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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
75 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183719234
PDWJ01010948
38355
Actinomycetota
GAG
Leu
>WENV183717703
PDWJ01001417
347986
Actinomycetota
CAC
Val
>WENV183720742
PDWJ01043511
288165
Actinomycetota
CTC
Glu
>WENV183720832
PDWJ01046851
240126
Actinomycetota
GTG
His
>WENV183721287
PDWJ01062560
28406
Actinomycetota
CGA
Ser
>WENV183717705
PDWJ01001424
345178
Actinomycetota
CTG
Gln
>WENV183719017
PDWJ01008798
390230
Actinomycetota
CCG
Arg
>WENV183721900
PDWJ01093545
246840
Actinomycetota
CAC
Val
>WENV183721630
PDWJ01077835
193205
Actinomycetota
GAT
Ile
>WENV183721665
PDWJ01079560
254663
Actinomycetota
TAC
Val
>WENV183720479
PDWJ01035256
158373
Actinomycetota
GGG
Pro
>WENV183721280
PDWJ01062378
413688
Actinomycetota
CCC
Gly
>WENV183721046
PDWJ01053347
149272
Actinomycetota
TTT
Lys
>WENV183722627
PDWJ01143923
411680
Actinomycetota
TCC
Gly
>WENV183721509
PDWJ01073183
411680
Actinomycetota
TCC
Gly
>WENV183717876
PDWJ01001849
235734
Actinomycetota
>WENV183721898
PDWJ01093545
412871
Actinomycetota
GCA
Cys
>WENV183717878
PDWJ01001849
339641
Actinomycetota
GAC
Val
>WENV183722382
PDWJ01124133
246789
Actinomycetota
CCT
Arg
>WENV183721060
PDWJ01053698
246789
Actinomycetota
CCT
Arg
>WENV183720983
PDWJ01051245
246789
Actinomycetota
CCT
Arg
>WENV183720206
PDWJ01029008
154640
Actinomycetota
CTT
Lys
>WENV183720663
PDWJ01040898
415620
Actinomycetota
TCC
Gly
>WENV183720313
PDWJ01031370
149271
Actinomycetota
CAT
Met
>WENV183722065
PDWJ01103547
174437
Actinomycetota
CAC
Val
>WENV183719951
PDWJ01023770
174437
Actinomycetota
CAC
Val
>WENV183718849
PDWJ01006964
155366
Actinomycetota
GAA
Phe
>WENV183721351
PDWJ01065403
416034
Actinomycetota
TCC
Gly
>WENV183720302
PDWJ01031129
416034
Actinomycetota
TCC
Gly
>WENV183719854
PDWJ01021823
416034
Actinomycetota
TCC
Gly
>WENV183721899
PDWJ01093545
392594
Actinomycetota
GAC
Val
>WENV183720044
PDWJ01025274
392594
Actinomycetota
GAC
Val
>WENV183721337
PDWJ01064970
162442
Actinomycetota
GAT
Ile
>WENV183719787
PDWJ01020349
162442
Actinomycetota
GAT
Ile
>WENV183719161
PDWJ01010298
162442
Actinomycetota
GAT
Ile
>WENV183722456
PDWJ01130572
277211
Actinomycetota
TTC
Glu
>WENV183720848
PDWJ01047275
277211
Actinomycetota
TTC
Glu
>WENV183718847
PDWJ01006964
277211
Actinomycetota
TTC
Glu
>WENV183718155
PDWJ01002627
121559
Actinomycetota
>WENV183717701
PDWJ01001417
411681
Actinomycetota
GCA
Cys
>WENV183722214
PDWJ01112022
246299
Actinomycetota
CTT
Lys
>WENV183719772
PDWJ01019999
246299
Actinomycetota
CTT
Lys
>WENV183718874
PDWJ01007343
246299
Actinomycetota
CTT
Lys
>WENV183721893
PDWJ01093187
372831
Actinomycetota
CTG
Gln
>WENV183721683
PDWJ01080432
372831
Actinomycetota
CTG
Gln
>WENV183721394
PDWJ01067096
372831
Actinomycetota
CTG
Gln
>WENV183721681
PDWJ01080057
246222
Actinomycetota
CCG
Arg
>WENV183719788
PDWJ01020349
260823
Actinomycetota
TGC
Ala
>WENV183718733
PDWJ01006217
260823
Actinomycetota
TGC
Ala
>WENV183721773
PDWJ01085156
421345
Actinomycetota
CCC
Gly
>WENV183721666
PDWJ01079566
421345
Actinomycetota
CCC
Gly
>WENV183720157
PDWJ01027869
37359
Actinomycetota
>WENV183719383
PDWJ01013481
149270
Actinomycetota
GTC
Asp
>WENV183718895
PDWJ01007467
345170
Actinomycetota
TTG
Gln
>WENV183721273
PDWJ01061881
236214
Actinomycetota
CCA
Trp
>WENV183720504
PDWJ01035911
345027
Actinomycetota
GTT
Asn
>WENV183718893
PDWJ01007445
97617
Actinomycetota
GTA
Tyr
>WENV183718411
PDWJ01003886
44903
Actinomycetota
GAG
Leu
>WENV183721214
PDWJ01059389
80899
Actinomycetota
CAG
Leu
>WENV183718892
PDWJ01007445
80899
Actinomycetota
CAG
Leu
>WENV183720180
PDWJ01028566
114484
Actinomycetota
GTA
Tyr
>WENV183722495
PDWJ01134243
246806
Actinomycetota
TGT
Thr
>WENV183718164
PDWJ01002643
246806
Actinomycetota
TGT
Thr
>WENV183718163
PDWJ01002639
246806
Actinomycetota
TGT
Thr
>WENV183718596
PDWJ01005279
59716
Actinomycetota
CAG
Leu
>WENV183722053
PDWJ01102484
345177
Actinomycetota
CAC
Val
>WENV183717875
PDWJ01001849
345177
Actinomycetota
CAC
Val
>WENV183719104
PDWJ01009726
240124
Actinomycetota
CGT
Thr
>WENV183717175
PDWJ01000539
345176
Actinomycetota
CCG
Arg
>WENV183719434
PDWJ01014111
179547
Actinomycetota
GGG
Pro
>WENV183719874
PDWJ01021980
254531
Actinomycetota
>WENV183717635
PDWJ01001262
251343
Actinomycetota
CGC
Ala
>WENV183720436
PDWJ01034417
82645
Actinomycetota
GAG
Leu
>WENV183719665
PDWJ01018158
82645
Actinomycetota
GAG
Leu
>WENV183721062
PDWJ01053844
412870
Actinomycetota
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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