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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183726208
PJQF01118894
339149
Alphaproteobacteria
GTT
Asn
>WENV183726391
PJQF01182676
96031
Alphaproteobacteria
TAG
Leu
>WENV183725866
PJQF01028407
24760
Alphaproteobacteria
TGA
Ser
>WENV183726216
PJQF01122347
146864
Alphaproteobacteria
TGG
Pro
>WENV183726225
PJQF01125741
97676
Alphaproteobacteria
CAG
Leu
>WENV183725925
PJQF01039605
339325
Alphaproteobacteria
CAC
Val
>WENV183726259
PJQF01140190
81091
Alphaproteobacteria
GTA
Tyr
>WENV183726019
PJQF01060479
95928
Alphaproteobacteria
TAG
Leu
>WENV183726239
PJQF01132745
23560
Alphaproteobacteria
CGA
Ser
>WENV183725809
PJQF01019658
338631
Alphaproteobacteria
CAC
Val
>WENV183726442
PJQF01200549
339457
Alphaproteobacteria
>WENV183725955
PJQF01047608
243630
Alphaproteobacteria
GAA
Phe
>WENV183726471
PJQF01215574
61759
Alphaproteobacteria
GAG
Leu
>WENV183725945
PJQF01043391
23627
Alphaproteobacteria
GGA
Ser
>WENV183726171
PJQF01100926
23807
Alphaproteobacteria
CGA
Ser
>WENV183726020
PJQF01060749
345492
Alphaproteobacteria
TAC
Val
>WENV183726004
PJQF01058833
236004
Alphaproteobacteria
TTT
Lys
>WENV183725742
PJQF01011766
236004
Alphaproteobacteria
TTT
Lys
>WENV183726363
PJQF01173805
148429
Alphaproteobacteria
CCT
Arg
>WENV183726084
PJQF01077746
59118
Alphaproteobacteria
CAG
Leu
>WENV183726031
PJQF01063500
97145
Alphaproteobacteria
TAG
Leu
>WENV183725692
PJQF01008121
148854
Alphaproteobacteria
GTC
Asp
>WENV183725943
PJQF01042822
152510
Alphaproteobacteria
GGG
Pro
>WENV183725796
PJQF01017831
339465
Alphaproteobacteria
GGT
Thr
>WENV183725803
PJQF01018462
339436
Alphaproteobacteria
>WENV183726007
PJQF01059496
23611
Alphaproteobacteria
CGA
Ser
>WENV183726479
PJQF01218132
412153
Alphaproteobacteria
CTG
Gln
>WENV183725934
PJQF01040913
412560
Alphaproteobacteria
CTG
Gln
>WENV183726155
PJQF01095339
60995
Alphaproteobacteria
TAA
Leu
>WENV183725896
PJQF01032196
152444
Alphaproteobacteria
GGG
Pro
>WENV183726485
PJQF01219114
339464
Alphaproteobacteria
GCC
Gly
>WENV183726139
PJQF01092379
339464
Alphaproteobacteria
GCC
Gly
>WENV183726156
PJQF01095935
413302
Alphaproteobacteria
CCC
Gly
>WENV183726279
PJQF01145181
95925
Alphaproteobacteria
CAA
Leu
>WENV183725775
PJQF01015265
146852
Alphaproteobacteria
GTC
Asp
>WENV183726162
PJQF01097818
96061
Alphaproteobacteria
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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