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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
85 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183708533
PDWI01017111
38355
Actinomycetota
GAG
Leu
>WENV183716236
PDWI01296237
347986
Actinomycetota
CAC
Val
>WENV183715722
PDWI01258892
243300
Actinomycetota
CAC
Val
>WENV183713219
PDWI01129133
288165
Actinomycetota
CTC
Glu
>WENV183711526
PDWI01072065
28406
Actinomycetota
CGA
Ser
>WENV183711372
PDWI01068192
345178
Actinomycetota
CTG
Gln
>WENV183705490
PDWI01001658
417936
Actinomycetota
TCC
Gly
>WENV183710192
PDWI01041444
343168
Actinomycetota
CCG
Arg
>WENV183708614
PDWI01018006
343168
Actinomycetota
CCG
Arg
>WENV183710734
PDWI01052592
254663
Actinomycetota
TAC
Val
>WENV183711063
PDWI01060426
158373
Actinomycetota
GGG
Pro
>WENV183715190
PDWI01226265
413688
Actinomycetota
CCC
Gly
>WENV183713121
PDWI01125227
411680
Actinomycetota
TCC
Gly
>WENV183711771
PDWI01079959
411680
Actinomycetota
TCC
Gly
>WENV183713481
PDWI01140039
235734
Actinomycetota
>WENV183704722
PDWI01000545
358605
Actinomycetota
CTG
Gln
>WENV183705569
PDWI01001837
266818
Actinomycetota
CTT
Lys
>WENV183704298
PDWI01000138
255841
Actinomycetota
CCA
Trp
>WENV183713483
PDWI01140039
339641
Actinomycetota
GAC
Val
>WENV183704034
PDWI01000007
246789
Actinomycetota
CCT
Arg
>WENV183704507
PDWI01000316
174437
Actinomycetota
CAC
Val
>WENV183711560
PDWI01072998
243603
Actinomycetota
ACG
Arg
>WENV183704139
PDWI01000048
243603
Actinomycetota
ACG
Arg
>WENV183713128
PDWI01125629
155366
Actinomycetota
GAA
Phe
>WENV183711461
PDWI01070288
155366
Actinomycetota
GAA
Phe
>WENV183706016
PDWI01002921
155366
Actinomycetota
GAA
Phe
>WENV183704612
PDWI01000402
416034
Actinomycetota
TCC
Gly
>WENV183705491
PDWI01001658
164443
Actinomycetota
TGG
Pro
>WENV183712438
PDWI01099907
428901
Actinomycetota
CCC
Gly
>WENV183712112
PDWI01089375
162442
Actinomycetota
GAT
Ile
>WENV183705146
PDWI01001135
162442
Actinomycetota
GAT
Ile
>WENV183715513
PDWI01244871
277211
Actinomycetota
TTC
Glu
>WENV183711459
PDWI01070288
277211
Actinomycetota
TTC
Glu
>WENV183711335
PDWI01066889
277211
Actinomycetota
TTC
Glu
>WENV183706014
PDWI01002921
277211
Actinomycetota
TTC
Glu
>WENV183704045
PDWI01000011
277211
Actinomycetota
TTC
Glu
>WENV183712043
PDWI01086770
105949
Actinomycetota
TAG
Leu
>WENV183714389
PDWI01181284
121559
Actinomycetota
>WENV183706012
PDWI01002921
121559
Actinomycetota
>WENV183716234
PDWI01296237
411681
Actinomycetota
GCA
Cys
>WENV183716071
PDWI01283800
246299
Actinomycetota
CTT
Lys
>WENV183715943
PDWI01275804
246299
Actinomycetota
CTT
Lys
>WENV183715451
PDWI01241498
246299
Actinomycetota
CTT
Lys
>WENV183710187
PDWI01041319
246299
Actinomycetota
CTT
Lys
>WENV183714022
PDWI01164056
260823
Actinomycetota
TGC
Ala
>WENV183712660
PDWI01108915
260823
Actinomycetota
TGC
Ala
>WENV183715420
PDWI01239412
421345
Actinomycetota
CCC
Gly
>WENV183715346
PDWI01234486
421345
Actinomycetota
CCC
Gly
>WENV183714403
PDWI01182075
421345
Actinomycetota
CCC
Gly
>WENV183713489
PDWI01140369
62910
Actinomycetota
CAG
Leu
>WENV183707388
PDWI01008199
412384
Actinomycetota
CCC
Gly
>WENV183710912
PDWI01056263
236214
Actinomycetota
CCA
Trp
>WENV183712765
PDWI01113093
97617
Actinomycetota
GTA
Tyr
>WENV183710392
PDWI01045557
97617
Actinomycetota
GTA
Tyr
>WENV183715122
PDWI01222259
412399
Actinomycetota
CCC
Gly
>WENV183711072
PDWI01060554
277213
Actinomycetota
CGT
Thr
>WENV183709550
PDWI01029910
277213
Actinomycetota
CGT
Thr
>WENV183708868
PDWI01020777
277213
Actinomycetota
CGT
Thr
>WENV183715726
PDWI01259408
80899
Actinomycetota
CAG
Leu
>WENV183712927
PDWI01119126
80899
Actinomycetota
CAG
Leu
>WENV183710391
PDWI01045557
80899
Actinomycetota
CAG
Leu
>WENV183713446
PDWI01138932
114484
Actinomycetota
GTA
Tyr
>WENV183704295
PDWI01000138
114484
Actinomycetota
GTA
Tyr
>WENV183705482
PDWI01001643
237116
Actinomycetota
CGT
Thr
>WENV183712382
PDWI01098076
246806
Actinomycetota
TGT
Thr
>WENV183710006
PDWI01038010
246806
Actinomycetota
TGT
Thr
>WENV183707984
PDWI01012023
246806
Actinomycetota
TGT
Thr
>WENV183716235
PDWI01296237
375009
Actinomycetota
GAC
Val
>WENV183711943
PDWI01084344
354545
Actinomycetota
CCG
Arg
>WENV183712779
PDWI01113647
240124
Actinomycetota
CGT
Thr
>WENV183712638
PDWI01107906
240124
Actinomycetota
CGT
Thr
>WENV183704817
PDWI01000664
266820
Actinomycetota
TAC
Val
>WENV183712648
PDWI01108294
377770
Actinomycetota
CTG
Gln
>WENV183709157
PDWI01024691
345176
Actinomycetota
CCG
Arg
>WENV183706822
PDWI01005618
345176
Actinomycetota
CCG
Arg
>WENV183713576
PDWI01143248
179547
Actinomycetota
GGG
Pro
>WENV183708569
PDWI01017449
179547
Actinomycetota
GGG
Pro
>WENV183707811
PDWI01010787
339857
Actinomycetota
CTG
Gln
>WENV183716321
PDWI01301005
294101
Actinomycetota
GGT
Thr
>WENV183713386
PDWI01136266
294101
Actinomycetota
GGT
Thr
>WENV183704504
PDWI01000316
254531
Actinomycetota
>WENV183709269
PDWI01026266
251343
Actinomycetota
CGC
Ala
>WENV183706739
PDWI01005365
251343
Actinomycetota
CGC
Ala
>WENV183712138
PDWI01090171
344380
Actinomycetota
GAC
Val
>WENV183704063
PDWI01000016
82645
Actinomycetota
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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