tRNA genes clustered and arranged according to each identical group

Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)

Anticodon = CAT

HIT: 14 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.166742 (3 seq.)
>WENV181145647 OEHO01374356 [OEHO] metagenome; unknown 126 201 + Met CAT [ENA] ¢þ
>WENV170779123 LZCG01001238 [LZCG] oil field metagenome; sample BH-FW-1 from oil reservoir 560 486 - Met CAT [ENA] ¢þ
>SRA1002529 SRR001325.103422 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 83 9 - Met CAT [SRA]
Identical group No.173244 (1 seq.)
>SRA1002353 SRR001322.58866 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 28 104 + Met CAT [SRA]
Identical group No.224373 (21 seq.)
>WENV170227581 CEQF01106571 [CEQF] marine metagenome genome assembly TARA_068_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 518 594 + Met CAT [ENA] ¢þ
>WENV170372010 CETS01057627 [CETS] marine metagenome genome assembly TARA_122_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 464 540 + Met CAT [ENA] ¢þ
>WENV170387790 CETZ01012706 [CETZ] marine metagenome genome assembly TARA_132_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 336 412 + Met CAT [ENA] ¢þ
>WENV170415907 CEUL01079304 [CEUL] marine metagenome genome assembly TARA_124_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 238 162 - Met CAT [ENA] ¢þ
>WENV170416464 CEUL01129507 [CEUL] marine metagenome genome assembly TARA_124_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2832 2756 - Met CAT [ENA] ¢þ
>WENV170422638 CEUN01173929 [CEUN] marine metagenome genome assembly TARA_124_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 611 687 + Met CAT [ENA] ¢þ
>WENV170445713 CEUY01059893 [CEUY] marine metagenome genome assembly TARA_123_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 557 481 - Met CAT [ENA] ¢þ
>WENV170452831 CEUZ01282274 [CEUZ] marine metagenome genome assembly TARA_125_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3287 3363 + Met CAT [ENA] ¢þ
>WENV170455062 CEVA01080668 [CEVA] marine metagenome genome assembly TARA_125_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 126 202 + Met CAT [ENA] ¢þ
>WENV170488421 CEVO01205264 [CEVO] marine metagenome genome assembly TARA_152_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 174 98 - Met CAT [ENA] ¢þ
>WENV170538305 CEWR01068393 [CEWR] marine metagenome genome assembly TARA_085_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 188 112 - Met CAT [ENA] ¢þ
>WENV170611131 FUWD012212272 [FUWD] metagenome; unknown 122 46 - Met CAT [ENA] ¢þ
>WENV170666094 JYMV01033322 [JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean 9762 9686 - Met CAT [ENA] ¢þ
>WENV170667268 JYMV01045436 [JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean 4512 4588 + Met CAT [ENA] ¢þ
>WENV170667281 JYMV01045585 [JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean 9640 9564 - Met CAT [ENA] ¢þ
>WENV170748247 LUMD01008910 [LUMD] marine metagenome; Red Sea water column Station 34 - depth 258m 287 211 - Met CAT [ENA] ¢þ
>WENV170753924 LUMK01017163 [LUMK] marine metagenome; Red Sea water column Station 22 - depth 200m 157 81 - Met CAT [ENA] ¢þ
>WENV170809537 MDSW01133843 [MDSW] marine metagenome; seawater 2966 3042 + Met CAT [ENA] ¢þ
>SRA1002461 SRR001324.34939 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 115 39 - Met CAT [SRA]
>W1610599268 LFLA01000020 Nitrospinota Nitrospina sp. LS_NOB [LFLA] 26937 27013 + Met CAT [ENA] ¡û
>W1710720700 LFLA01000020 Nitrospinota Nitrospina sp. LS_NOB [LFLA] 26937 27013 + Met CAT [ENA] ¡û
Identical group No.349334 (1 seq.)
>SRA1002494 SRR001325.9626 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 77 4 - Met CAT [SRA]
Identical group No.385134 (1 seq.)
>SRA1002351 SRR001322.54555 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 27 102 + Met CAT [SRA]
Identical group No.385135 (1 seq.)
>SRA1002362 SRR001322.71991 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 104 29 - Met CAT [SRA]
Identical group No.391986 (1 seq.)
>SRA1002440 SRR001323.149686 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 40 114 + Met CAT [SRA]
Identical group No.409795 (15 seq.)
>W141289726 JARN01000034 Chloroflexota Dehalococcoidia bacterium DscP2 [JARN] 22284 22210 - Met CAT [ENA] ¡û
>WENV170017307 BART01010872 [BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula 73 1 - Met CAT [ENA] ¢þ
>WENV170017729 BARU01018546 [BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula 212 284 + Met CAT [ENA] ¢þ
>WENV170018000 BARV01003285 [BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula 1017 1089 + Met CAT [ENA] ¢þ
>WENV170018133 BARV01017924 [BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula 642 570 - Met CAT [ENA] ¢þ
>WENV170018198 BARV01024079 [BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula 228 156 - Met CAT [ENA] ¢þ
>WENV170018221 BARV01026516 [BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula 376 448 + Met CAT [ENA] ¢þ
>WENV170018328 BARW01001757 [BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula 803 731 - Met CAT [ENA] ¢þ
>WENV170209593 CEPV01073035 [CEPV] marine metagenome genome assembly TARA_039_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2351 2425 + Met CAT [ENA] ¢þ
>WENV170647754 JREQ01004007 [JREQ] marine sediment metagenome; clay from marine sediments 31 meters below sea floor depth collected from drilling site U1352C 1167 1239 + Met CAT [ENA] ¢þ
>WENV170648082 JRER01004361 [JRER] marine sediment metagenome; clay from marine sediments 136 meters below sea floor depth collected from drilling site U1352C 1930 2004 + Met CAT [ENA] ¢þ
>SRA1002406 SRR001323.61612 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 20 92 + Met CAT [SRA]
>SRA1002415 SRR001323.87094 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 20 92 + Met CAT [SRA]
>SRA1002454 SRR001324.21346 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 19 90 + Met CAT [SRA]
>SRA1002481 SRR001324.72716 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 19 90 + Met CAT [SRA]
Identical group No.409812 (6 seq.)
>WENV183798650 PVBE010436673 [PVBE] marine metagenome; water 542 470 - Ile2 CAT [ENA] ¢þ
>WENV170017272 BART01006538 [BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula 1468 1540 + Met CAT [ENA] ¢þ
>WENV170018078 BARV01010189 [BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula 266 338 + Met CAT [ENA] ¢þ
>WENV170018388 BARW01007724 [BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula 80 8 - Met CAT [ENA] ¢þ
>WENV170018497 BARW01028631 [BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula 250 178 - Met CAT [ENA] ¢þ
>SRA1002534 SRR001325.117198 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 89 17 - Met CAT [SRA]
Identical group No.419811 (10 seq.)
>WENV180072151 MPMA02004037 [MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter 573 647 + fMet CAT [ENA] ¢þ
>WENV181414072 OGCK01212774 [OGCK] hot springs metagenome; hot spring sediment 481 407 - fMet CAT [ENA] ¢þ
>WENV183678401 ORJL011874783 [ORJL] groundwater metagenome; groundwater 175 101 - Arg CCT [ENA] ¢þ
>WENV183807163 PVBE011176323 [PVBE] marine metagenome; water 1021 1095 + fMet CAT [ENA] ¢þ
>WENV170225495 CEQE01140617 [CEQE] marine metagenome genome assembly TARA_037_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 600 526 - Met CAT [ENA] ¢þ
>WENV170607665 FUWD010845993 [FUWD] metagenome; unknown 222 148 - Met CAT [ENA] ¢þ
>SRA1002513 SRR001325.69608 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 42 113 + Met CAT [SRA]
>SRA1002524 SRR001325.91148 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 42 113 + Met CAT [SRA]
>SRA1013422 SRR023396.15870 Brazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095) 75 149 + Met CAT [SRA]
>SRA1018703 SRR035082.335203 454 Sequencing (SRP001803) 430 356 - Met CAT [SRA]
Identical group No.447955 (2 seq.)
>W141289724 JARN01000033 Chloroflexota Dehalococcoidia bacterium DscP2 [JARN] 3568 3640 + Met CAT [ENA] ¡û
>SRA1002455 SRR001324.23157 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 24 96 + Met CAT [SRA]
Identical group No.460983 (50 seq.)
>WENV180074288 MPMA02133964 [MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter 113 187 + fMet CAT [ENA] ¢þ
>WENV180249735 OBEQ010226731 [OBEQ] groundwater metagenome; groundwater 3134 3060 - fMet CAT [ENA] ¢þ
>WENV180258314 OBEQ010996344 [OBEQ] groundwater metagenome; groundwater 435 361 - fMet CAT [ENA] ¢þ
>WENV180262008 OBEQ011347221 [OBEQ] groundwater metagenome; groundwater 1806 1732 - fMet CAT [ENA] ¢þ
>WENV180262273 OBEQ011371978 [OBEQ] groundwater metagenome; groundwater 574 500 - fMet CAT [ENA] ¢þ
>WENV180262275 OBEQ011372061 [OBEQ] groundwater metagenome; groundwater 4 78 + fMet CAT [ENA] ¢þ
>WENV180266352 OBEQ011745899 [OBEQ] groundwater metagenome; groundwater 1141 1067 - fMet CAT [ENA] ¢þ
>WENV180273028 OBEQ012441577 [OBEQ] groundwater metagenome; groundwater 333 407 + fMet CAT [ENA] ¢þ
>WENV181305120 OFIF01005190 [OFIF] marine metagenome; seawater 577 503 - fMet CAT [ENA] ¢þ
>WENV181305571 OFIH01000304 [OFIH] marine metagenome; seawater 280 206 - fMet CAT [ENA] ¢þ
>WENV181313257 OFJF01006877 [OFJF] marine metagenome; seawater 295 369 + fMet CAT [ENA] ¢þ
>WENV181316341 OFJT01020386 [OFJT] marine metagenome; seawater 312 238 - fMet CAT [ENA] ¢þ
>WENV181403547 OFUB01002232 [OFUB] marine metagenome; seawater 1497 1571 + fMet CAT [ENA] ¢þ
>WENV181409174 OGCI01000022 [OGCI] hot springs metagenome; Hot spring water 107094 107020 - fMet CAT [ENA] ¢þ
>WENV183660167 ORJL010000836 [ORJL] groundwater metagenome; groundwater 1291 1365 + fMet CAT [ENA] ¢þ
>WENV183660290 ORJL010012316 [ORJL] groundwater metagenome; groundwater 833 759 - fMet CAT [ENA] ¢þ
>WENV183664287 ORJL010363304 [ORJL] groundwater metagenome; groundwater 467 393 - fMet CAT [ENA] ¢þ
>WENV183667994 ORJL010701220 [ORJL] groundwater metagenome; groundwater 1176 1250 + fMet CAT [ENA] ¢þ
>WENV183669393 ORJL010835544 [ORJL] groundwater metagenome; groundwater 4726 4652 - fMet CAT [ENA] ¢þ
>WENV183671681 ORJL011088629 [ORJL] groundwater metagenome; groundwater 2 76 + fMet CAT [ENA] ¢þ
>WENV183671734 ORJL011093301 [ORJL] groundwater metagenome; groundwater 10050 9976 - fMet CAT [ENA] ¢þ
>WENV183672997 ORJL011232282 [ORJL] groundwater metagenome; groundwater 145 219 + fMet CAT [ENA] ¢þ
>WENV183673003 ORJL011232682 [ORJL] groundwater metagenome; groundwater 617 691 + fMet CAT [ENA] ¢þ
>WENV183673027 ORJL011235789 [ORJL] groundwater metagenome; groundwater 74 1 - fMet CAT [ENA] ¢þ
>WENV183673206 ORJL011255590 [ORJL] groundwater metagenome; groundwater 3655 3581 - fMet CAT [ENA] ¢þ
>WENV183673846 ORJL011324631 [ORJL] groundwater metagenome; groundwater 1857 1783 - fMet CAT [ENA] ¢þ
>WENV183674391 ORJL011380912 [ORJL] groundwater metagenome; groundwater 1226 1300 + fMet CAT [ENA] ¢þ
>WENV183675818 ORJL011553482 [ORJL] groundwater metagenome; groundwater 248 322 + fMet CAT [ENA] ¢þ
>WENV183676395 ORJL011618072 [ORJL] groundwater metagenome; groundwater 999 925 - fMet CAT [ENA] ¢þ
>WENV183676765 ORJL011666804 [ORJL] groundwater metagenome; groundwater 1522 1593 + fMet CAT [ENA] ¢þ
>WENV183677670 ORJL011785860 [ORJL] groundwater metagenome; groundwater 77 3 - fMet CAT [ENA] ¢þ
>WENV183677686 ORJL011788426 [ORJL] groundwater metagenome; groundwater 72 146 + fMet CAT [ENA] ¢þ
>WENV183678742 ORJL011916663 [ORJL] groundwater metagenome; groundwater 8245 8171 - fMet CAT [ENA] ¢þ
>WENV183682940 ORMF010509475 [ORMF] groundwater metagenome; groundwater 2279 2205 - fMet CAT [ENA] ¢þ
>WENV183684647 ORMF010735881 [ORMF] groundwater metagenome; groundwater 62 136 + fMet CAT [ENA] ¢þ
>WENV183685340 ORMF010833364 [ORMF] groundwater metagenome; groundwater 44 118 + fMet CAT [ENA] ¢þ
>WENV170171859 CEOQ01078371 [CEOQ] marine metagenome genome assembly TARA_034_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 190 116 - Met CAT [ENA] ¢þ
>WENV170214676 CEPX01100904 [CEPX] marine metagenome genome assembly TARA_037_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 378 452 + Met CAT [ENA] ¢þ
>WENV170227812 CEQF01138739 [CEQF] marine metagenome genome assembly TARA_068_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 378 452 + Met CAT [ENA] ¢þ
>WENV170278509 CERQ01104556 [CERQ] marine metagenome genome assembly TARA_065_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 314 240 - Met CAT [ENA] ¢þ
>WENV170382867 CETX01051918 [CETX] marine metagenome genome assembly TARA_138_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 394 468 + Met CAT [ENA] ¢þ
>WENV170394971 CEUC01072136 [CEUC] marine metagenome genome assembly TARA_137_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3708 3634 - Met CAT [ENA] ¢þ
>WENV170476918 CEVJ01004673 [CEVJ] marine metagenome genome assembly TARA_146_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 200 274 + Met CAT [ENA] ¢þ
>WENV170487752 CEVO01088330 [CEVO] marine metagenome genome assembly TARA_152_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 213 287 + Met CAT [ENA] ¢þ
>WENV170492131 CEVQ01121839 [CEVQ] marine metagenome genome assembly TARA_148b_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 356 430 + Met CAT [ENA] ¢þ
>WENV170642405 JFJP01040924 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 443 369 - Met CAT [ENA] ¢þ
>WENV170736849 LULM01041505 [LULM] marine metagenome; Red Sea water column Station 149 - depth 200m 463 389 - Met CAT [ENA] ¢þ
>SRA1002379 SRR001322.121696 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 98 24 - Met CAT [SRA]
>SRA1017321 SRR035082.119174 454 Sequencing (SRP001803) 222 148 - Met CAT [SRA]
>SRA1018313 SRR035082.271853 454 Sequencing (SRP001803) 258 184 - Met CAT [SRA]
Identical group No.469170 (1 seq.)
>SRA1002366 SRR001322.84452 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 48 119 + Met CAT [SRA]
Identical group No.475554 (2 seq.)
>SRA1002395 SRR001323.43298 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 80 6 - Met CAT [SRA]
>SRA1002416 SRR001323.88159 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 80 6 - Met CAT [SRA]
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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