteria
Bradyrhizobium nanningense CCBAU 53390 [LBJC]
97501
97427
-
Thr
GGT
[ENA]
¡û
>W1910599038
LBJQ01000079
Alphaproteobacteria
Bradyrhizobium nanningense CCBAU 51757 [LBJQ]
97482
97408
-
Thr
GGT
[ENA]
¡û
>W1910611580
LFJC01000003
Alphaproteobacteria
Bradyrhizobium nitroreducens TSA1 [LFJC]
577209
577135
-
Thr
GGT
[ENA]
¡û
>W1910693436
MDEP01000033
Alphaproteobacteria
Bradyrhizobium sp. UASWS1016 [MDEP]
3645
3719
+
Thr
GGT
[ENA]
¡û
>W1910840264
MZXW01000016
Alphaproteobacteria
Bradyrhizobium betae Opo-243 [MZXW]
942919
942845
-
Thr
GGT
[ENA]
¡û
>C09108157
CP001196
Alphaproteobacteria
Afipia carboxidovorans OM5 OM5; ATCC 49405 [CP001196]
714422
714348
-
Thr
GGT
-
¡û
>W1911245257
NSJY01000003
Alphaproteobacteria
Bradyrhizobium sp. UFLA03-84 [NSJY]
450703
450777
+
Thr
GGT
[ENA]
¡û
>W1911409787
NWTE01000009
Alphaproteobacteria
Bradyrhizobium diazoefficiens Y21 [NWTE]
311785
311859
+
Thr
GGT
[ENA]
¡û
>W1911409856
NWTF01000023
Alphaproteobacteria
Bradyrhizobium ottawaense L2 [NWTF]
22549
22475
-
Thr
GGT
[ENA]
¡û
>W1911409910
NWTG01000011
Alphaproteobacteria
Bradyrhizobium sp. C9 [NWTG]
256227
256301
+
Thr
GGT
[ENA]
¡û
>W1911410009
NWTI01000014
Alphaproteobacteria
Bradyrhizobium sp. Y36 [NWTI]
64375
64301
-
Thr
GGT
[ENA]
¡û
>W1911817885
QZMV01000012
Alphaproteobacteria
Bradyrhizobium sp. LVM 105 [QZMV]
174782
174708
-
Thr
GGT
[ENA]
¡û
>SRA1002214
SRR001308.307791
Metagenomic characterization of a wastewater treatment plant (SRP000180)
135
209
+
Thr
GGT
[SRA]
>W1810089300
PGEQ01000001
Alphaproteobacteria
Bradyrhizobium lablabi GAS165 [PGEQ]
768045
767971
-
Thr
GGT
[ENA]
¡û
>W1810089629
PGEV01000001
Alphaproteobacteria
Afipia broomeae GAS525 [PGEV]
5114533
5114607
+
Thr
GGT
[ENA]
¡û
>W1810104412
PGVG01000008
Alphaproteobacteria
Bradyrhizobium forestalis INPA54B [PGVG]
3520
3446
-
Thr
GGT
[ENA]
¡û
>W1810289867
PTFE01000038
Alphaproteobacteria
Bradyrhizobium sp. AC87j1 [PTFE]
16200
16274
+
Thr
GGT
[ENA]
¡û
>W1810367871
PVYZ01000010
Alphaproteobacteria
Rhizobium tropici NFR14 [PVYZ]
8796
8870
+
Thr
GGT
[ENA]
¡û
>W1810395526
PYCM01000133
Alphaproteobacteria
Bradyrhizobium algeriense RST89 [PYCM]
292
366
+
Thr
GGT
[ENA]
¡û
>W1810395601
PYCN01000004
Alphaproteobacteria
Bradyrhizobium algeriense RST91 [PYCN]
366199
366273
+
Thr
GGT
[ENA]
¡û
>W1810400095
PYFV01000003
Alphaproteobacteria
Bradyrhizobium sp. MOS004 [PYFV]
482954
482880
-
Thr
GGT
[ENA]
¡û
>W1810400140
PYFW01000001
Alphaproteobacteria
Bradyrhizobium sp. MOS003 [PYFW]
919047
918973
-
Thr
GGT
[ENA]
¡û
>W1810400180
PYFX01000001
Alphaproteobacteria
Bradyrhizobium sp. MOS002 [PYFX]
553335
553409
+
Thr
GGT
[ENA]
¡û
>W1810576963
QENW01000009
Alphaproteobacteria
Tardiphaga sp. OV697 [QENW]
154616
154542
-
Thr
GGT
[ENA]
¡û
>W1810672300
QJTI01000004
Alphaproteobacteria
Rhodopseudomonas faecalis JCM 11668 [QJTI]
134809
134883
+
Thr
GGT
[ENA]
¡û
>W1810784358
QRAQ01000001
Alphaproteobacteria
Tardiphaga sp. CF115 [QRAQ]
2133827
2133901
+
Thr
GGT
[ENA]
¡û
>SRA1016040
SRR023846.320228
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
167
241
+
Thr
GGT
[SRA]
>C151066565
CP010313
Alphaproteobacteria
Bradyrhizobium japonicum E109 [CP010313]
1419271
1419197
-
Thr
GGT
[Ensembl]
¡û
>SRA1041904
SRR035091.313899
454 Sequencing (SRP001812)
339
265
-
Thr
GGT
[SRA]
>W10119576
ADVZ01000003
Alphaproteobacteria
Afipia sp. 1NLS2 [ADVZ]
130180
130106
-
Thr
GGT
[ENA]
¡û
>C11116267
CP002821
Alphaproteobacteria
Afipia carboxidovorans OM4 [CP002821]
3353737
3353811
+
Thr
GGT
[Ensembl]
¡û
>W1510973708
JGCL01000002
Alphaproteobacteria
Bradyrhizobium japonicum FN1 [JGCL]
860466
860540
+
Thr
GGT
[ENA]
¡û
>W1511353619
JRPN01000018
Alphaproteobacteria
Bradyrhizobium japonicum Is-34 [JRPN]
153089
153163
+
Thr
GGT
[ENA]
¡û
>W11125842
ADVZ01000003
Alphaproteobacteria
Afipia sp. 1NLS2 [ADVZ]
130180
130106
-
Thr
GGT
[ENA]
¡û
>W1511507996
JXOF01000180
Alphaproteobacteria
Bradyrhizobium elkanii UASWS1015 [JXOF]
77176
77102
-
Thr
GGT
[ENA]
¡û
>W1511533251
JYMR01000004
Alphaproteobacteria
Bradyrhizobium sp. LTSP849 [JYMR]
282743
282817
+
Thr
GGT
[ENA]
¡û
>W1511533303
JYMS01000019
Alphaproteobacteria
Bradyrhizobium sp. LTSP857 [JYMS]
26527
26453
-
Thr
GGT
[ENA]
¡û
>W1511533388
JYMT01000043
Alphaproteobacteria
Bradyrhizobium sp. LTSP885 [JYMT]
238365
238291
-
Thr
GGT
[ENA]
¡û
>W1511533430
JYMU01000049
Alphaproteobacteria
Bradyrhizobium sp. LTSPM299 [JYMU]
84326
84252
-
Thr
GGT
[ENA]
¡û
>W1511591992
LBIA01000001
Alphaproteobacteria
Afipia massiliensis LC387 [LBIA]
2810911
2810837
-
Thr
GGT
[ENA]
¡û
>W1511681424
LFIP01000071
Alphaproteobacteria
Bradyrhizobium embrapense SEMIA 6208 [LFIP]
20709
20635
-
Thr
GGT
[ENA]
¡û
>W1511681449
LFIQ01000020
Alphaproteobacteria
Bradyrhizobium pachyrhizi PAC 48 [LFIQ]
46395
46469
+
Thr
GGT
[ENA]
¡û
>W1511684036
LFLZ01000035
Alphaproteobacteria
Bradyrhizobium tropiciagri SEMIA 6148 [LFLZ]
2540
2466
-
Thr
GGT
[ENA]
¡û
>W1511706008
LGTB01000034
Alphaproteobacteria
Bradyrhizobium viridifuturi SEMIA 690 [LGTB]
93069
92995
-
Thr
GGT
[ENA]
¡û
>W1511706711
LGUJ01000015
Alphaproteobacteria
Bradyrhizobium diazoefficiens Is-1 [LGUJ]
93597
93523
-
Thr
GGT
[ENA]
¡û
>W11168437
AFOF01000015
Alphaproteobacteria
Bradyrhizobiaceae bacterium SG-6C [AFOF]
240965
240891
-
Thr
GGT
[ENA]
¡û
>C121000495
AP012206
Alphaproteobacteria
Bradyrhizobium japonicum USDA 6 [AP012206]
1398858
1398784
-
Thr
GGT
[Ensembl]
¡û
>C121000728
AP012279
Alphaproteobacteria
Bradyrhizobium cosmicum S23321 [AP012279]
6791491
6791565
+
Thr
GGT
[Ensembl]
¡û
>C121002987
CP002826
Alphaproteobacteria
Afipia carboxidovorans OM5 [CP002826]
3410035
3410109
+
Thr
GGT
-
¡û
>C161001016
AP014685
Alphaproteobacteria
Bradyrhizobium diazoefficiens NK6 [AP014685]
3096018
3096092
+
Thr
GGT
-
¡û
>C161034264
CP011360
Alphaproteobacteria
Bradyrhizobium diazoefficiens USDA 110 [CP011360]
682556
682482
-
Thr
GGT
-
¡û
>C161097223
CP016428
Alphaproteobacteria
Bradyrhizobium icense LMTR 13 [CP016428]
637639
637565
-
Thr
GGT
[Ensembl]
¡û
>C161107831
LN901633
Alphaproteobacteria
Bradyrhizobium sp. [LN901633]
3381596
3381670
+
Thr
GGT
-
¡û
>C161107833
LN901633
Alphaproteobacteria
Bradyrhizobium sp. [LN901633]
3547964
3548038
+
Thr
GGT
-
¡û
>C161107933
LN907826
Alphaproteobacteria
Bradyrhizobium sp. [LN907826]
8910688
8910762
+
Thr
GGT
-
¡û
>W121036223
AHLW01000002
Alphaproteobacteria
Bradyrhizobium sp. WSM471 [AHLW]
750315
750389
+
Thr
GGT
[ENA]
¡û
>W121036429
AHMB01000041
Alphaproteobacteria
Bradyrhizobium sp. WSM1253 [AHMB]
247372
247446
+
Thr
GGT
[ENA]
¡û
>W121062476
AJJK01002382
Alphaproteobacteria
Bradyrhizobium elkanii 587 [AJJK]
3696
3770
+
Thr
GGT
[ENA]
¡û
>W121065198
AJPV01000202
Alphaproteobacteria
Bradyrhizobium elkanii CCBAU 05737 [AJPV]
425
499
+
Thr
GGT
[ENA]
¡û
>W121065241
AJPW01000107
Alphaproteobacteria
Bradyrhizobium elkanii CCBAU 43297 [AJPW]
4318
4244
-
Thr
GGT
[ENA]
¡û
>W121065288
AJPX01000144
Alphaproteobacteria
Bradyrhizobium japonicum CCBAU 15354 [AJPX]
1998
1924
-
Thr
GGT
[ENA]
¡û
>W121065349
AJPY01000415
Alphaproteobacteria
Bradyrhizobium japonicum CCBAU 15517 [AJPY]
28131
28057
-
Thr
GGT
[ENA]
¡û
>W121065393
AJPZ01000302
Alphaproteobacteria
Bradyrhizobium japonicum CCBAU 15618 [AJPZ]
4547
4621
+
Thr
GGT
[ENA]
¡û
>W121065435
AJQA01000153
Alphaproteobacteria
Bradyrhizobium japonicum CCBAU 25435 [AJQA]
4648
4722
+
Thr
GGT
[ENA]
¡û
>W121065496
AJQB01000449
Alphaproteobacteria
Bradyrhizobium japonicum CCBAU 83623 [AJQB]
4681
4607
-
Thr
GGT
[ENA]
¡û
>W121065531
AJQC01000330
Alphaproteobacteria
Bradyrhizobium liaoningense CCBAU 05525 [AJQC]
31248
31322
+
Thr
GGT
[ENA]
¡û
>W121065566
AJQD01000014
Alphaproteobacteria
Bradyrhizobium liaoningense CCBAU 83689 [AJQD]
12496
12422
-
Thr
GGT
[ENA]
¡û
>W121065627
AJQE01000168
Alphaproteobacteria
Bradyrhizobium sp. CCBAU 43298 [AJQE]
27230
27156
-
Thr
GGT
[ENA]
¡û
>W121065694
AJQF01000429
Alphaproteobacteria
Bradyrhizobium sp. CCBAU 15544 [AJQF]
17466
17392
-
Thr
GGT
[ENA]
¡û
>W121065731
AJQG01000238
Alphaproteobacteria
Bradyrhizobium sp. CCBAU 15615 [AJQG]
53730
53656
-
Thr
GGT
[ENA]
¡û
>W121065770
AJQH01000195
Alphaproteobacteria
Bradyrhizobium sp. CCBAU 15635 [AJQH]
5780
5854
+
Thr
GGT
[ENA]
¡û
>W121065804
AJQI01000047
Alphaproteobacteria
Bradyrhizobium diazoefficiens CCBAU 41267 [AJQI]
46775
46701
-
Thr
GGT
[ENA]
¡û
>W121065867
AJQJ01000207
Alphaproteobacteria
Bradyrhizobium yuanmingense CCBAU 05623 [AJQJ]
25331
25257
-
Thr
GGT
[ENA]
¡û
>W121065919
AJQK01000215
Alphaproteobacteria
Bradyrhizobium yuanmingense CCBAU 25021 [AJQK]
12588
12514
-
Thr
GGT
[ENA]
¡û
>W121065978
AJQL01000389
Alphaproteobacteria
Bradyrhizobium yuanmingense CCBAU 35157 [AJQL]
3685
3759
+
Thr
GGT
[ENA]
¡û
>W121085053
AKIY01000009
Alphaproteobacteria
Bradyrhizobium sp. YR681 [AKIY]
7088
7162
+
Thr
GGT
[ENA]
¡û
>W1610049395
BBEX01000338
Alphaproteobacteria
Bradyrhizobium sp. 17-4 [BBEX]
4079
4005
-
Thr
GGT
[ENA]
¡û
>W1610514434
FMAE01000006
Alphaproteobacteria
Bradyrhizobium yuanmingense [FMAE]
236402
236476
+
Thr
GGT
[ENA]
¡û
>W1610514595
FMAI01000003
Alphaproteobacteria
Bradyrhizobium shewense err11 [FMAI]
131705
131631
-
Thr
GGT
[ENA]
¡û
>W1610549151
JXDL01000001
Alphaproteobacteria
Bradyrhizobium sp. AT1 [JXDL]
5764877
5764803
-
Thr
GGT
[ENA]
¡û
>W1610666784
LJYE01000075
Alphaproteobacteria
Bradyrhizobium pachyrhizi [LJYE]
5733
5659
-
Thr
GGT
[ENA]
¡û
>W1610666827
LJYF01000026
Alphaproteobacteria
Bradyrhizobium yuanmingense [LJYF]
301288
301214
-
Thr
GGT
[ENA]
¡û
>W1610666903
LJYG01000116
Alphaproteobacteria
Bradyrhizobium manausense [LJYG]
350491
350565
+
Thr
GGT
[ENA]
¡û
>W1610717272
LLXX01000060
Alphaproteobacteria
Bradyrhizobium valentinum [LLXX]
15920
15994
+
Thr
GGT
[ENA]
¡û
>W1610717335
LLXY01000173
Alphaproteobacteria
Bradyrhizobium valentinum [LLXY]
68124
68050
-
Thr
GGT
[ENA]
¡û
>W1610717396
LLXZ01000123
Alphaproteobacteria
Bradyrhizobium jicamae [LLXZ]
7364
7438
+
Thr
GGT
[ENA]
¡û
>W1610717451
LLYA01000168
Alphaproteobacteria
Bradyrhizobium retamae [LLYA]
17472
17546
+
Thr
GGT
[ENA]
¡û
>W1610717528
LLYB01000125
Alphaproteobacteria
Bradyrhizobium lablabi [LLYB]
64893
64819
-
Thr
GGT
[ENA]
¡û
>W1610723776
LMDP01000002
Alphaproteobacteria
Afipia sp. Root123D2 [LMDP]
1049162
1049236
+
Thr
GGT
[ENA]
¡û
>W1610740080
LMQJ01000006
Alphaproteobacteria
Bradyrhizobium sp. Leaf396 [LMQJ]
26017
26091
+
Thr
GGT
[ENA]
¡û
>W1610751792
LNCU01000107
Alphaproteobacteria
Bradyrhizobium macuxiense BR 10303 [LNCU]
233182
233108
-
Thr
GGT
[ENA]
¡û
>W1610753055
LNEC01000022
Alphaproteobacteria
Bradyrhizobiaceae bacterium Ga0074131 [LNEC]
220344
220270
-
Thr
GGT
[ENA]
¡û
>W1610912240
LSIC01000050
Alphaproteobacteria
Bradyrhizobium sp. CCH5-F6 [LSIC]
59937
59863
-
Thr
GGT
[ENA]
¡û
>W1610912672
LSIM01000099
Alphaproteobacteria
Bradyrhizobium sp. CCH4-A6 [LSIM]
49767
49841
+
Thr
GGT
[ENA]
¡û
>W1610912731
LSIN01000167
Alphaproteobacteria
Bradyrhizobium sp. CCH10-C7 [LSIN]
21211
21137
-
Thr
GGT
[ENA]
¡û
>W1610935780
LUKO01000171
Alphaproteobacteria
Bradyrhizobium liaoningense [LUKO]
528532
528606
+
Thr
GGT
[ENA]
¡û
>W1610949905
LVEM01000005
Alphaproteobacteria
Bradyrhizobium stylosanthis [LVEM]
497880
497806
-
Thr
GGT
[ENA]
¡û
>W1610978991
LVYV01000023
Alphaproteobacteria
Tardiphaga robiniae [LVYV]
211802
211728
-
Thr
GGT
[ENA]
¡û
>W1611061243
MAXB01000053
Alphaproteobacteria
Bradyrhizobium paxllaeri [MAXB]
85868
85794
-
Thr
GGT
[ENA]
¡û
>W1611061275
MAXC01000004
Alphaproteobacteria
Bradyrhizobium sp. LMTR 3 [MAXC]
183165
183091
-
Thr
GGT
[ENA]
¡û
>W1710045794
BBEX01000338
Alphaproteobacteria
Bradyrhizobium sp. 17-4 [BBEX]
4079
4005
-
Thr
GGT
[ENA]
¡û
>W1710500124
FMAE01000006
Alphaproteobacteria
Bradyrhizobium yuanmingense [FMAE]
236402
236476
+
Thr
GGT
[ENA]
¡û
>W1710500285
FMAI01000003
Alphaproteobacteria
Bradyrhizobium shewense err11 [FMAI]
131705
131631
-
Thr
GGT
[ENA]
¡û
>W1710513042
FMZW01000004
Alphaproteobacteria
Bradyrhizobium brasilense R5 [FMZW]
26275
26201
-
Thr
GGT
[ENA]
¡û
>W1710536591
FNTH01000001
Alphaproteobacteria
Bradyrhizobium erythrophlei [FNTH]
6190037
6189963
-
Thr
GGT
[ENA]
¡û
>W1710536642
FNTI01000001
Alphaproteobacteria
Bradyrhizobium lablabi [FNTI]
4292591
4292517
-
Thr
GGT
[ENA]
¡û
>W1710540647
FNWZ01000001
Alphaproteobacteria
Tardiphaga sp. OK245 [FNWZ]
975196
975270
+
Thr
GGT
[ENA]
¡û
>W1710546000
FOBX01000004
Alphaproteobacteria
Bradyrhizobium sp. OK095 [FOBX]
377641
377567
-
Thr
GGT
[ENA]
¡û
>W1710564266
FOQJ01000003
Alphaproteobacteria
Bradyrhizobium sp. cf659 [FOQJ]
427351
427277
-
Thr
GGT
[ENA]
¡û
>W1710564414
FOQM01000002
Alphaproteobacteria
Bradyrhizobium sp. Gha [FOQM]
111385
111311
-
Thr
GGT
[ENA]
¡û
>W1710568428
FOTP01000003
Alphaproteobacteria
Bradyrhizobium sp. NFR13 [FOTP]
384389
384463
+
Thr
GGT
[ENA]
¡û
>W1710569796
FOUS01000004
Alphaproteobacteria
Bradyrhizobium sp. Rc3b [FOUS]
16845
16771
-
Thr
GGT
[ENA]
¡û
>W1710571297
FOVU01000003
Alphaproteobacteria
Bradyrhizobium sp. Ghvi [FOVU]
378368
378442
+
Thr
GGT
[ENA]
¡û
>W1710578533
FPBQ01000025
Alphaproteobacteria
Bradyrhizobium arachidis [FPBQ]
35584
35510
-
Thr
GGT
[ENA]
¡û
>W1710594241
FSRD01000001
Alphaproteobacteria
Bradyrhizobium erythrophlei [FSRD]
525526
525600
+
Thr
GGT
[ENA]
¡û
>W1710652725
JXDL01000001
Alphaproteobacteria
Bradyrhizobium sp. AT1 [JXDL]
5764877
5764803
-
Thr
GGT
[ENA]
¡û
>W1710735596
LGHK01000125
Alphaproteobacteria
Bradyrhizobium sp. NAS96.2 [LGHK]
35438
35364
-
Thr
GGT
[ENA]
¡û
>W1710735668
LGHL01000346
Alphaproteobacteria
Bradyrhizobium sp. NAS80.1 [LGHL]
3607
3681
+
Thr
GGT
[ENA]
¡û
>W1710735684
LGHM01000047
Alphaproteobacteria
Bradyrhizobium sp. AS23.2 [LGHM]
46589
46515
-
Thr
GGT
[ENA]
¡û
Identical group No.698955 (7 seq.)
>WENV180636855
OCRF01085768
[OCRF] marine metagenome; niskin bottle
96
170
+
Thr
GGT
[ENA]
¢þ
>W141066896
ARYK01000001
Alphaproteobacteria
Hyphomonas johnsonii MHS-2 [ARYK]
127553
127479
-
Thr
GGT
[ENA]
¡û
>W141066935
ARYL01000010
Alphaproteobacteria
Hyphomonas oceanitis SCH89 [ARYL]
57699
57625
-
Thr
GGT
[ENA]
¡û
>W141136140
AWFG01000019
Alphaproteobacteria
Hyphomonas chukchiensis BH-BN04-4 [AWFG]
272708
272634
-
Thr
GGT
[ENA]
¡û
>SRA1040972
SRR035091.176225
454 Sequencing (SRP001812)
330
256
-
Thr
GGT
[SRA]
>W1511564538
LADU01000117
Alphaproteobacteria
Hyphomonas sp. BRH_c22 [LADU]
16040
15966
-
Thr
GGT
[ENA]
¡û
>W1511564589
LADW01000037
Alphaproteobacteria
Hyphomonadaceae bacterium BRH_c29 [LADW]
32787
32713
-
Thr
GGT
[ENA]
¡û
Identical group No.710668 (2 seq.)
>WENV170605186
FUWD010457235
[FUWD] metagenome; unknown
733
659
-
Thr
GGT
[ENA]
¢þ
>SRA1042860
SRR035091.457163
454 Sequencing (SRP001812)
251
325
+
Thr
GGT
[SRA]
Identical group No.710817 (2 seq.)
>WENV170608136
FUWD010895807
[FUWD] metagenome; unknown
309
233
-
Thr
GGT
[ENA]
¢þ
>SRA1041746
SRR035091.286488
454 Sequencing (SRP001812)
309
233
-
Thr
GGT
[SRA]
Identical group No.711068 (3 seq.)
>WENV170612360
FUWD012587887
[FUWD] metagenome; unknown
168
242
+
Thr
GGT
[ENA]
¢þ
>SRA1037505
SRR035090.143464
454 Sequencing (SRP001811)
178
252
+
Thr
GGT
[SRA]
>SRA1041461
SRR035091.244900
454 Sequencing (SRP001812)
306
232
-
Thr
GGT
[SRA]
Identical group No.711565 (5 seq.)
>WENV170627122
FUWD013231498
[FUWD] metagenome; unknown
4957
5031
+
Thr
GGT
[ENA]
¢þ
>WENV170629815
FUWD013282622
[FUWD] metagenome; unknown
9437
9511
+
Thr
GGT
[ENA]
¢þ
>SRA1017025
SRR035082.69771
454 Sequencing (SRP001803)
253
327
+
Thr
GGT
[SRA]
>SRA1042531
SRR035091.403484
454 Sequencing (SRP001812)
77
3
-
Thr
GGT
[SRA]
>SRA1044368
SRR035092.267165
454 Sequencing (SRP001813)
423
349
-
Thr
GGT
[SRA]
Identical group No.726964 (1 seq.)
>SRA1040245
SRR035091.64698
454 Sequencing (SRP001812)
221
147
-
Thr
GGT
[SRA]
Identical group No.727007 (2 seq.)
>SRA1040613
SRR035091.122596
454 Sequencing (SRP001812)
200
126
-
Thr
GGT
[SRA]
>SRA1042170
SRR035091.349521
454 Sequencing (SRP001812)
163
89
-
Thr
GGT
[SRA]
Identical group No.727120 (1 seq.)
>SRA1042126
SRR035091.342857
454 Sequencing (SRP001812)
444
370
-
Thr
GGT
[SRA]
Identical group No.727160 (1 seq.)
>SRA1042682
SRR035091.428893
454 Sequencing (SRP001812)
295
367
+
Thr
GGT
[SRA]
Identical group No.812782 (1 seq.)
>SRA1042294
SRR035091.368951
454 Sequencing (SRP001812)
301
374
+
Thr
GGT
[SRA]
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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