This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1023613
SRR035084.136780
443526
Actinomycetota
CAC
Val
>SRA1024869
SRR035084.425019
443526
Actinomycetota
CAC
Val
>SRA1024006
SRR035084.227371
307128
Actinomycetota
CCA
Trp
>SRA1024583
SRR035084.354188
307128
Actinomycetota
CCA
Trp
>SRA1024968
SRR035084.448891
307128
Actinomycetota
CCA
Trp
>SRA1024989
SRR035084.454422
307128
Actinomycetota
CCA
Trp
>SRA1024355
SRR035084.306469
191257
Actinomycetota
CGG
Pro
>SRA1024474
SRR035084.333093
191257
Actinomycetota
CGG
Pro
>SRA1025100
SRR035084.484263
298505
Actinomycetota
CTC
Glu
>SRA1024175
SRR035084.266994
405556
Actinomycetota
CTG
Gln
>SRA1025099
SRR035084.484263
405556
Actinomycetota
CTG
Gln
>SRA1025266
SRR035084.534455
405556
Actinomycetota
CTG
Gln
>SRA1023185
SRR035084.30991
223227
Actinomycetota
GAT
Ile
>SRA1023493
SRR035084.110642
223227
Actinomycetota
GAT
Ile
>SRA1024704
SRR035084.380461
223227
Actinomycetota
GAT
Ile
>SRA1024909
SRR035084.434105
223227
Actinomycetota
GAT
Ile
>SRA1025292
SRR035084.543285
223227
Actinomycetota
GAT
Ile
>SRA1024185
SRR035084.268151
491020
Actinomycetota
GCA
Cys
>SRA1023501
SRR035084.112166
480761
Actinomycetota
GCA
Cys
>SRA1024442
SRR035084.325334
480761
Actinomycetota
GCA
Cys
>SRA1024184
SRR035084.268151
412280
Actinomycetota
GCC
Gly
>SRA1024665
SRR035084.372476
405704
Actinomycetota
GCC
Gly
>SRA1025178
SRR035084.509315
405704
Actinomycetota
GCC
Gly
>SRA1023335
SRR035084.73123
56361
Actinomycetota
GGA
Ser
>SRA1024365
SRR035084.308484
56361
Actinomycetota
GGA
Ser
>SRA1025008
SRR035084.457472
56361
Actinomycetota
GGA
Ser
>SRA1025112
SRR035084.487158
56361
Actinomycetota
GGA
Ser
>SRA1025156
SRR035084.501337
56361
Actinomycetota
GGA
Ser
>SRA1025180
SRR035084.509506
56361
Actinomycetota
GGA
Ser
>SRA1025334
SRR035084.554868
58234
Actinomycetota
GGA
Ser
>SRA1023634
SRR035084.139304
281661
Actinomycetota
TAC
Val
>SRA1024019
SRR035084.231317
281661
Actinomycetota
TAC
Val
>SRA1024775
SRR035084.398526
281661
Actinomycetota
TAC
Val
>SRA1023514
SRR035084.114562
481421
Actinomycetota
TCC
Gly
>SRA1024040
SRR035084.235416
481421
Actinomycetota
TCC
Gly
>SRA1023186
SRR035084.30991
291869
Actinomycetota
TGC
Ala
>SRA1024705
SRR035084.380461
291869
Actinomycetota
TGC
Ala
>SRA1025229
SRR035084.522539
291869
Actinomycetota
TGC
Ala
>SRA1023859
SRR035084.192163
191455
Actinomycetota
TGG
Pro
>SRA1024421
SRR035084.320024
191455
Actinomycetota
TGG
Pro
>SRA1025393
SRR035084.578795
191455
Actinomycetota
TGG
Pro
>SRA1025407
SRR035084.583307
191455
Actinomycetota
TGG
Pro
>SRA1023823
SRR035084.184670
340854
Actinomycetota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK